Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119947097
Identifier: 119947097
GI number: 119947097
Start: 4326063
End: 4327493
Strand: Reverse
Name: 119947097
Synonym: Ping_3495
Alternate gene names: NA
Gene position: 4327493-4326063 (Counterclockwise)
Preceding gene: 119947098
Following gene: 119947096
Centisome position: 94.91
GC content: 41.44
Gene sequence:
>1431_bases TTGAGTCTATTTCAGCAACGTTTATTAGCTGAAGGTGTACGCACTGTTGAAAGTGATTACCCCGCTTTATCCGCGCCCAT TTTAAACAAGGCTGAGGCAAGCTTTGAGCTGCTGCTGCTGGATCGTGCAAAACAGCTGGATCAGGCGCTGCAAATCTCCA CGCTCTTTACCCATTTTAAGGCCTTAACTAATAACCTGTTTGCTTTGTTATCTGTGCTTTTATTAGTGCTGGGAGCAGGC AGCGTAGGGCAACTTTTTAGTGAGCAGGGTACGCAGATAAACTTTTTTTGGGCGTTTGGACTGTTTTTTATTCCCAATCT GCTCGCATTGTGTATCTGGTTATTCCTGTTTTTACAAAGCAATCTATTAAGCGCTGGCTGGCTGGCTCATTTTAGTCTTT TTTTATTCAAAACCGCTGAAAAACGTTTTAATCCGCAAGCAACACTGCATCCATATTTTTGGCCGCTATTTAAATGTTAT TTTAAAATTATTTTGTCCGGTGATTTAGGACGTTATCAGTTATCTTATGTCACTCATCTGTTGTGGTTAAGTTATTTTTT TGGTGCAACCATCATGCTGGTTATTATGCTGGCGACCCATCAGGTCGACTTTATTTGGGAGACCAGTATCTTGTCGGCGC AAAGCTTTCAGTGGTTAACGGAAGTGCTCGCTTATATTCCCAATCTATTGGGAGTGACAGTGCCTAACACACAGCTGATA CAGCAAAGCCATTTAGGGGCGGTTAATGTACTTGCTGATGCGCAAAACAGCCGTCTGGTTTGGTCTAGTCTATTAATCAG CAGCTTATTAATTTACGGTATATTGCCGCGCTTCTTGTTGTTGTTATTGATGCGCTTTTTATTGACTAAAAACAAAGAGC GATTCCATTTAACCTTAAGTGGCCCTTATTACGTGCAATTACGGCAACAGTTAAAACCTAATGTCACATCGCTGGGTATT AAAGATCCTGATTTATCTCAAATTGAAGCCGCTCACCCCCCGCACTTGCAAACTCCATGTCATGAACTGCCATCCTGTTT TTATCCGGTGGCAGTCGAGCTATCGGAAAGACAATTTATTGAATGCCAGAAACACGTTAAGCACTCTTCTCCTGAGCAGT TGGCGCTATTAAAAAATGTTTGTGATTTTCAAGCTCAGCAGCACTTATTAAATGAGATTAAAACCATTCAGCAAAAAGCG GTCGTATTATACGTCACTCTGGCGCGCCTACCGGATCGTGGTTTATTGACCTTTATTAAATCATTAACTCATTTAACCTC AACATCGTTTTACTTATTACTGATAGATGAAGGCCTGATGGTCTCATCCCATATAAGCAAGCGGCGCAGTGATTGGTATC AGCTTGCAGCACAAGCTAATATCCCATTAGAGAATATTATTCAGTTCCAAACCGGAGGGTTAGATGAATAA
Upstream 100 bases:
>100_bases TGGATGATAAGGGGCAAATTGATGCTTCTGATGATTGGTGGCTGGCGGTTCGTTCATCTGTAAAGAGTCTGAAAACTAAA TAAGTTCGGGAGAAGTTTCA
Downstream 100 bases:
>100_bases AAAAGGTTTGTCGGTGGCGGTAGTAGGCCATGCAAATGCTGGAAAAACCTCCTTAATGCGTACTTTATTACGTGATCCGG AGTTTGGCGAAGTGGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MSLFQQRLLAEGVRTVESDYPALSAPILNKAEASFELLLLDRAKQLDQALQISTLFTHFKALTNNLFALLSVLLLVLGAG SVGQLFSEQGTQINFFWAFGLFFIPNLLALCIWLFLFLQSNLLSAGWLAHFSLFLFKTAEKRFNPQATLHPYFWPLFKCY FKIILSGDLGRYQLSYVTHLLWLSYFFGATIMLVIMLATHQVDFIWETSILSAQSFQWLTEVLAYIPNLLGVTVPNTQLI QQSHLGAVNVLADAQNSRLVWSSLLISSLLIYGILPRFLLLLLMRFLLTKNKERFHLTLSGPYYVQLRQQLKPNVTSLGI KDPDLSQIEAAHPPHLQTPCHELPSCFYPVAVELSERQFIECQKHVKHSSPEQLALLKNVCDFQAQQHLLNEIKTIQQKA VVLYVTLARLPDRGLLTFIKSLTHLTSTSFYLLLIDEGLMVSSHISKRRSDWYQLAAQANIPLENIIQFQTGGLDE
Sequences:
>Translated_476_residues MSLFQQRLLAEGVRTVESDYPALSAPILNKAEASFELLLLDRAKQLDQALQISTLFTHFKALTNNLFALLSVLLLVLGAG SVGQLFSEQGTQINFFWAFGLFFIPNLLALCIWLFLFLQSNLLSAGWLAHFSLFLFKTAEKRFNPQATLHPYFWPLFKCY FKIILSGDLGRYQLSYVTHLLWLSYFFGATIMLVIMLATHQVDFIWETSILSAQSFQWLTEVLAYIPNLLGVTVPNTQLI QQSHLGAVNVLADAQNSRLVWSSLLISSLLIYGILPRFLLLLLMRFLLTKNKERFHLTLSGPYYVQLRQQLKPNVTSLGI KDPDLSQIEAAHPPHLQTPCHELPSCFYPVAVELSERQFIECQKHVKHSSPEQLALLKNVCDFQAQQHLLNEIKTIQQKA VVLYVTLARLPDRGLLTFIKSLTHLTSTSFYLLLIDEGLMVSSHISKRRSDWYQLAAQANIPLENIIQFQTGGLDE >Mature_475_residues SLFQQRLLAEGVRTVESDYPALSAPILNKAEASFELLLLDRAKQLDQALQISTLFTHFKALTNNLFALLSVLLLVLGAGS VGQLFSEQGTQINFFWAFGLFFIPNLLALCIWLFLFLQSNLLSAGWLAHFSLFLFKTAEKRFNPQATLHPYFWPLFKCYF KIILSGDLGRYQLSYVTHLLWLSYFFGATIMLVIMLATHQVDFIWETSILSAQSFQWLTEVLAYIPNLLGVTVPNTQLIQ QSHLGAVNVLADAQNSRLVWSSLLISSLLIYGILPRFLLLLLMRFLLTKNKERFHLTLSGPYYVQLRQQLKPNVTSLGIK DPDLSQIEAAHPPHLQTPCHELPSCFYPVAVELSERQFIECQKHVKHSSPEQLALLKNVCDFQAQQHLLNEIKTIQQKAV VLYVTLARLPDRGLLTFIKSLTHLTSTSFYLLLIDEGLMVSSHISKRRSDWYQLAAQANIPLENIIQFQTGGLDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021296 [H]
Pfam domain/function: PF11067 DUF2868 [H]
EC number: NA
Molecular weight: Translated: 54158; Mature: 54027
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFQQRLLAEGVRTVESDYPALSAPILNKAEASFELLLLDRAKQLDQALQISTLFTHFK CCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALTNNLFALLSVLLLVLGAGSVGQLFSEQGTQINFFWAFGLFFIPNLLALCIWLFLFLQS HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH NLLSAGWLAHFSLFLFKTAEKRFNPQATLHPYFWPLFKCYFKIILSGDLGRYQLSYVTHL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LWLSYFFGATIMLVIMLATHQVDFIWETSILSAQSFQWLTEVLAYIPNLLGVTVPNTQLI HHHHHHHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH QQSHLGAVNVLADAQNSRLVWSSLLISSLLIYGILPRFLLLLLMRFLLTKNKERFHLTLS HHHCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC GPYYVQLRQQLKPNVTSLGIKDPDLSQIEAAHPPHLQTPCHELPSCFYPVAVELSERQFI CCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHH ECQKHVKHSSPEQLALLKNVCDFQAQQHLLNEIKTIQQKAVVLYVTLARLPDRGLLTFIK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHH SLTHLTSTSFYLLLIDEGLMVSSHISKRRSDWYQLAAQANIPLENIIQFQTGGLDE HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC >Mature Secondary Structure SLFQQRLLAEGVRTVESDYPALSAPILNKAEASFELLLLDRAKQLDQALQISTLFTHFK CHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALTNNLFALLSVLLLVLGAGSVGQLFSEQGTQINFFWAFGLFFIPNLLALCIWLFLFLQS HHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHH NLLSAGWLAHFSLFLFKTAEKRFNPQATLHPYFWPLFKCYFKIILSGDLGRYQLSYVTHL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LWLSYFFGATIMLVIMLATHQVDFIWETSILSAQSFQWLTEVLAYIPNLLGVTVPNTQLI HHHHHHHHHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH QQSHLGAVNVLADAQNSRLVWSSLLISSLLIYGILPRFLLLLLMRFLLTKNKERFHLTLS HHHCCCHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEC GPYYVQLRQQLKPNVTSLGIKDPDLSQIEAAHPPHLQTPCHELPSCFYPVAVELSERQFI CCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHH ECQKHVKHSSPEQLALLKNVCDFQAQQHLLNEIKTIQQKAVVLYVTLARLPDRGLLTFIK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHH SLTHLTSTSFYLLLIDEGLMVSSHISKRRSDWYQLAAQANIPLENIIQFQTGGLDE HHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10710307 [H]