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The map label for this gene is blc [H]

Identifier: 119947158

GI number: 119947158

Start: 4374406

End: 4374963

Strand: Reverse

Name: blc [H]

Synonym: Ping_3556

Alternate gene names: 119947158

Gene position: 4374963-4374406 (Counterclockwise)

Preceding gene: 119947160

Following gene: 119947152

Centisome position: 95.95

GC content: 37.99

Gene sequence:

>558_bases
ATGCGTATAATTTTGATCGCTGTGATTGCTTTTTTACAGTTTGGCTGTACCGGGGTAGCAAAGGATATCAAACCCGTCGA
AGGGCTGCAGACTGAGAAATATTTAGGTCTATGGTATGAGATTGCCCGTTTGGATCACTCATTTGAAAGAGGGATGTCGA
ATGTTAAGGCCGAATATTCATTGCGAGAAGATGGCGGGATAAAGGTCTTAAATAGTGGTTACTCAAGCGAAGAAAAAGAA
TGGACAACGGCTGAAGGAAAAGCCTATTTTGTCGATGAGAAAAACAAAGGTCACCTAAAAGTATCATTTTTCGGTCCGTT
TTACGGCTCTTATGTGATTTTTAAACTAGATAAAATAAATTACCAGTATGCTTATGTGACAAGCTACAGCAAAGATTATT
TATGGTTATTAGCAAGAACAGCAACGGTAACAGAAGCTGTTAAACAAGATTTTATAAAGACCGCCAAAATAAACGGTTTT
GCAACGGATCAACTGATTTTTGTTGATCAACAAAGCGTGCTCAATGAAGCTGAGAAAGGTGGAATTACGAAAGAATAA

Upstream 100 bases:

>100_bases
ACAGTATAGGATACTCTGGTGCAACAATGTGATCGCATTTTTCTGCTGCAACGTACTACATTTAAGCTAAATTTAGAATT
CACTATTAGGGAAAATAAAG

Downstream 100 bases:

>100_bases
ATCATACCAAATCCACTCATTTTCTATTCATTTATGCTTGTTAAAATGAATGTTAGCTTCGTTGTTTATTTTGTAATTAG
AACAACTAGTTACTGCAATA

Product: Lipocalin family protein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRIILIAVIAFLQFGCTGVAKDIKPVEGLQTEKYLGLWYEIARLDHSFERGMSNVKAEYSLREDGGIKVLNSGYSSEEKE
WTTAEGKAYFVDEKNKGHLKVSFFGPFYGSYVIFKLDKINYQYAYVTSYSKDYLWLLARTATVTEAVKQDFIKTAKINGF
ATDQLIFVDQQSVLNEAEKGGITKE

Sequences:

>Translated_185_residues
MRIILIAVIAFLQFGCTGVAKDIKPVEGLQTEKYLGLWYEIARLDHSFERGMSNVKAEYSLREDGGIKVLNSGYSSEEKE
WTTAEGKAYFVDEKNKGHLKVSFFGPFYGSYVIFKLDKINYQYAYVTSYSKDYLWLLARTATVTEAVKQDFIKTAKINGF
ATDQLIFVDQQSVLNEAEKGGITKE
>Mature_185_residues
MRIILIAVIAFLQFGCTGVAKDIKPVEGLQTEKYLGLWYEIARLDHSFERGMSNVKAEYSLREDGGIKVLNSGYSSEEKE
WTTAEGKAYFVDEKNKGHLKVSFFGPFYGSYVIFKLDKINYQYAYVTSYSKDYLWLLARTATVTEAVKQDFIKTAKINGF
ATDQLIFVDQQSVLNEAEKGGITKE

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=173, Percent_Identity=43.3526011560694, Blast_Score=162, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 21008; Mature: 21008

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIILIAVIAFLQFGCTGVAKDIKPVEGLQTEKYLGLWYEIARLDHSFERGMSNVKAEYS
CEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEE
LREDGGIKVLNSGYSSEEKEWTTAEGKAYFVDEKNKGHLKVSFFGPFYGSYVIFKLDKIN
ECCCCCEEEEECCCCCCCCCEECCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEECCC
YQYAYVTSYSKDYLWLLARTATVTEAVKQDFIKTAKINGFATDQLIFVDQQSVLNEAEKG
EEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCC
GITKE
CCCCC
>Mature Secondary Structure
MRIILIAVIAFLQFGCTGVAKDIKPVEGLQTEKYLGLWYEIARLDHSFERGMSNVKAEYS
CEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEE
LREDGGIKVLNSGYSSEEKEWTTAEGKAYFVDEKNKGHLKVSFFGPFYGSYVIFKLDKIN
ECCCCCEEEEECCCCCCCCCEECCCCEEEEEECCCCCEEEEEEECCCCCCEEEEEEECCC
YQYAYVTSYSKDYLWLLARTATVTEAVKQDFIKTAKINGFATDQLIFVDQQSVLNEAEKG
EEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHCC
GITKE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]