| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is mpaA [H]
Identifier: 120608837
GI number: 120608837
Start: 139643
End: 140917
Strand: Direct
Name: mpaA [H]
Synonym: Aave_0129
Alternate gene names: 120608837
Gene position: 139643-140917 (Clockwise)
Preceding gene: 120608836
Following gene: 120608840
Centisome position: 2.61
GC content: 74.27
Gene sequence:
>1275_bases ATGGCGGCGCGCACGAACGGCACTTCCGGGGTGCCGGCCATCCCGCGCCGTCCGGGGTTCCTTTCCCCATGGCTGATGCC CCCGGCGGCCGCGCTGGCGCTGGCGCTGCTCGGCGTTTCCGTGTGGGATCCCCGCGCCTTCCTGGCCGGCGGACAGGCAG GCGCAGGCACGGCCTCCGATGCGGTGGTCGCCATCGGCCGGGGGCACCTGGGCACGGGGGAGGGCGGAGCGGGATACCAC TCGGTGGTCGTGCTCGGCGCGCCCGCCGAACGTTCCGGGGACGCCGCGGCCTTCCCGGCGGCACCCCGGGCGTCCAGCGG AGCCCAGCCCCGGACAGGCCCCGCATCCGCTCCGGGCCGCAGCGACGGCGCCGCGGCGTCCGCGTCGGGCGCCATGACCA CCCGTGCCCTGGCGCCCGCCCAGGTGCCCGTCCCCTTGCCTCCACCCGGCGCGGCGCAATCGGTGGCCGCCTGCAAGCTG CTGCTGCCGCGCCTGCCCACGGTGGACCGGCCGCTCTGCGAGTCCACGCGCCTGTCCGAAAGCGGGGCGCACTCCCGCAA GGGGCTGCCGATCTACTGGAGGGATGTCACTCCGGCACCGGCGGCAGGCGGTGCCGCGGGGCCGGAGCCCCTGCGCGTGC TGGTGCTCGGTGCCATTCATGGTGACGAGCCCACCTCCGCGTCGCTGGCCATGCGCTGGATCGGTTTCGCGGCCCAGCCG CAGCCGGCGTTGCGGCAGCCCGTGCACTGGCGCTTCATTCCGGCGCTCAACCCCGACGGCATGCTGGCCCGTCCGGCGAC GCGCGTGAATGCACGGGGCGTGGACCTGAACCGCAACTTCCCCACGCCGAACTGGGAACGCGATGCCCCGGTGTACTGGG AAAAGCGCACCCGCCGCGATCCGCGCCGCTGGCCGGGGCCCAAGCCTTTGTCCGAGCCCGAGTCGCGCTTCCTGCACGAG CAGATGGAAGGCTTCCGGCCCGACCTGGTGGTGAGCATCCACGCTCCCTACGGAGTGCTCGACTACGACGGCCCGCTGCC GCCGCCCAGCCGCCTGGGCCGCCTGCGGCTCGACCAGCTCGGCATCTTCCCGGGCTCGCTCGGCCACTACGGCAGCGTGC GCCAGGGCATGCCCGTCGTCACCATCGAGCTGCAGCACGAACTGCGCATGCCCGAAGACAGCCAGGTGCGCCAGATGTGG GTGGACCTGCTGCGGTGGATGGATACCCACCTGGCCGCCACCGATACACCGGCCGCCGGCACCCCTGCGCGGTAG
Upstream 100 bases:
>100_bases TGCCGAACGTGGGGCACTGGCCGCAACTGGAGGATCCGGACGGTTTCGATGGCGCGCTGCTGGACTTCCTCGGCTCCTCC GCTCCGCGGACCATCCACTG
Downstream 100 bases:
>100_bases ATTCTCAGGAAAGGGGCGCCGCCAGGAAGCTCGCGGCCTCTCGCACGGCCGCCGCTTCCGCCTGCACCGCGCCCGGCGGC CCGCCCTTGCCCCAGAGCGC
Product: peptidase M14, carboxypeptidase A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MAARTNGTSGVPAIPRRPGFLSPWLMPPAAALALALLGVSVWDPRAFLAGGQAGAGTASDAVVAIGRGHLGTGEGGAGYH SVVVLGAPAERSGDAAAFPAAPRASSGAQPRTGPASAPGRSDGAAASASGAMTTRALAPAQVPVPLPPPGAAQSVAACKL LLPRLPTVDRPLCESTRLSESGAHSRKGLPIYWRDVTPAPAAGGAAGPEPLRVLVLGAIHGDEPTSASLAMRWIGFAAQP QPALRQPVHWRFIPALNPDGMLARPATRVNARGVDLNRNFPTPNWERDAPVYWEKRTRRDPRRWPGPKPLSEPESRFLHE QMEGFRPDLVVSIHAPYGVLDYDGPLPPPSRLGRLRLDQLGIFPGSLGHYGSVRQGMPVVTIELQHELRMPEDSQVRQMW VDLLRWMDTHLAATDTPAAGTPAR
Sequences:
>Translated_424_residues MAARTNGTSGVPAIPRRPGFLSPWLMPPAAALALALLGVSVWDPRAFLAGGQAGAGTASDAVVAIGRGHLGTGEGGAGYH SVVVLGAPAERSGDAAAFPAAPRASSGAQPRTGPASAPGRSDGAAASASGAMTTRALAPAQVPVPLPPPGAAQSVAACKL LLPRLPTVDRPLCESTRLSESGAHSRKGLPIYWRDVTPAPAAGGAAGPEPLRVLVLGAIHGDEPTSASLAMRWIGFAAQP QPALRQPVHWRFIPALNPDGMLARPATRVNARGVDLNRNFPTPNWERDAPVYWEKRTRRDPRRWPGPKPLSEPESRFLHE QMEGFRPDLVVSIHAPYGVLDYDGPLPPPSRLGRLRLDQLGIFPGSLGHYGSVRQGMPVVTIELQHELRMPEDSQVRQMW VDLLRWMDTHLAATDTPAAGTPAR >Mature_423_residues AARTNGTSGVPAIPRRPGFLSPWLMPPAAALALALLGVSVWDPRAFLAGGQAGAGTASDAVVAIGRGHLGTGEGGAGYHS VVVLGAPAERSGDAAAFPAAPRASSGAQPRTGPASAPGRSDGAAASASGAMTTRALAPAQVPVPLPPPGAAQSVAACKLL LPRLPTVDRPLCESTRLSESGAHSRKGLPIYWRDVTPAPAAGGAAGPEPLRVLVLGAIHGDEPTSASLAMRWIGFAAQPQ PALRQPVHWRFIPALNPDGMLARPATRVNARGVDLNRNFPTPNWERDAPVYWEKRTRRDPRRWPGPKPLSEPESRFLHEQ MEGFRPDLVVSIHAPYGVLDYDGPLPPPSRLGRLRLDQLGIFPGSLGHYGSVRQGMPVVTIELQHELRMPEDSQVRQMWV DLLRWMDTHLAATDTPAAGTPAR
Specific function: Unknown
COG id: COG2866
COG function: function code E; Predicted carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510938, Length=183, Percent_Identity=36.0655737704918, Blast_Score=80, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000834 [H]
Pfam domain/function: PF00246 Peptidase_M14 [H]
EC number: NA
Molecular weight: Translated: 44735; Mature: 44604
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARTNGTSGVPAIPRRPGFLSPWLMPPAAALALALLGVSVWDPRAFLAGGQAGAGTASD CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCC AVVAIGRGHLGTGEGGAGYHSVVVLGAPAERSGDAAAFPAAPRASSGAQPRTGPASAPGR EEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SDGAAASASGAMTTRALAPAQVPVPLPPPGAAQSVAACKLLLPRLPTVDRPLCESTRLSE CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCC SGAHSRKGLPIYWRDVTPAPAAGGAAGPEPLRVLVLGAIHGDEPTSASLAMRWIGFAAQP CCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCC QPALRQPVHWRFIPALNPDGMLARPATRVNARGVDLNRNFPTPNWERDAPVYWEKRTRRD CHHHHCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC PRRWPGPKPLSEPESRFLHEQMEGFRPDLVVSIHAPYGVLDYDGPLPPPSRLGRLRLDQL CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCHHHHCCEEHHHH GIFPGSLGHYGSVRQGMPVVTIELQHELRMPEDSQVRQMWVDLLRWMDTHLAATDTPAAG CCCCCCCCCCCCHHCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC TPAR CCCC >Mature Secondary Structure AARTNGTSGVPAIPRRPGFLSPWLMPPAAALALALLGVSVWDPRAFLAGGQAGAGTASD CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCC AVVAIGRGHLGTGEGGAGYHSVVVLGAPAERSGDAAAFPAAPRASSGAQPRTGPASAPGR EEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SDGAAASASGAMTTRALAPAQVPVPLPPPGAAQSVAACKLLLPRLPTVDRPLCESTRLSE CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCC SGAHSRKGLPIYWRDVTPAPAAGGAAGPEPLRVLVLGAIHGDEPTSASLAMRWIGFAAQP CCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHCCCCCC QPALRQPVHWRFIPALNPDGMLARPATRVNARGVDLNRNFPTPNWERDAPVYWEKRTRRD CHHHHCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC PRRWPGPKPLSEPESRFLHEQMEGFRPDLVVSIHAPYGVLDYDGPLPPPSRLGRLRLDQL CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCCCCCHHHHCCEEHHHH GIFPGSLGHYGSVRQGMPVVTIELQHELRMPEDSQVRQMWVDLLRWMDTHLAATDTPAAG CCCCCCCCCCCCHHCCCCEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC TPAR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]