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The map label for this gene is yiaN [C]

Identifier: 119947146

GI number: 119947146

Start: 4361525

End: 4362829

Strand: Reverse

Name: yiaN [C]

Synonym: Ping_3544

Alternate gene names: 119947146

Gene position: 4362829-4361525 (Counterclockwise)

Preceding gene: 119947147

Following gene: 119947145

Centisome position: 95.68

GC content: 47.74

Gene sequence:

>1305_bases
ATGAATGAACTGATTATTGGAGGCATACTTCTGGTTGTGCTGTTTGGTTTTCTTGCCAGCGGACTGTGGGTGGCTTTGTC
ACTGCTGATGGTGGCTATCTCAGGTATGATCCTGTTAGGTAACGACGCCTTTGGTTTGATTTATGCAACCTCCACCTGGG
GCGCGGTGTCTGACTGGTCACTCGCAGCTTTGCCGTTGTTTATCTGGATGGGGGAAATTCTATTCAGAACCCGTTTGTCC
AGTGACCTGTTCGAAGGGTTAACACCCTGGCTGGGGCGAGTACCCGGTCGCCTGTTACATGTAAATATTTTAAGTTGCGG
TCTATTTGCCGCAGTGTCCGGATCATCGGCTGCAACGGCGGCGACAATCGGTAAAATGACACTGCCTGAGCTCAAAAAGC
AGGGCTACGATGATAAAATGGCGATTGCAACACTGGCAGGTTCAGGAACACTTGGTCTTTTAATTCCACCGTCGATTATT
TTGATTGTTTATGGTGTGGCCGCAGAGGTTTCTATTGGCCGTTTATTTATTGCAGGTGCCGTGCCCGGTCTGATGCTGGT
AATGCTGTTTATGGGATATACCATGTACTGGGCATTGCGCAATCCGAGCAAAGTACCTAGCGACACAGTTACCTACAGCT
GGTCTGTAAAGTTGAAAGCCCTGCTCAAGCTTATTCCTGTTGGGCTTCTGGTCTTATTTGTTCTGGGTTCTATTTATGGT
GGTCTAACAACTCCGACTGAGGCTGCGGCTTTTGGGGTCGTTGGCGCACTATTGCTTGCTTTTACTGGTCGCTCCCTGAC
TCGGGAAAGTCTGGTTGGCAGCTTAATGGGGGCGACAAAAACCTCATGCATGATTCTTTTAATTCTTGCCGGTGCGGCAT
TTTTAACCGTTGCAATGGGTTTTATTGGGTTACCCCGTATGCTGGCAGAAACTATCGCTGCAATGGAGCTTTCACCTTAT
CTACTGCTGTTTATTTTGACCTTGTTGTTTGTGGTGCTGGGCTGTTTCTTAGACGGCATTTCTGTTGTTGTCCTGACCAC
CTCAGTGGTTTTACCTATGGTGCTGCAGGCCGGAATTGATCCGCTGTGGTTCGGTATTTATATTGTGCTGGTTGTTGAAA
TGTCACAAATCACTCCGCCCGTCGGTTTTAACTTATTTGTCCTTCAAAGCCTCACCGGGCGTGATATGATCTTTATCTCA
AAGGCTGCGCTACCGTTTTTCTTCTTATTACTTTTCGCGGTAGTAATAGTCACAGTATTTCCGGGTATTGTCACCTGGCT
ACCATCGGAAATGACCGCCAGTTAA

Upstream 100 bases:

>100_bases
TTGGTAAACGAATTCCACTTTCTGAAGAGGAATCGCTGGCTGAAAAAGATTTTATTAATATTGACGGTGTAAAACATCAG
GATTCAAAGGGAGAGAGTCA

Downstream 100 bases:

>100_bases
AAAGAGGTAACTATGAAAAAGAGTGAATATTTTCCAATCGTATCTTCATCGCATTTGATGGGGAAAGATTCCGTTACGTT
AAGTGAGTTTGAATATGCGT

Product: TRAP dicarboxylate transporter, DctM subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MNELIIGGILLVVLFGFLASGLWVALSLLMVAISGMILLGNDAFGLIYATSTWGAVSDWSLAALPLFIWMGEILFRTRLS
SDLFEGLTPWLGRVPGRLLHVNILSCGLFAAVSGSSAATAATIGKMTLPELKKQGYDDKMAIATLAGSGTLGLLIPPSII
LIVYGVAAEVSIGRLFIAGAVPGLMLVMLFMGYTMYWALRNPSKVPSDTVTYSWSVKLKALLKLIPVGLLVLFVLGSIYG
GLTTPTEAAAFGVVGALLLAFTGRSLTRESLVGSLMGATKTSCMILLILAGAAFLTVAMGFIGLPRMLAETIAAMELSPY
LLLFILTLLFVVLGCFLDGISVVVLTTSVVLPMVLQAGIDPLWFGIYIVLVVEMSQITPPVGFNLFVLQSLTGRDMIFIS
KAALPFFFLLLFAVVIVTVFPGIVTWLPSEMTAS

Sequences:

>Translated_434_residues
MNELIIGGILLVVLFGFLASGLWVALSLLMVAISGMILLGNDAFGLIYATSTWGAVSDWSLAALPLFIWMGEILFRTRLS
SDLFEGLTPWLGRVPGRLLHVNILSCGLFAAVSGSSAATAATIGKMTLPELKKQGYDDKMAIATLAGSGTLGLLIPPSII
LIVYGVAAEVSIGRLFIAGAVPGLMLVMLFMGYTMYWALRNPSKVPSDTVTYSWSVKLKALLKLIPVGLLVLFVLGSIYG
GLTTPTEAAAFGVVGALLLAFTGRSLTRESLVGSLMGATKTSCMILLILAGAAFLTVAMGFIGLPRMLAETIAAMELSPY
LLLFILTLLFVVLGCFLDGISVVVLTTSVVLPMVLQAGIDPLWFGIYIVLVVEMSQITPPVGFNLFVLQSLTGRDMIFIS
KAALPFFFLLLFAVVIVTVFPGIVTWLPSEMTAS
>Mature_434_residues
MNELIIGGILLVVLFGFLASGLWVALSLLMVAISGMILLGNDAFGLIYATSTWGAVSDWSLAALPLFIWMGEILFRTRLS
SDLFEGLTPWLGRVPGRLLHVNILSCGLFAAVSGSSAATAATIGKMTLPELKKQGYDDKMAIATLAGSGTLGLLIPPSII
LIVYGVAAEVSIGRLFIAGAVPGLMLVMLFMGYTMYWALRNPSKVPSDTVTYSWSVKLKALLKLIPVGLLVLFVLGSIYG
GLTTPTEAAAFGVVGALLLAFTGRSLTRESLVGSLMGATKTSCMILLILAGAAFLTVAMGFIGLPRMLAETIAAMELSPY
LLLFILTLLFVVLGCFLDGISVVVLTTSVVLPMVLQAGIDPLWFGIYIVLVVEMSQITPPVGFNLFVLQSLTGRDMIFIS
KAALPFFFLLLFAVVIVTVFPGIVTWLPSEMTAS

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=385, Percent_Identity=30.6493506493506, Blast_Score=128, Evalue=9e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46078; Mature: 46078

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELIIGGILLVVLFGFLASGLWVALSLLMVAISGMILLGNDAFGLIYATSTWGAVSDWS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCCH
LAALPLFIWMGEILFRTRLSSDLFEGLTPWLGRVPGRLLHVNILSCGLFAAVSGSSAATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHH
ATIGKMTLPELKKQGYDDKMAIATLAGSGTLGLLIPPSIILIVYGVAAEVSIGRLFIAGA
HHHCCCCHHHHHHCCCCCHHEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
VPGLMLVMLFMGYTMYWALRNPSKVPSDTVTYSWSVKLKALLKLIPVGLLVLFVLGSIYG
HHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
GLTTPTEAAAFGVVGALLLAFTGRSLTRESLVGSLMGATKTSCMILLILAGAAFLTVAMG
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
FIGLPRMLAETIAAMELSPYLLLFILTLLFVVLGCFLDGISVVVLTTSVVLPMVLQAGID
HHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLWFGIYIVLVVEMSQITPPVGFNLFVLQSLTGRDMIFISKAALPFFFLLLFAVVIVTVF
HHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
PGIVTWLPSEMTAS
HHHHHHCCCHHCCC
>Mature Secondary Structure
MNELIIGGILLVVLFGFLASGLWVALSLLMVAISGMILLGNDAFGLIYATSTWGAVSDWS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEEEEEEECCCCCCCCCH
LAALPLFIWMGEILFRTRLSSDLFEGLTPWLGRVPGRLLHVNILSCGLFAAVSGSSAATA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCCHHHH
ATIGKMTLPELKKQGYDDKMAIATLAGSGTLGLLIPPSIILIVYGVAAEVSIGRLFIAGA
HHHCCCCHHHHHHCCCCCHHEEEEEECCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
VPGLMLVMLFMGYTMYWALRNPSKVPSDTVTYSWSVKLKALLKLIPVGLLVLFVLGSIYG
HHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHC
GLTTPTEAAAFGVVGALLLAFTGRSLTRESLVGSLMGATKTSCMILLILAGAAFLTVAMG
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
FIGLPRMLAETIAAMELSPYLLLFILTLLFVVLGCFLDGISVVVLTTSVVLPMVLQAGID
HHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PLWFGIYIVLVVEMSQITPPVGFNLFVLQSLTGRDMIFISKAALPFFFLLLFAVVIVTVF
HHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHH
PGIVTWLPSEMTAS
HHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]