| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120608727
Identifier: 120608727
GI number: 120608727
Start: 15295
End: 15792
Strand: Direct
Name: 120608727
Synonym: Aave_0014
Alternate gene names: NA
Gene position: 15295-15792 (Clockwise)
Preceding gene: 120608726
Following gene: 120608728
Centisome position: 0.29
GC content: 63.25
Gene sequence:
>498_bases ATGACCCAGGATTCCCCCCAGACCACGCTCTGGAAACTGATCAAGGACATCCGCTTCGGCATGCTCACGCACCGCTCGGC CACCGGCCAGCTGCATGCGCATCCGCTGACCACGCAGAACAAGGACATCGACGAGCAATCGGAGCTGTACTTCTTCATCC CCCACGACGGCGAGCTCGCGCAGCGCCTGAAGGCCGATGCCCAGACGAACGTCACCTATGCCAACCCGGAGAAAGACAGC TACGTGTCCCTGTCCGGCTCGGCCGGCTTCATCGAGGACAAGGCCCGCAAGGAGGCGCTGTGGTCGCCCCAGGCCAAGGC CTGGTTCCCCCAGGGCATCGACGATCCCAACCTGGCGCTGCTGGTGATCCGCATCCAGCACGCCGAGTACTGGGACGTGA AGGAAAGCAAGATGACCCAGCTCTTCAAGATGGCCAAGGCGGCCGTCACCGGCAACCCGCCGAACATGGGAGAGCACAGG GAACTATCGCTGTCCTGA
Upstream 100 bases:
>100_bases CGGCGGGGCCGACCCCGGCAGGACTGCATGCGGCCTACAGTGGGTTTTCCACACCGGGTCGCCGCGCGCCCGGCCACGCA CATCTACCGGAGGCTCTCCC
Downstream 100 bases:
>100_bases TACGGCCGATCCGGCCCCAACCTTTGAAGGAGACAGGCATGTCCGACAAGCAGCAGCCCGGCACGGGCAAGGTCGAGAAC GACCACAACCAGCAAGGTAA
Product: putative general stress protein 26
Products: NA
Alternate protein names: Stress Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; General Stress
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MTQDSPQTTLWKLIKDIRFGMLTHRSATGQLHAHPLTTQNKDIDEQSELYFFIPHDGELAQRLKADAQTNVTYANPEKDS YVSLSGSAGFIEDKARKEALWSPQAKAWFPQGIDDPNLALLVIRIQHAEYWDVKESKMTQLFKMAKAAVTGNPPNMGEHR ELSLS
Sequences:
>Translated_165_residues MTQDSPQTTLWKLIKDIRFGMLTHRSATGQLHAHPLTTQNKDIDEQSELYFFIPHDGELAQRLKADAQTNVTYANPEKDS YVSLSGSAGFIEDKARKEALWSPQAKAWFPQGIDDPNLALLVIRIQHAEYWDVKESKMTQLFKMAKAAVTGNPPNMGEHR ELSLS >Mature_164_residues TQDSPQTTLWKLIKDIRFGMLTHRSATGQLHAHPLTTQNKDIDEQSELYFFIPHDGELAQRLKADAQTNVTYANPEKDSY VSLSGSAGFIEDKARKEALWSPQAKAWFPQGIDDPNLALLVIRIQHAEYWDVKESKMTQLFKMAKAAVTGNPPNMGEHRE LSLS
Specific function: Unknown
COG id: COG3871
COG function: function code R; Uncharacterized stress protein (general stress protein 26)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18653; Mature: 18522
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDSPQTTLWKLIKDIRFGMLTHRSATGQLHAHPLTTQNKDIDEQSELYFFIPHDGELA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCHHHH QRLKADAQTNVTYANPEKDSYVSLSGSAGFIEDKARKEALWSPQAKAWFPQGIDDPNLAL HHHHCCCCCCCEECCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEE LVIRIQHAEYWDVKESKMTQLFKMAKAAVTGNPPNMGEHRELSLS EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCC >Mature Secondary Structure TQDSPQTTLWKLIKDIRFGMLTHRSATGQLHAHPLTTQNKDIDEQSELYFFIPHDGELA CCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCHHHH QRLKADAQTNVTYANPEKDSYVSLSGSAGFIEDKARKEALWSPQAKAWFPQGIDDPNLAL HHHHCCCCCCCEECCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEE LVIRIQHAEYWDVKESKMTQLFKMAKAAVTGNPPNMGEHRELSLS EEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA