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The map label for this gene is yrbE [C]

Identifier: 120609009

GI number: 120609009

Start: 339565

End: 340692

Strand: Direct

Name: yrbE [C]

Synonym: Aave_0306

Alternate gene names: 120609009

Gene position: 339565-340692 (Clockwise)

Preceding gene: 120609006

Following gene: 120609010

Centisome position: 6.34

GC content: 69.68

Gene sequence:

>1128_bases
ATGAGCGACAGCCCGCCCCGCATCGAACGCAACGACACGCCCGAAGGGCCAGTCGCCGCGCTGCACGGGCGCTGGGGCGC
GGCGGACCTGGGCGCGCGGCGCACCTGGCGCGAGGTGTCCGCGCAACTCGCGCAGAACGCGCCGGACTCCGGCCTGGGGT
GGGATCTGCGCAGCGTCGATTGGCTGGACCACGTCGGCGCGCAACTGCTCTGGAACCACTGGGGGCGCGTCTGGCCCGAA
CGGATCGCGCTCGACGATGCCCAGCGCGACATGCTCGATCGCGTGGCCGAATTCACCGTCATCGACCGGCCGCCCGTTCC
TCCCTGGCGCCTCGTCGAGGAAGTGGACCGCCTCGGCGTGAAGGTGCTGCACGCGCTCGGCCACGGCAGGCATTTGCTGG
AACTGGTGGGGCAACTGGTCATCGACCTCGGCAGTGCCTTGCGCGCACCGCGCCGCGCGCCCTGGCGCGACGTCTCGGGC
CACCTCTACCGCATGGGCGCCACGGCCCTGCCCATCACGGCCATCGTGGGCTTCCTGATCGGCGTGGTGCTGGCCTACCT
CATGAGCCTGCAACTGCGGCAGTTCGGCGCCGAGTCCTTCATCGTCAACATCCTGGGCATCTCGCTGATCCGGGAACTGG
GCCCCATGCTCGCGGCCATCCTCGTGGCGGGGCGGTCCGGTTCGGCCATCACGGCGCAGATCGGCGTCATGCGGGTCACC
GAGGAACTGGATGCCATGCGCGTCATGGGCATCCCGCACGGCTTCCGGCTGGTGATGCCGCGCGCCGTGGCACTCGCCAT
CGCCATGCCGCTCATCGCCGTCTGGACCACGCTGTGCGCCCTGGCCGGAGGCATGCTCGCGGCCGACATCGCCATGGACG
TATCGCCCGCCTACTTCGTGCAGGCGCTGCCCAACGCGGTGGGCTTCTCCAACCTCGTGCTCGCCATGGCGAAGTCGGTG
GTGTTCGGCGTCGGCATCGCGCTCATCGGCTGCCACTGGGGCCTGCGCGTGAAGCCCAACACCCAGAGCCTGGGCGAGGG
CACCACGGCTTCGGTGGTGAACGCCATCACCATGGTCATCATCGTGGACGCGCTCTTCGCGATCGCGTTCAAGAACCTCG
GGATCTAG

Upstream 100 bases:

>100_bases
TTCCGCGCTCCGCTAACATCCGGTTGCCGTTTCTGCGGTGTCCCCTTGCCGGTACTTTCCCGCCATTTTTTCCCGCGCCT
GCCTCCGTCCTGCCCTGCCC

Downstream 100 bases:

>100_bases
GCATGACGCGCGACGCAGCAGAAGACGCCATCGCCACCGGCCCCGCCGCCGCGCCCGAGCCGCCGCCGAAGGACGCGCCG
CCCGTGGTCGAGATCCGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MSDSPPRIERNDTPEGPVAALHGRWGAADLGARRTWREVSAQLAQNAPDSGLGWDLRSVDWLDHVGAQLLWNHWGRVWPE
RIALDDAQRDMLDRVAEFTVIDRPPVPPWRLVEEVDRLGVKVLHALGHGRHLLELVGQLVIDLGSALRAPRRAPWRDVSG
HLYRMGATALPITAIVGFLIGVVLAYLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVT
EELDAMRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMDVSPAYFVQALPNAVGFSNLVLAMAKSV
VFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVIIVDALFAIAFKNLGI

Sequences:

>Translated_375_residues
MSDSPPRIERNDTPEGPVAALHGRWGAADLGARRTWREVSAQLAQNAPDSGLGWDLRSVDWLDHVGAQLLWNHWGRVWPE
RIALDDAQRDMLDRVAEFTVIDRPPVPPWRLVEEVDRLGVKVLHALGHGRHLLELVGQLVIDLGSALRAPRRAPWRDVSG
HLYRMGATALPITAIVGFLIGVVLAYLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVT
EELDAMRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMDVSPAYFVQALPNAVGFSNLVLAMAKSV
VFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVIIVDALFAIAFKNLGI
>Mature_374_residues
SDSPPRIERNDTPEGPVAALHGRWGAADLGARRTWREVSAQLAQNAPDSGLGWDLRSVDWLDHVGAQLLWNHWGRVWPER
IALDDAQRDMLDRVAEFTVIDRPPVPPWRLVEEVDRLGVKVLHALGHGRHLLELVGQLVIDLGSALRAPRRAPWRDVSGH
LYRMGATALPITAIVGFLIGVVLAYLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVTE
ELDAMRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMDVSPAYFVQALPNAVGFSNLVLAMAKSVV
FGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVIIVDALFAIAFKNLGI

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=214, Percent_Identity=35.5140186915888, Blast_Score=111, Evalue=9e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 40425; Mature: 40294

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSPPRIERNDTPEGPVAALHGRWGAADLGARRTWREVSAQLAQNAPDSGLGWDLRSVD
CCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
WLDHVGAQLLWNHWGRVWPERIALDDAQRDMLDRVAEFTVIDRPPVPPWRLVEEVDRLGV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH
KVLHALGHGRHLLELVGQLVIDLGSALRAPRRAPWRDVSGHLYRMGATALPITAIVGFLI
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHH
GVVLAYLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVT
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
EELDAMRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMDVSPAYFV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH
QALPNAVGFSNLVLAMAKSVVFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHH
IVDALFAIAFKNLGI
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDSPPRIERNDTPEGPVAALHGRWGAADLGARRTWREVSAQLAQNAPDSGLGWDLRSVD
CCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
WLDHVGAQLLWNHWGRVWPERIALDDAQRDMLDRVAEFTVIDRPPVPPWRLVEEVDRLGV
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH
KVLHALGHGRHLLELVGQLVIDLGSALRAPRRAPWRDVSGHLYRMGATALPITAIVGFLI
HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHH
GVVLAYLMSLQLRQFGAESFIVNILGISLIRELGPMLAAILVAGRSGSAITAQIGVMRVT
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHH
EELDAMRVMGIPHGFRLVMPRAVALAIAMPLIAVWTTLCALAGGMLAADIAMDVSPAYFV
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHH
QALPNAVGFSNLVLAMAKSVVFGVGIALIGCHWGLRVKPNTQSLGEGTTASVVNAITMVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHH
IVDALFAIAFKNLGI
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]