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The map label for this gene is 119947145

Identifier: 119947145

GI number: 119947145

Start: 4361000

End: 4361512

Strand: Reverse

Name: 119947145

Synonym: Ping_3543

Alternate gene names: NA

Gene position: 4361512-4361000 (Counterclockwise)

Preceding gene: 119947146

Following gene: 119947143

Centisome position: 95.66

GC content: 43.66

Gene sequence:

>513_bases
ATGAAAAAGAGTGAATATTTTCCAATCGTATCTTCATCGCATTTGATGGGGAAAGATTCCGTTACGTTAAGTGAGTTTGA
ATATGCGTTAACTATGCTTAATAATGCCTTTGAACGTTGGATGCTATCGTGCAGTTTTGCCTCGGGGCTTCCTGAGCTGG
GGCCGCTTGATATTCTGGTACTTCATAATATGCATCATCGTGACCGGCCAAAACGGATCGTGGATGTTGCATTCACTCTC
AATATTGAAGATATTCATAATGTCTCCTACTCGGTGAGGAAACTTGTTAAGCGAGAACTGGTTGAAAGTGAAAGGCGTGG
GAAAGATACTTATTATAAAGTGGCAGAAAGTGGGCGAGAATTTTGCGCGGAATATCGCAAGATCCGCGAAAAATGGCTTG
TTGATGCTATCAGCAAGCTGGGCATTAGCGATCAACTGGGTGAACTTGCCGCTACCATGAGAACCTTATCGGGTATTTAT
GATCCGGCATCACGGGCCGTACGTTCATTGTAA

Upstream 100 bases:

>100_bases
TTTCTTCTTATTACTTTTCGCGGTAGTAATAGTCACAGTATTTCCGGGTATTGTCACCTGGCTACCATCGGAAATGACCG
CCAGTTAAAAAGAGGTAACT

Downstream 100 bases:

>100_bases
TCACTGATGGGAATTGCTTTTAGCCTCTGAAAAAATTCAGAGGCATTTTAAGCGTAATTAACTTAGTCTCCGCAGGTAAA
CCTGTGAAAATATAAACACC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator; MarR Family Regulatory Helix-Turn-Helix Protein; Transcription Regulator MarR-Type HTH Domain; Transcriptional Regulatory Protein

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKKSEYFPIVSSSHLMGKDSVTLSEFEYALTMLNNAFERWMLSCSFASGLPELGPLDILVLHNMHHRDRPKRIVDVAFTL
NIEDIHNVSYSVRKLVKRELVESERRGKDTYYKVAESGREFCAEYRKIREKWLVDAISKLGISDQLGELAATMRTLSGIY
DPASRAVRSL

Sequences:

>Translated_170_residues
MKKSEYFPIVSSSHLMGKDSVTLSEFEYALTMLNNAFERWMLSCSFASGLPELGPLDILVLHNMHHRDRPKRIVDVAFTL
NIEDIHNVSYSVRKLVKRELVESERRGKDTYYKVAESGREFCAEYRKIREKWLVDAISKLGISDQLGELAATMRTLSGIY
DPASRAVRSL
>Mature_170_residues
MKKSEYFPIVSSSHLMGKDSVTLSEFEYALTMLNNAFERWMLSCSFASGLPELGPLDILVLHNMHHRDRPKRIVDVAFTL
NIEDIHNVSYSVRKLVKRELVESERRGKDTYYKVAESGREFCAEYRKIREKWLVDAISKLGISDQLGELAATMRTLSGIY
DPASRAVRSL

Specific function: Unknown

COG id: COG5631

COG function: function code K; Predicted transcription regulator, contains HTH domain (MarR family)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19490; Mature: 19490

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSEYFPIVSSSHLMGKDSVTLSEFEYALTMLNNAFERWMLSCSFASGLPELGPLDILV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LHNMHHRDRPKRIVDVAFTLNIEDIHNVSYSVRKLVKRELVESERRGKDTYYKVAESGRE
HHCCCCCCCCHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FCAEYRKIREKWLVDAISKLGISDQLGELAATMRTLSGIYDPASRAVRSL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure
MKKSEYFPIVSSSHLMGKDSVTLSEFEYALTMLNNAFERWMLSCSFASGLPELGPLDILV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
LHNMHHRDRPKRIVDVAFTLNIEDIHNVSYSVRKLVKRELVESERRGKDTYYKVAESGRE
HHCCCCCCCCHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
FCAEYRKIREKWLVDAISKLGISDQLGELAATMRTLSGIYDPASRAVRSL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA