Click here to switch to the map view.

The map label for this gene is 120608810

Identifier: 120608810

GI number: 120608810

Start: 106089

End: 106814

Strand: Direct

Name: 120608810

Synonym: Aave_0101

Alternate gene names: NA

Gene position: 106089-106814 (Clockwise)

Preceding gene: 120608807

Following gene: 120608812

Centisome position: 1.98

GC content: 73.0

Gene sequence:

>726_bases
ATGCCCGCGCCCAGCCTCTGCCCCTCCTGCCGCCAACCCGCCGAGAACCACCGCTTCGCCGCGCGCGACGGCGGGGAACT
GCACATCGATCTGTGCTTCGCCTGCCAGGGCCTGTGGTTCGATCCGCAGGAAAACACTCGGCTCGCGCCCGCAGCGGTGC
TGGAGCTGTTCGAGCTGCTGCACCGGCACCGCGGCGATGCGCACCGCCCGCTCGGCGAACGCACGCAATGCCCGCGCTGC
GCGAAGGCGCTGGAGCCGGGGTTCGACCTGGGCCAGGGCGGCCGCTACCGCACCTACCGCTGCGCGGCGCGCCACGGCCG
GTTCAGCACGTTCGGCGCGTTCATGGTGGAGAAAGGCTTCGTGCGCCATCTCTCGTCGCTGGAGATCGAGGCGCTGGCCG
AGCGCGTGGGCACCATTGCCTGCACGGCCTGCGGCGGCGCGGTGGACATCCGCAACGACCATGCCTGCCCGTACTGCCGC
TCGGCCCTGTCGCTGCTCGATCCGCAGGCGGTGGACAAGGCGCTGGAGCGCCATGCCCGCGCCGCGCAGGCAGCGGCCGG
GCCCGCGCGGCCCGAAGCCCTGGCCGACGCGCTCATCGCGATGGAACGCGAGCGTGAGCGCGAGCGGCGGGAACGCCAGC
GGGAGGCGTTCACCTCCACCACCTCCGAGCGGTTCGACCTGCTCGCGGCCGGGGTGGAGCTGGTCTGGTCGCTGCTGAAG
CGCTGA

Upstream 100 bases:

>100_bases
AGCCGTTGCCCGGGCAGCCCCCCCGCTGCACGGGGCACGGCAGAGTGACGCGGCCGACAGTGCGCGGACCTGCCGGGCCG
TGCCGTACCATGCGCTTCCG

Downstream 100 bases:

>100_bases
ACGACTGCAGGCCCGGATCAGCGGCCGCGCCGCAGGTTCAGCAGCGCGTAGAGCCCGATCGCGCCGAAGGTGGCGGTGCC
GATGCCGCCCAGCGCGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MPAPSLCPSCRQPAENHRFAARDGGELHIDLCFACQGLWFDPQENTRLAPAAVLELFELLHRHRGDAHRPLGERTQCPRC
AKALEPGFDLGQGGRYRTYRCAARHGRFSTFGAFMVEKGFVRHLSSLEIEALAERVGTIACTACGGAVDIRNDHACPYCR
SALSLLDPQAVDKALERHARAAQAAAGPARPEALADALIAMERERERERRERQREAFTSTTSERFDLLAAGVELVWSLLK
R

Sequences:

>Translated_241_residues
MPAPSLCPSCRQPAENHRFAARDGGELHIDLCFACQGLWFDPQENTRLAPAAVLELFELLHRHRGDAHRPLGERTQCPRC
AKALEPGFDLGQGGRYRTYRCAARHGRFSTFGAFMVEKGFVRHLSSLEIEALAERVGTIACTACGGAVDIRNDHACPYCR
SALSLLDPQAVDKALERHARAAQAAAGPARPEALADALIAMERERERERRERQREAFTSTTSERFDLLAAGVELVWSLLK
R
>Mature_240_residues
PAPSLCPSCRQPAENHRFAARDGGELHIDLCFACQGLWFDPQENTRLAPAAVLELFELLHRHRGDAHRPLGERTQCPRCA
KALEPGFDLGQGGRYRTYRCAARHGRFSTFGAFMVEKGFVRHLSSLEIEALAERVGTIACTACGGAVDIRNDHACPYCRS
ALSLLDPQAVDKALERHARAAQAAAGPARPEALADALIAMERERERERRERQREAFTSTTSERFDLLAAGVELVWSLLKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26749; Mature: 26617

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAPSLCPSCRQPAENHRFAARDGGELHIDLCFACQGLWFDPQENTRLAPAAVLELFELL
CCCCCCCCHHCCCHHHCCEECCCCCEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
HRHRGDAHRPLGERTQCPRCAKALEPGFDLGQGGRYRTYRCAARHGRFSTFGAFMVEKGF
HHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
VRHLSSLEIEALAERVGTIACTACGGAVDIRNDHACPYCRSALSLLDPQAVDKALERHAR
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
AAQAAAGPARPEALADALIAMERERERERRERQREAFTSTTSERFDLLAAGVELVWSLLK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
R
C
>Mature Secondary Structure 
PAPSLCPSCRQPAENHRFAARDGGELHIDLCFACQGLWFDPQENTRLAPAAVLELFELL
CCCCCCCHHCCCHHHCCEECCCCCEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
HRHRGDAHRPLGERTQCPRCAKALEPGFDLGQGGRYRTYRCAARHGRFSTFGAFMVEKGF
HHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
VRHLSSLEIEALAERVGTIACTACGGAVDIRNDHACPYCRSALSLLDPQAVDKALERHAR
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
AAQAAAGPARPEALADALIAMERERERERRERQREAFTSTTSERFDLLAAGVELVWSLLK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
R
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA