Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119947160
Identifier: 119947160
GI number: 119947160
Start: 4376888
End: 4377592
Strand: Reverse
Name: 119947160
Synonym: Ping_3558
Alternate gene names: NA
Gene position: 4377592-4376888 (Counterclockwise)
Preceding gene: 119947161
Following gene: 119947158
Centisome position: 96.01
GC content: 40.14
Gene sequence:
>705_bases GTGAGACGAATTTTAATTCTGCTTTTAGCCTTTTTAGCGAGTTATTCTTCGGCCCTTGAAGTTTCGCAGCTCACGACTAT TGTAAAAAAACAGATCAATACCGACAGCGCTACGTTTGCCCGGAAAATGGATTGGCAGGAATACCGTTACAGCAGTACGC TGCGTATTCCGCCATCATTAAAAAAACTTGAGGATTGTTTGTCGCCTGTCATTATTAGTCTGGCGGCAGCTAATGCTATT AACCGCGTCAGCTATAAAGTGACATGTGATAATACGGTTAAGCAACACAAATGGTCAGTCAATATTGTCGCCAATATTAA TTATTATATGGCGGTTGCTACCACTGCTTCATCATTACCCCGTGGGCATTCCCTGCAGCCTGAGGATATTGTCTTTCGTG AACAGAGAATAAGAAATAATGATTATTATCCGAATGTTGCCGGTCTTGCGGGGAAAAAAACAAAACGCAAATTACGTGCA GGCAGCATTATAAAAAAGAAAGATATAATCATAGAATATGCGGTAATACGAAAATCTGAAGTGAGCATTATATTCAAGCA GGATTCTTTTTCTTTGAGTACCCTTGGTATCGCGCTTAAATCAGGCCAGCTTGGTGATTTAATCAAGGTCAAAAATAAAC GTTCGGGTAATATTATTACCACCACGGTGATCGGCAAAAATAAAGTGTCCGTTGAGTCCAAATAG
Upstream 100 bases:
>100_bases AAGTGAATACCATTATGACAGAACAAAAATGGGCAGCGGCATTTAACCTTAACCAAAACCACGCCACTATATCGCGTAAA ACCGTTGTTGATCTACTCAA
Downstream 100 bases:
>100_bases AACCTGATTATCTTTGCCGATTAATTTTTGAGAAAGTTACAAATCAACAGCAATAATCATTTTAGAGCTGTTAGACACTC GGCTTCTATAAGATATCAGC
Product: flagellar basal body P-ring biosynthesis protein-like protein
Products: NA
Alternate protein names: Lateral Flagellar P-Ring Addition Protein; Flagellar Basal-Body P-Ring Formation Protein FlgA; SAF Domain-Containing Protein; Flagellar Basal Body P-Ring Biosynthesis Protein; Flagella Basal Body P-Ring Formation Protein FlgA; Flageller Protein FlgA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MRRILILLLAFLASYSSALEVSQLTTIVKKQINTDSATFARKMDWQEYRYSSTLRIPPSLKKLEDCLSPVIISLAAANAI NRVSYKVTCDNTVKQHKWSVNIVANINYYMAVATTASSLPRGHSLQPEDIVFREQRIRNNDYYPNVAGLAGKKTKRKLRA GSIIKKKDIIIEYAVIRKSEVSIIFKQDSFSLSTLGIALKSGQLGDLIKVKNKRSGNIITTTVIGKNKVSVESK
Sequences:
>Translated_234_residues MRRILILLLAFLASYSSALEVSQLTTIVKKQINTDSATFARKMDWQEYRYSSTLRIPPSLKKLEDCLSPVIISLAAANAI NRVSYKVTCDNTVKQHKWSVNIVANINYYMAVATTASSLPRGHSLQPEDIVFREQRIRNNDYYPNVAGLAGKKTKRKLRA GSIIKKKDIIIEYAVIRKSEVSIIFKQDSFSLSTLGIALKSGQLGDLIKVKNKRSGNIITTTVIGKNKVSVESK >Mature_234_residues MRRILILLLAFLASYSSALEVSQLTTIVKKQINTDSATFARKMDWQEYRYSSTLRIPPSLKKLEDCLSPVIISLAAANAI NRVSYKVTCDNTVKQHKWSVNIVANINYYMAVATTASSLPRGHSLQPEDIVFREQRIRNNDYYPNVAGLAGKKTKRKLRA GSIIKKKDIIIEYAVIRKSEVSIIFKQDSFSLSTLGIALKSGQLGDLIKVKNKRSGNIITTTVIGKNKVSVESK
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26168; Mature: 26168
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRILILLLAFLASYSSALEVSQLTTIVKKQINTDSATFARKMDWQEYRYSSTLRIPPSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCEEECCCCH KKLEDCLSPVIISLAAANAINRVSYKVTCDNTVKQHKWSVNIVANINYYMAVATTASSLP HHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHCEEEEEEEEECEEEEEEEECHHCCC RGHSLQPEDIVFREQRIRNNDYYPNVAGLAGKKTKRKLRAGSIIKKKDIIIEYAVIRKSE CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEHHHEEEEEEEEECCC VSIIFKQDSFSLSTLGIALKSGQLGDLIKVKNKRSGNIITTTVIGKNKVSVESK EEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCCCCEEEEEEECCCEEECCCC >Mature Secondary Structure MRRILILLLAFLASYSSALEVSQLTTIVKKQINTDSATFARKMDWQEYRYSSTLRIPPSL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCEEECCCCH KKLEDCLSPVIISLAAANAINRVSYKVTCDNTVKQHKWSVNIVANINYYMAVATTASSLP HHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCHHHCEEEEEEEEECEEEEEEEECHHCCC RGHSLQPEDIVFREQRIRNNDYYPNVAGLAGKKTKRKLRAGSIIKKKDIIIEYAVIRKSE CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCEEHHHEEEEEEEEECCC VSIIFKQDSFSLSTLGIALKSGQLGDLIKVKNKRSGNIITTTVIGKNKVSVESK EEEEEECCCCCEEEEEEEEECCCCCCEEEECCCCCCCEEEEEEECCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA