| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is treA [H]
Identifier: 120608922
GI number: 120608922
Start: 240192
End: 241898
Strand: Direct
Name: treA [H]
Synonym: Aave_0217
Alternate gene names: 120608922
Gene position: 240192-241898 (Clockwise)
Preceding gene: 120608921
Following gene: 120608923
Centisome position: 4.49
GC content: 70.36
Gene sequence:
>1707_bases ATGATCCCTGCCGCTCCTTCCTGCCGCACCCCGCTGCTGAGCCTGGTGCTCGGCCTGTTGCTCGGCACCGCCGGCACCAC TGCCATGGCGGAGGCCGTGCCAGCGACGACGCTGACCGCGCCGGCGACGACGCTGACCGCGCCGGCACCGCCGCCGCAGA CCCCCGACCTGGCCTACCCGGAACTGTTTCAGGCGGTGCAGCAGCACGAGCTGTTCGACGACCAGAAGCACTTCGTCGAT GCGCTGCCGCTGCGTGACCCGGCGCTGATCAACGCCGACTATCTGGCGCAGCGCCAGCAACCCGGCTTCGACCTGCGCCG CTTCGTCGCCGCCAACTTCGAGGAATCCGACCCGGTGCAGACCGGGGCGATCCGCCAGGACACCGGCTTGCGCGAACACA TCGACGCGCTGTGGCCGCGGCTGGTGCGCCGCCAAGTGGAAGTGCCGCCCTACAGCAGCCTGCTGCCGCTGCCGCACCCC TACGTGGTGCCGGGCGGGCGCTTCCGCGAGGTCTACTACTGGGATTCCTACTTCACCATGCTCGGCCTGGTGGAGAGCGG CGAGCAAGAACACAGCCGGCAGATGCTGGACAACTTCGCCTACATGATCGACACCTACGGGCACATCCCCAACGGCAACC GCACCTACTACCTGAGCCGTTCGCAGCCGCCGTTCTTCTCGTACATGGTGCAGTTGCAGGCCAAGGTGGAAGGCGATGCC GCCTACGCGCGCTACCTGCCTCAGTTGCAGAAGGAATACGCGTACTGGATGGAAGGCGCGGAGACCTTGGCCCCAGGCAG CGCGCATGCGCACGTGGTGCGGCTGGCCGACGGCAGTCTGCTCAACCGCTACTGGGACGCCCGCGACACACCGCGCCCGG AAGCCTGGCTGCACGACGTGCGCACCGCTGCCGAGGCCAAGGACCGCCCCGCCGCCGAGGTCTACCGGGACCTGCGCGCT GGCGCCGAGAGCGGCTGGGACTATTCCAGCCGCTGGCTCGGCGACCGCAAGACCCTGGCCAGCATCCGCACCACCGCCAT CGTCCCGGTCGACCTGAACAGCCTGCTCTACCATTTGGAGACTACCCTGGCGCTCGCCTGCGCCAAGAACCCGGACGTGG CCGGCTGCAACACCGACTACGCCGCCCTGGCCAGCGCGCGCAAGACCGCGATCGACAAGCACCTGTGGAGCGATGCCGGC TACTACGCCGACTACGACTGGCAGCAGCGCCGGCTGCGCGGGCAGGTCACCGCGGCGGCGCTGTTCCCGCTGTTCGTCGG CGCCGCCTCGCCGGCACGGGCCAAGCGCAGCGCCGACACCGTGCAGGCGCAGCTGCTGCGCCCCGGCGGCCTGGCGACTA CGAGCCTGCACACCGGCCAGCAGTGGGACGAACCCAACGGCTGGGCGCCGCTGCAATGGATCGCCGTGGATGGCCTGCGC CGCTACGGCCAGGACGCGCTGGCGCAGTGCATCGGCACCCGCTTCCTGACGCGGGTGCAGGCGCTGTTCGCGCAGCAGCA CAAGCTGGTGGAGAAGTACGCGGTGGACGGGCAGGCCAAGGGCGGCGGCGGCGGCGAGTACGCCCTGCAGGACGGCTTCG GCTGGACCAACGGCGTGACCTTGCTGCTGATGGACCTCTACGCGGCGCCCGCCGCCGCGCGGGCAGCGTCGCACGCGCAA GCGCAGACGGAAGCGGTCGCGCCCTGA
Upstream 100 bases:
>100_bases GCGTTGCGTCGTTCACCGGTGCGAGCCGGGCGGCGCGCGCCCATCGTCGTTTCGAACGTTTATCGTGCCGCACGCATCCT GCTCTCTCTGGACCATAGAC
Downstream 100 bases:
>100_bases ACCGCCGCCGGCGGCACCGCGGCCACGCCGCGTCCGCCAGGACCAGCGGTCGGCGCTGCCGCTACTGCGCTGGCGTCTCC ACGGCAAGGCCCATCGCCGC
Product: trehalase
Products: NA
Alternate protein names: Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase [H]
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MIPAAPSCRTPLLSLVLGLLLGTAGTTAMAEAVPATTLTAPATTLTAPAPPPQTPDLAYPELFQAVQQHELFDDQKHFVD ALPLRDPALINADYLAQRQQPGFDLRRFVAANFEESDPVQTGAIRQDTGLREHIDALWPRLVRRQVEVPPYSSLLPLPHP YVVPGGRFREVYYWDSYFTMLGLVESGEQEHSRQMLDNFAYMIDTYGHIPNGNRTYYLSRSQPPFFSYMVQLQAKVEGDA AYARYLPQLQKEYAYWMEGAETLAPGSAHAHVVRLADGSLLNRYWDARDTPRPEAWLHDVRTAAEAKDRPAAEVYRDLRA GAESGWDYSSRWLGDRKTLASIRTTAIVPVDLNSLLYHLETTLALACAKNPDVAGCNTDYAALASARKTAIDKHLWSDAG YYADYDWQQRRLRGQVTAAALFPLFVGAASPARAKRSADTVQAQLLRPGGLATTSLHTGQQWDEPNGWAPLQWIAVDGLR RYGQDALAQCIGTRFLTRVQALFAQQHKLVEKYAVDGQAKGGGGGEYALQDGFGWTNGVTLLLMDLYAAPAAARAASHAQ AQTEAVAP
Sequences:
>Translated_568_residues MIPAAPSCRTPLLSLVLGLLLGTAGTTAMAEAVPATTLTAPATTLTAPAPPPQTPDLAYPELFQAVQQHELFDDQKHFVD ALPLRDPALINADYLAQRQQPGFDLRRFVAANFEESDPVQTGAIRQDTGLREHIDALWPRLVRRQVEVPPYSSLLPLPHP YVVPGGRFREVYYWDSYFTMLGLVESGEQEHSRQMLDNFAYMIDTYGHIPNGNRTYYLSRSQPPFFSYMVQLQAKVEGDA AYARYLPQLQKEYAYWMEGAETLAPGSAHAHVVRLADGSLLNRYWDARDTPRPEAWLHDVRTAAEAKDRPAAEVYRDLRA GAESGWDYSSRWLGDRKTLASIRTTAIVPVDLNSLLYHLETTLALACAKNPDVAGCNTDYAALASARKTAIDKHLWSDAG YYADYDWQQRRLRGQVTAAALFPLFVGAASPARAKRSADTVQAQLLRPGGLATTSLHTGQQWDEPNGWAPLQWIAVDGLR RYGQDALAQCIGTRFLTRVQALFAQQHKLVEKYAVDGQAKGGGGGEYALQDGFGWTNGVTLLLMDLYAAPAAARAASHAQ AQTEAVAP >Mature_568_residues MIPAAPSCRTPLLSLVLGLLLGTAGTTAMAEAVPATTLTAPATTLTAPAPPPQTPDLAYPELFQAVQQHELFDDQKHFVD ALPLRDPALINADYLAQRQQPGFDLRRFVAANFEESDPVQTGAIRQDTGLREHIDALWPRLVRRQVEVPPYSSLLPLPHP YVVPGGRFREVYYWDSYFTMLGLVESGEQEHSRQMLDNFAYMIDTYGHIPNGNRTYYLSRSQPPFFSYMVQLQAKVEGDA AYARYLPQLQKEYAYWMEGAETLAPGSAHAHVVRLADGSLLNRYWDARDTPRPEAWLHDVRTAAEAKDRPAAEVYRDLRA GAESGWDYSSRWLGDRKTLASIRTTAIVPVDLNSLLYHLETTLALACAKNPDVAGCNTDYAALASARKTAIDKHLWSDAG YYADYDWQQRRLRGQVTAAALFPLFVGAASPARAKRSADTVQAQLLRPGGLATTSLHTGQQWDEPNGWAPLQWIAVDGLR RYGQDALAQCIGTRFLTRVQALFAQQHKLVEKYAVDGQAKGGGGGEYALQDGFGWTNGVTLLLMDLYAAPAAARAASHAQ AQTEAVAP
Specific function: Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system [H]
COG id: COG1626
COG function: function code G; Neutral trehalase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 37 family [H]
Homologues:
Organism=Homo sapiens, GI116284412, Length=537, Percent_Identity=33.8919925512104, Blast_Score=250, Evalue=2e-66, Organism=Escherichia coli, GI1787447, Length=547, Percent_Identity=54.4789762340037, Blast_Score=580, Evalue=1e-167, Organism=Escherichia coli, GI1789936, Length=525, Percent_Identity=51.2380952380952, Blast_Score=511, Evalue=1e-146, Organism=Caenorhabditis elegans, GI17542196, Length=542, Percent_Identity=31.7343173431734, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI17565078, Length=566, Percent_Identity=31.2720848056537, Blast_Score=243, Evalue=3e-64, Organism=Caenorhabditis elegans, GI25148109, Length=438, Percent_Identity=34.703196347032, Blast_Score=238, Evalue=9e-63, Organism=Caenorhabditis elegans, GI25141398, Length=539, Percent_Identity=30.7977736549165, Blast_Score=221, Evalue=9e-58, Organism=Caenorhabditis elegans, GI71987755, Length=432, Percent_Identity=29.1666666666667, Blast_Score=178, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6319473, Length=431, Percent_Identity=31.7865429234339, Blast_Score=152, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6320204, Length=450, Percent_Identity=29.3333333333333, Blast_Score=152, Evalue=2e-37, Organism=Drosophila melanogaster, GI24656680, Length=584, Percent_Identity=32.8767123287671, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI24656675, Length=584, Percent_Identity=32.8767123287671, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI24656661, Length=518, Percent_Identity=34.9420849420849, Blast_Score=248, Evalue=9e-66, Organism=Drosophila melanogaster, GI17933716, Length=518, Percent_Identity=34.9420849420849, Blast_Score=248, Evalue=9e-66, Organism=Drosophila melanogaster, GI24656670, Length=518, Percent_Identity=34.9420849420849, Blast_Score=248, Evalue=9e-66, Organism=Drosophila melanogaster, GI24656685, Length=507, Percent_Identity=34.5167652859961, Blast_Score=245, Evalue=8e-65, Organism=Drosophila melanogaster, GI22024178, Length=539, Percent_Identity=28.5714285714286, Blast_Score=199, Evalue=5e-51, Organism=Drosophila melanogaster, GI45551104, Length=376, Percent_Identity=28.4574468085106, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI28573474, Length=302, Percent_Identity=30.4635761589404, Blast_Score=122, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR001661 - InterPro: IPR018232 [H]
Pfam domain/function: PF01204 Trehalase [H]
EC number: =3.2.1.28 [H]
Molecular weight: Translated: 62629; Mature: 62629
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00927 TREHALASE_1 ; PS00928 TREHALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPAAPSCRTPLLSLVLGLLLGTAGTTAMAEAVPATTLTAPATTLTAPAPPPQTPDLAYP CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCCCEEECCCCCCCCCCCCCH ELFQAVQQHELFDDQKHFVDALPLRDPALINADYLAQRQQPGFDLRRFVAANFEESDPVQ HHHHHHHHHHHHCHHHHHHHHCCCCCCCEECHHHHHHCCCCCHHHHHHHHCCCCCCCCCC TGAIRQDTGLREHIDALWPRLVRRQVEVPPYSSLLPLPHPYVVPGGRFREVYYWDSYFTM CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEEHHHHHH LGLVESGEQEHSRQMLDNFAYMIDTYGHIPNGNRTYYLSRSQPPFFSYMVQLQAKVEGDA HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCH AYARYLPQLQKEYAYWMEGAETLAPGSAHAHVVRLADGSLLNRYWDARDTPRPEAWLHDV HHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHH RTAAEAKDRPAAEVYRDLRAGAESGWDYSSRWLGDRKTLASIRTTAIVPVDLNSLLYHLE HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHEEEEECHHHHHHHHH TTLALACAKNPDVAGCNTDYAALASARKTAIDKHLWSDAGYYADYDWQQRRLRGQVTAAA HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LFPLFVGAASPARAKRSADTVQAQLLRPGGLATTSLHTGQQWDEPNGWAPLQWIAVDGLR HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHH RYGQDALAQCIGTRFLTRVQALFAQQHKLVEKYAVDGQAKGGGGGEYALQDGFGWTNGVT HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHH LLLMDLYAAPAAARAASHAQAQTEAVAP HHHHHHHHCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIPAAPSCRTPLLSLVLGLLLGTAGTTAMAEAVPATTLTAPATTLTAPAPPPQTPDLAYP CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCEECCCCCEEECCCCCCCCCCCCCH ELFQAVQQHELFDDQKHFVDALPLRDPALINADYLAQRQQPGFDLRRFVAANFEESDPVQ HHHHHHHHHHHHCHHHHHHHHCCCCCCCEECHHHHHHCCCCCHHHHHHHHCCCCCCCCCC TGAIRQDTGLREHIDALWPRLVRRQVEVPPYSSLLPLPHPYVVPGGRFREVYYWDSYFTM CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCEEEEEEEHHHHHH LGLVESGEQEHSRQMLDNFAYMIDTYGHIPNGNRTYYLSRSQPPFFSYMVQLQAKVEGDA HHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCH AYARYLPQLQKEYAYWMEGAETLAPGSAHAHVVRLADGSLLNRYWDARDTPRPEAWLHDV HHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCHHHHHHCCCCCCCCHHHHHHHH RTAAEAKDRPAAEVYRDLRAGAESGWDYSSRWLGDRKTLASIRTTAIVPVDLNSLLYHLE HHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHHEEEEECHHHHHHHHH TTLALACAKNPDVAGCNTDYAALASARKTAIDKHLWSDAGYYADYDWQQRRLRGQVTAAA HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH LFPLFVGAASPARAKRSADTVQAQLLRPGGLATTSLHTGQQWDEPNGWAPLQWIAVDGLR HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHH RYGQDALAQCIGTRFLTRVQALFAQQHKLVEKYAVDGQAKGGGGGEYALQDGFGWTNGVT HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHH LLLMDLYAAPAAARAASHAQAQTEAVAP HHHHHHHHCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]