| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is mhpC2 [H]
Identifier: 120608836
GI number: 120608836
Start: 138855
End: 139643
Strand: Direct
Name: mhpC2 [H]
Synonym: Aave_0128
Alternate gene names: 120608836
Gene position: 138855-139643 (Clockwise)
Preceding gene: 120608834
Following gene: 120608837
Centisome position: 2.59
GC content: 73.38
Gene sequence:
>789_bases ATGGCCCTGCTTCCCACTTTCACCACCCTTGGCGCCGGCCCCACCGTGCTCATGCTGCACGATGCCGACGGCGGCCACCT GACTTTCGCTCCCCAGGTCGAAACCCTCGCGGGCTCCGGCTACCGTGCCGTGGCCTGGGACATGCCGGGTTACGGCCGCA GCGCGCCCATCGAGCCCTACAGCTTCAAGGGGCTGGCGCAGAGCTGCATCGCCCTGCTCGATGCCCTGCAGTGCACGCAG GGCACGACCCTCGTCGGCCACGGCCTGGGCGCCATGGTGGCGGTCGAGGTCGCCTTGCGGGCGCCCCGCCGCGTGGGCCG GCTCGTGCTGTGCGCTGGCGGCCCGGCCCTGGACGGCGAAGGCCTGGACACCTGGGTGGCGCCCCGCGTCGCCGCGCTGG AGGACGACCAGGCCATGGAGCGCGTGGCCGAACTGCTGGTGCCGCGCCAGACCGGTACCGGGGCGTTGCCCGAAGGCGCG CGCCTGGCCGGCCATGCGATGGGCCAGGTCCACCGTTCCGCCTTCCGCCGCGCGCTGGAATTGCTGCCGGCGTTCGCGCG CGATGCCGCGGACCTCGCACACCTCTCCATGCCCACCCTGCTCGTGAGCGGCGCCCAGGACCGCTGCATGCCGCCCGAGG CCCTGCAGGCCCTGGCCCACGTGCTGCCCGACGCGCGGCACCTGAGCCTGCCGAACGTGGGGCACTGGCCGCAACTGGAG GATCCGGACGGTTTCGATGGCGCGCTGCTGGACTTCCTCGGCTCCTCCGCTCCGCGGACCATCCACTGA
Upstream 100 bases:
>100_bases GGCGGAAGGAATGGGTCGGCTATTATGGTCCGGTGCCCGCGCCCCCGCCGCCGACCGGGGCCGAATCCCCACCGGGCGCG TTGTCGTCGTCCCACCTTCC
Downstream 100 bases:
>100_bases TGGCGGCGCGCACGAACGGCACTTCCGGGGTGCCGGCCATCCCGCGCCGTCCGGGGTTCCTTTCCCCATGGCTGATGCCC CCGGCGGCCGCGCTGGCGCT
Product: alpha/beta hydrolase fold protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 2; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase 2; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 2 [H]
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MALLPTFTTLGAGPTVLMLHDADGGHLTFAPQVETLAGSGYRAVAWDMPGYGRSAPIEPYSFKGLAQSCIALLDALQCTQ GTTLVGHGLGAMVAVEVALRAPRRVGRLVLCAGGPALDGEGLDTWVAPRVAALEDDQAMERVAELLVPRQTGTGALPEGA RLAGHAMGQVHRSAFRRALELLPAFARDAADLAHLSMPTLLVSGAQDRCMPPEALQALAHVLPDARHLSLPNVGHWPQLE DPDGFDGALLDFLGSSAPRTIH
Sequences:
>Translated_262_residues MALLPTFTTLGAGPTVLMLHDADGGHLTFAPQVETLAGSGYRAVAWDMPGYGRSAPIEPYSFKGLAQSCIALLDALQCTQ GTTLVGHGLGAMVAVEVALRAPRRVGRLVLCAGGPALDGEGLDTWVAPRVAALEDDQAMERVAELLVPRQTGTGALPEGA RLAGHAMGQVHRSAFRRALELLPAFARDAADLAHLSMPTLLVSGAQDRCMPPEALQALAHVLPDARHLSLPNVGHWPQLE DPDGFDGALLDFLGSSAPRTIH >Mature_261_residues ALLPTFTTLGAGPTVLMLHDADGGHLTFAPQVETLAGSGYRAVAWDMPGYGRSAPIEPYSFKGLAQSCIALLDALQCTQG TTLVGHGLGAMVAVEVALRAPRRVGRLVLCAGGPALDGEGLDTWVAPRVAALEDDQAMERVAELLVPRQTGTGALPEGAR LAGHAMGQVHRSAFRRALELLPAFARDAADLAHLSMPTLLVSGAQDRCMPPEALQALAHVLPDARHLSLPNVGHWPQLED PDGFDGALLDFLGSSAPRTIH
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. MhpC family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=265, Percent_Identity=27.9245283018868, Blast_Score=79, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 27478; Mature: 27347
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLPTFTTLGAGPTVLMLHDADGGHLTFAPQVETLAGSGYRAVAWDMPGYGRSAPIEPY CCCCCCHHHCCCCCEEEEEECCCCCEEEECCCHHHHCCCCCEEEEECCCCCCCCCCCCCC SFKGLAQSCIALLDALQCTQGTTLVGHGLGAMVAVEVALRAPRRVGRLVLCAGGPALDGE CHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCHHHHCEEEEECCCCCCCCC GLDTWVAPRVAALEDDQAMERVAELLVPRQTGTGALPEGARLAGHAMGQVHRSAFRRALE CCCHHHCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LLPAFARDAADLAHLSMPTLLVSGAQDRCMPPEALQALAHVLPDARHLSLPNVGHWPQLE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC DPDGFDGALLDFLGSSAPRTIH CCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure ALLPTFTTLGAGPTVLMLHDADGGHLTFAPQVETLAGSGYRAVAWDMPGYGRSAPIEPY CCCCCHHHCCCCCEEEEEECCCCCEEEECCCHHHHCCCCCEEEEECCCCCCCCCCCCCC SFKGLAQSCIALLDALQCTQGTTLVGHGLGAMVAVEVALRAPRRVGRLVLCAGGPALDGE CHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHCHHHHCEEEEECCCCCCCCC GLDTWVAPRVAALEDDQAMERVAELLVPRQTGTGALPEGARLAGHAMGQVHRSAFRRALE CCCHHHCCHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LLPAFARDAADLAHLSMPTLLVSGAQDRCMPPEALQALAHVLPDARHLSLPNVGHWPQLE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC DPDGFDGALLDFLGSSAPRTIH CCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA