| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608812
Identifier: 120608812
GI number: 120608812
Start: 108395
End: 109768
Strand: Direct
Name: 120608812
Synonym: Aave_0103
Alternate gene names: NA
Gene position: 108395-109768 (Clockwise)
Preceding gene: 120608810
Following gene: 120608818
Centisome position: 2.03
GC content: 75.33
Gene sequence:
>1374_bases GTGCCGGCTTCCCGGGCCGCACCGGGCGGCGGTCCGCGCCGCGGCGCCCGCACGGTCCTGGGTCGGGCCCTGCGGTGGAC GCTGGGCGGCGTGGCCGCCGCGGCCGCCCTCGTGGCGGTGGCGGGGGCCGCGGTGTGGTGGTGGCTGCCTTCCGACGAGG AACTCGCGCGGCGCGCAGGGGATGGCGCCGGTGACTTGCTCGGCGTGCCCGTCGTGGTGGACCGGCTCGAATGGCATCTG CTGCCCGCGCCCCGGGTGGTGCTGCACGGCGTGCACACCGAGCAGGAGGCCCCCGTTTCGGCGGACCGTATCGTGGCCGA CGCGCGCTGGTCCGACTTGCTGCGCCTGCGGCTCGCCCTGGCGCGGCTGCGGCTGGAGGGCGCGGCCATCCCGCAGCTGT CGCTATCGCAGTTCAAGGTGCGCGATGCCGAAGAGGACGGCCCGGCCGGCTTCGGGCCCTTCACGCTCGCCGAGGTACCG GTGGAGCACGCCGAATGGCAGGGCGTGCGCTGGATCGGGCGGCAGGGGCGTGACCTGGCCTATGGCGGCTCCGTGGATTT CGGGCCCGCATGGCGGCCCGTGCGCGGGCTGCTGGAGCGCGAGGGCGCCTCGCCGCCCACGCGCCTGGCCATCGAACGAG AAGGCGAAGACCGCTGGCGCGCCGACGTGACGGCCGGCGGGCGCACCGAGCGCGGCGAGCTGCGGCTGCAGGAATCCGGC GAGCGCTACCGGGTGACCGGCTCGCTCGACTTTTCCGGGGTGGACGTGGTGGGGCTCATGGACGCCTTCGAGCGCCGCTC CATCGTGTCGGGCCGGGCGAGCGGGCACACCGACCTCATCGCCGAAGGCGACGACCCGGCCGCGGCGATGCGGGCGCTCC AGACGCGCACGTCCTTCACGGTGGCCCGGGCGAAGCTGCTGACCTTCGACCTGGAGGCCGCCATCCGCAGCGCCGGCAGC GACAAGGGCGGCACGACCCAGCTCGACAGCCTGACGGGCATCGTGCGCACCGAGGCCGATCCCGGCGGCACCATCGTGCG CTACAGCGACCTGAAGGCGACCTCCGGCGTGCTCACCGCCACTGGCGACGCCGTGGTCCAGAACCAGCGCGTGAGCGGCC ACGTGGCGGTGGACCTGGTGGACGGCATCGTGGGCGTGCCGCTCGAATTCGGCGGCACGGTGAAGGACCCCACGCTCAGC CTGCCACCCGCCGCGCTGGCAGGCGCCGCCGTGGGCACGGTGGTCGCACCGGGCGTGGGCACGGCCCTGGGCGCTCGCAT CGGCGAAACCGTGCGGCGCATCTTCGGCGGAGAAGACAGGCAGGAGCCGCCGGCACCACGCCGCCTGCCGCCGGTGCGGC GGGATCCCGACTAG
Upstream 100 bases:
>100_bases TGCAGCGGAATGGCTGCGGTAAGGTGGTCCGTCCTCTGGATCGCGCAGCGTGCCCACGTCCCCCTCCTCCATTCCGTCCG CCGAGCCGGCCGACGCGTCC
Downstream 100 bases:
>100_bases AAAAAGAAAGGCGCCCGAAGGCGCCTCGTCATCGCTGGCTGGCTCCGGAGGAGCTCAGAACGTGGTCCAGTCGTCGTCGG CGTTGCTGTGCGCGGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 456
Protein sequence:
>457_residues MPASRAAPGGGPRRGARTVLGRALRWTLGGVAAAAALVAVAGAAVWWWLPSDEELARRAGDGAGDLLGVPVVVDRLEWHL LPAPRVVLHGVHTEQEAPVSADRIVADARWSDLLRLRLALARLRLEGAAIPQLSLSQFKVRDAEEDGPAGFGPFTLAEVP VEHAEWQGVRWIGRQGRDLAYGGSVDFGPAWRPVRGLLEREGASPPTRLAIEREGEDRWRADVTAGGRTERGELRLQESG ERYRVTGSLDFSGVDVVGLMDAFERRSIVSGRASGHTDLIAEGDDPAAAMRALQTRTSFTVARAKLLTFDLEAAIRSAGS DKGGTTQLDSLTGIVRTEADPGGTIVRYSDLKATSGVLTATGDAVVQNQRVSGHVAVDLVDGIVGVPLEFGGTVKDPTLS LPPAALAGAAVGTVVAPGVGTALGARIGETVRRIFGGEDRQEPPAPRRLPPVRRDPD
Sequences:
>Translated_457_residues MPASRAAPGGGPRRGARTVLGRALRWTLGGVAAAAALVAVAGAAVWWWLPSDEELARRAGDGAGDLLGVPVVVDRLEWHL LPAPRVVLHGVHTEQEAPVSADRIVADARWSDLLRLRLALARLRLEGAAIPQLSLSQFKVRDAEEDGPAGFGPFTLAEVP VEHAEWQGVRWIGRQGRDLAYGGSVDFGPAWRPVRGLLEREGASPPTRLAIEREGEDRWRADVTAGGRTERGELRLQESG ERYRVTGSLDFSGVDVVGLMDAFERRSIVSGRASGHTDLIAEGDDPAAAMRALQTRTSFTVARAKLLTFDLEAAIRSAGS DKGGTTQLDSLTGIVRTEADPGGTIVRYSDLKATSGVLTATGDAVVQNQRVSGHVAVDLVDGIVGVPLEFGGTVKDPTLS LPPAALAGAAVGTVVAPGVGTALGARIGETVRRIFGGEDRQEPPAPRRLPPVRRDPD >Mature_456_residues PASRAAPGGGPRRGARTVLGRALRWTLGGVAAAAALVAVAGAAVWWWLPSDEELARRAGDGAGDLLGVPVVVDRLEWHLL PAPRVVLHGVHTEQEAPVSADRIVADARWSDLLRLRLALARLRLEGAAIPQLSLSQFKVRDAEEDGPAGFGPFTLAEVPV EHAEWQGVRWIGRQGRDLAYGGSVDFGPAWRPVRGLLEREGASPPTRLAIEREGEDRWRADVTAGGRTERGELRLQESGE RYRVTGSLDFSGVDVVGLMDAFERRSIVSGRASGHTDLIAEGDDPAAAMRALQTRTSFTVARAKLLTFDLEAAIRSAGSD KGGTTQLDSLTGIVRTEADPGGTIVRYSDLKATSGVLTATGDAVVQNQRVSGHVAVDLVDGIVGVPLEFGGTVKDPTLSL PPAALAGAAVGTVVAPGVGTALGARIGETVRRIFGGEDRQEPPAPRRLPPVRRDPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48259; Mature: 48128
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASRAAPGGGPRRGARTVLGRALRWTLGGVAAAAALVAVAGAAVWWWLPSDEELARRAG CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHCC DGAGDLLGVPVVVDRLEWHLLPAPRVVLHGVHTEQEAPVSADRIVADARWSDLLRLRLAL CCCCCCCCHHHHHHHHHHEECCCCHHEEECCCCCCCCCCCHHHEEEHHHHHHHHHHHHHH ARLRLEGAAIPQLSLSQFKVRDAEEDGPAGFGPFTLAEVPVEHAEWQGVRWIGRQGRDLA HHHHHCCCCCCCCCHHHHEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHCCCCCEEE YGGSVDFGPAWRPVRGLLEREGASPPTRLAIEREGEDRWRADVTAGGRTERGELRLQESG ECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHEEECCCCCCCCCCCEEEECCC ERYRVTGSLDFSGVDVVGLMDAFERRSIVSGRASGHTDLIAEGDDPAAAMRALQTRTSFT CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH VARAKLLTFDLEAAIRSAGSDKGGTTQLDSLTGIVRTEADPGGTIVRYSDLKATSGVLTA HHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHEEEEECCCCCCCEEEEECCCCCCCEEEE TGDAVVQNQRVSGHVAVDLVDGIVGVPLEFGGTVKDPTLSLPPAALAGAAVGTVVAPGVG CCCHHHCCCCCCCEEEEEECCCHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCH TALGARIGETVRRIFGGEDRQEPPAPRRLPPVRRDPD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PASRAAPGGGPRRGARTVLGRALRWTLGGVAAAAALVAVAGAAVWWWLPSDEELARRAG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHCC DGAGDLLGVPVVVDRLEWHLLPAPRVVLHGVHTEQEAPVSADRIVADARWSDLLRLRLAL CCCCCCCCHHHHHHHHHHEECCCCHHEEECCCCCCCCCCCHHHEEEHHHHHHHHHHHHHH ARLRLEGAAIPQLSLSQFKVRDAEEDGPAGFGPFTLAEVPVEHAEWQGVRWIGRQGRDLA HHHHHCCCCCCCCCHHHHEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHHCCCCCEEE YGGSVDFGPAWRPVRGLLEREGASPPTRLAIEREGEDRWRADVTAGGRTERGELRLQESG ECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCHHEEECCCCCCCCCCCEEEECCC ERYRVTGSLDFSGVDVVGLMDAFERRSIVSGRASGHTDLIAEGDDPAAAMRALQTRTSFT CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHH VARAKLLTFDLEAAIRSAGSDKGGTTQLDSLTGIVRTEADPGGTIVRYSDLKATSGVLTA HHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHEEEEECCCCCCCEEEEECCCCCCCEEEE TGDAVVQNQRVSGHVAVDLVDGIVGVPLEFGGTVKDPTLSLPPAALAGAAVGTVVAPGVG CCCHHHCCCCCCCEEEEEECCCHHCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCH TALGARIGETVRRIFGGEDRQEPPAPRRLPPVRRDPD HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA