Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119947061
Identifier: 119947061
GI number: 119947061
Start: 4278566
End: 4281166
Strand: Reverse
Name: 119947061
Synonym: Ping_3459
Alternate gene names: NA
Gene position: 4281166-4278566 (Counterclockwise)
Preceding gene: 119947062
Following gene: 119947060
Centisome position: 93.89
GC content: 29.95
Gene sequence:
>2601_bases GTGTCTCATATAGAACAGCAAGAGTTTTGTCAATCAGTTAGATTAAAGTTTTCTTCATTTTTTGAGTATAAATTTGTGCT TGATATTGGGTGTCTCGATATTAATGGCAATAATAATGCTTTTTTTAGTGGTTGTAATTATTTAGGTCTTGATGTGGCAC AAGGTCGGAATGTTGATATTATAACTCCAGGGCATGAGCTTGGTATGCCAGATGCAACATTTGACACAATTGTTTCGACA GAATGTTTTGAACATGATCAGTTTTATGAGAAAACCATAAAAAACATTTATCGAATGTTGAAACCTGGTGGCTTATTTTT ATTCACTTGTGCAACGACAGGGCGACCTGAACATGGAACTAAAAGAACCACACCAGATGATGCTCCATTACTACAAAGTT TTGAGGGTTGGAGCGATTATTATAAAAATTTAGAGGAAGATGATATCAAAGCTATTTTTGATGATTTTGATTCTTTATTT AATGAATATTGTTTTTCTACTAATGACAAAACCAAAGATTTATATTTTTGGGGCTTTAAATCTGGTGAATATGAACCAAG AAGTGACTATTCCTTTATAATTAATCCTGAAAATAATGCCAAAAACATATTAGAGATTAAAAATAGTCAGGAAGAAACAT TAGAAATTCTAAAAAAACAAACTGAAGAAAAAGTACAATATGAGAATAAAATTAATTCATTAGAGAGTAAACATGTAATC GAATTAGAGCAATTAAATTCAACACTTCATGATTCTCAAATTGAATTAGAACAATTAAATTCAAAGCTTCACGATTCTCA AATTGAATTGTTAACGATAAAAAAAAGTATCACTTATCGATTAACATCACCCATTCGAAATTTTAAGCATTTGTTGTTAC GTGCTTATCATTCAAATAAAGTTAACCGTGTCATTCGATTATCGCAATTGTTTTATCAAAATCCTAAGATTGCACTTAAA GCAATTCAATTTGTGAAAAAATTTGGTATCAAGCAAACCGCTAAAAGATTGATTAGCGCTTCTAGTCTATTTATTCATGC TCCTGTTAGGCATATTAATATTCGTGACTATGAAAAAATATACATACTAACAACACCTCATTGCACATCGTTGGCAAAAA GAATTGAATCAAGTTTAGCTAAAATTTCATTTGAGAGTGAAGTTATTTTTGAAAAACCAAAATCTGGTTATCAAGATACG TTATATTTTGTTATTTGCCCTCAGATGTTTACTGAACTCCCAGAATTATATATTAGTTATCAGTTAGAGCAGTCAGTAAG TTCTCGTTGGTTTACTCCTGAGTATTTTTCTATTTTAGAGAATTCTTACGCGATTTTCGATTATGCTGAAAATAACATTA ATTTTTTGCAGGAAAACGGGCTTCACTATCAACAAATGTTTTATATGCCTGTTGGATATCATAAAGATTTAAAAAGTCGT ATTGATGAGGACTATCAATACGATGTTATTTTTTATGGTGATATAAATAACGCTCGTAGGAAAAAATATATAGAGGAGTT GTCTAGGAATTTCAATGTAAAAGTAATTAGAGATCTCTTTGGGGAAGAATTATATTCTGAAATAGCAAAAGCTAAAGTAG TTGTTAATATTCACTATTACGAGAATGCATTACTTGAAACAACACGAATTTATGAATCTTTAAGTTTAAATAAATTAGTT ATTTCAGAAACAAGCTCTGATATTGAACAACATCAAGATATCAAGCAATGCGTAGATTTTGTTGATATTGATGACATAGA AGCCATGATAGCTCGTATTTCTTACTGGATTGGCGATACAGAGAATATTAAAGATAAAGTAACTGAAAATATCTCCTATC TACAAAGCATAAGTGATATGTTCGAATTCTATTTTATGCGTTTCATGTTGTCTAAAGATTGTATTACATTTGATGAGTTT TACGAATTGGCGAGTAAAAATATTCATTTTGATACGAATTTTGTCTGTTTAGGTTTGCCTGAGTCCACAGGACGTAAAGT TGGTTTTGATTGTGACAATAAGTACGGTATTCAATATGTTCCGGGACTTCGTCATGATCTTGGCTGGATTGGGTGTGGGT TAAGTTATAAATTTATTATTCGTAAAGCTAAAGAGCAAAATTTTGAAACAATCACAATATGTGAAGATGATGTTGAATTT AAAACAGATTTTGAATCTCGTTATCAAAATATAAAGAACTATTTGGATGGATTGGAAAATAATTCATGGGATTTGTTTTC AGGTCTTATTGCTGACTTCAATTCGAATACTAAAGTAGATAAAATTCAAGAATATAAAGAGGAAGAATTTATTTATATTG ATAAGATGACTAGTACCGTCTTGAATGTTTATTCAAATGCTTTTTTTGATAAACTACTTGGCTGGAATGATACAAATCAT GATGCAGAGACTAATACTATTGATCGATATATAGAAAATAATGGTTGCAAAGTCATTACTACACCTGAGTATTTAGTTGG ACATAAAGAAGAGATGCATTCAACATTATGGGGATTCAATAATTCCACTTATAGTGAAATGATAAAACAGAGTAGTGAAA AATTAAATCAGAAAAAAGATTTATTTCTTCAAGCAAAATAG
Upstream 100 bases:
>100_bases TGATGCGTTGGTATTCAGATCCATGTCCACGTCTGCTAGCACTGGTTTAGTAGGTATTCCGATGAAAGACATCAAATTTA CAGTAAAATAGGCGGGTATT
Downstream 100 bases:
>100_bases TAATTGCATGATGTGATTTTAACCAACCCATATTAAATATTCCTATATGTGCTGTTTTCAATTTAGGAAGATATGTACGG AGAATTTTTTATTTTGTTAG
Product: methyltransferase type 11
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 866; Mature: 865
Protein sequence:
>866_residues MSHIEQQEFCQSVRLKFSSFFEYKFVLDIGCLDINGNNNAFFSGCNYLGLDVAQGRNVDIITPGHELGMPDATFDTIVST ECFEHDQFYEKTIKNIYRMLKPGGLFLFTCATTGRPEHGTKRTTPDDAPLLQSFEGWSDYYKNLEEDDIKAIFDDFDSLF NEYCFSTNDKTKDLYFWGFKSGEYEPRSDYSFIINPENNAKNILEIKNSQEETLEILKKQTEEKVQYENKINSLESKHVI ELEQLNSTLHDSQIELEQLNSKLHDSQIELLTIKKSITYRLTSPIRNFKHLLLRAYHSNKVNRVIRLSQLFYQNPKIALK AIQFVKKFGIKQTAKRLISASSLFIHAPVRHINIRDYEKIYILTTPHCTSLAKRIESSLAKISFESEVIFEKPKSGYQDT LYFVICPQMFTELPELYISYQLEQSVSSRWFTPEYFSILENSYAIFDYAENNINFLQENGLHYQQMFYMPVGYHKDLKSR IDEDYQYDVIFYGDINNARRKKYIEELSRNFNVKVIRDLFGEELYSEIAKAKVVVNIHYYENALLETTRIYESLSLNKLV ISETSSDIEQHQDIKQCVDFVDIDDIEAMIARISYWIGDTENIKDKVTENISYLQSISDMFEFYFMRFMLSKDCITFDEF YELASKNIHFDTNFVCLGLPESTGRKVGFDCDNKYGIQYVPGLRHDLGWIGCGLSYKFIIRKAKEQNFETITICEDDVEF KTDFESRYQNIKNYLDGLENNSWDLFSGLIADFNSNTKVDKIQEYKEEEFIYIDKMTSTVLNVYSNAFFDKLLGWNDTNH DAETNTIDRYIENNGCKVITTPEYLVGHKEEMHSTLWGFNNSTYSEMIKQSSEKLNQKKDLFLQAK
Sequences:
>Translated_866_residues MSHIEQQEFCQSVRLKFSSFFEYKFVLDIGCLDINGNNNAFFSGCNYLGLDVAQGRNVDIITPGHELGMPDATFDTIVST ECFEHDQFYEKTIKNIYRMLKPGGLFLFTCATTGRPEHGTKRTTPDDAPLLQSFEGWSDYYKNLEEDDIKAIFDDFDSLF NEYCFSTNDKTKDLYFWGFKSGEYEPRSDYSFIINPENNAKNILEIKNSQEETLEILKKQTEEKVQYENKINSLESKHVI ELEQLNSTLHDSQIELEQLNSKLHDSQIELLTIKKSITYRLTSPIRNFKHLLLRAYHSNKVNRVIRLSQLFYQNPKIALK AIQFVKKFGIKQTAKRLISASSLFIHAPVRHINIRDYEKIYILTTPHCTSLAKRIESSLAKISFESEVIFEKPKSGYQDT LYFVICPQMFTELPELYISYQLEQSVSSRWFTPEYFSILENSYAIFDYAENNINFLQENGLHYQQMFYMPVGYHKDLKSR IDEDYQYDVIFYGDINNARRKKYIEELSRNFNVKVIRDLFGEELYSEIAKAKVVVNIHYYENALLETTRIYESLSLNKLV ISETSSDIEQHQDIKQCVDFVDIDDIEAMIARISYWIGDTENIKDKVTENISYLQSISDMFEFYFMRFMLSKDCITFDEF YELASKNIHFDTNFVCLGLPESTGRKVGFDCDNKYGIQYVPGLRHDLGWIGCGLSYKFIIRKAKEQNFETITICEDDVEF KTDFESRYQNIKNYLDGLENNSWDLFSGLIADFNSNTKVDKIQEYKEEEFIYIDKMTSTVLNVYSNAFFDKLLGWNDTNH DAETNTIDRYIENNGCKVITTPEYLVGHKEEMHSTLWGFNNSTYSEMIKQSSEKLNQKKDLFLQAK >Mature_865_residues SHIEQQEFCQSVRLKFSSFFEYKFVLDIGCLDINGNNNAFFSGCNYLGLDVAQGRNVDIITPGHELGMPDATFDTIVSTE CFEHDQFYEKTIKNIYRMLKPGGLFLFTCATTGRPEHGTKRTTPDDAPLLQSFEGWSDYYKNLEEDDIKAIFDDFDSLFN EYCFSTNDKTKDLYFWGFKSGEYEPRSDYSFIINPENNAKNILEIKNSQEETLEILKKQTEEKVQYENKINSLESKHVIE LEQLNSTLHDSQIELEQLNSKLHDSQIELLTIKKSITYRLTSPIRNFKHLLLRAYHSNKVNRVIRLSQLFYQNPKIALKA IQFVKKFGIKQTAKRLISASSLFIHAPVRHINIRDYEKIYILTTPHCTSLAKRIESSLAKISFESEVIFEKPKSGYQDTL YFVICPQMFTELPELYISYQLEQSVSSRWFTPEYFSILENSYAIFDYAENNINFLQENGLHYQQMFYMPVGYHKDLKSRI DEDYQYDVIFYGDINNARRKKYIEELSRNFNVKVIRDLFGEELYSEIAKAKVVVNIHYYENALLETTRIYESLSLNKLVI SETSSDIEQHQDIKQCVDFVDIDDIEAMIARISYWIGDTENIKDKVTENISYLQSISDMFEFYFMRFMLSKDCITFDEFY ELASKNIHFDTNFVCLGLPESTGRKVGFDCDNKYGIQYVPGLRHDLGWIGCGLSYKFIIRKAKEQNFETITICEDDVEFK TDFESRYQNIKNYLDGLENNSWDLFSGLIADFNSNTKVDKIQEYKEEEFIYIDKMTSTVLNVYSNAFFDKLLGWNDTNHD AETNTIDRYIENNGCKVITTPEYLVGHKEEMHSTLWGFNNSTYSEMIKQSSEKLNQKKDLFLQAK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 101480; Mature: 101349
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHIEQQEFCQSVRLKFSSFFEYKFVLDIGCLDINGNNNAFFSGCNYLGLDVAQGRNVDI CCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCEEEECCCEEEEEECCCCCEEE ITPGHELGMPDATFDTIVSTECFEHDQFYEKTIKNIYRMLKPGGLFLFTCATTGRPEHGT ECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC KRTTPDDAPLLQSFEGWSDYYKNLEEDDIKAIFDDFDSLFNEYCFSTNDKTKDLYFWGFK CCCCCCCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC SGEYEPRSDYSFIINPENNAKNILEIKNSQEETLEILKKQTEEKVQYENKINSLESKHVI CCCCCCCCCCEEEECCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE ELEQLNSTLHDSQIELEQLNSKLHDSQIELLTIKKSITYRLTSPIRNFKHLLLRAYHSNK EHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEHHHHEEEHHHHHHHHHHHHHHHHHHH VNRVIRLSQLFYQNPKIALKAIQFVKKFGIKQTAKRLISASSLFIHAPVRHINIRDYEKI HHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEECCEEEECCCCCCEE YILTTPHCTSLAKRIESSLAKISFESEVIFEKPKSGYQDTLYFVICPQMFTELPELYISY EEEECCCHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCEEEEEECHHHHHHHHHHHHHH QLEQSVSSRWFTPEYFSILENSYAIFDYAENNINFLQENGLHYQQMFYMPVGYHKDLKSR HHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCHHHCCCCEEEHEEEECCCCHHHHHHH IDEDYQYDVIFYGDINNARRKKYIEELSRNFNVKVIRDLFGEELYSEIAKAKVVVNIHYY CCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEH ENALLETTRIYESLSLNKLVISETSSDIEQHQDIKQCVDFVDIDDIEAMIARISYWIGDT HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC ENIKDKVTENISYLQSISDMFEFYFMRFMLSKDCITFDEFYELASKNIHFDTNFVCLGLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCEEEEECC ESTGRKVGFDCDNKYGIQYVPGLRHDLGWIGCGLSYKFIIRKAKEQNFETITICEDDVEF CCCCCEECCCCCCCCCCEECCCCCCCCCCEECCCHHHHHHHHHHHCCCCEEEEECCCCCH KTDFESRYQNIKNYLDGLENNSWDLFSGLIADFNSNTKVDKIQEYKEEEFIYIDKMTSTV HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEHHHHHH LNVYSNAFFDKLLGWNDTNHDAETNTIDRYIENNGCKVITTPEYLVGHKEEMHSTLWGFN HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHCCHHHHHHHHHCCC NSTYSEMIKQSSEKLNQKKDLFLQAK CCHHHHHHHHHHHHCCHHHCEEEECC >Mature Secondary Structure SHIEQQEFCQSVRLKFSSFFEYKFVLDIGCLDINGNNNAFFSGCNYLGLDVAQGRNVDI CCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEEECCCCCEEEECCCEEEEEECCCCCEEE ITPGHELGMPDATFDTIVSTECFEHDQFYEKTIKNIYRMLKPGGLFLFTCATTGRPEHGT ECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCC KRTTPDDAPLLQSFEGWSDYYKNLEEDDIKAIFDDFDSLFNEYCFSTNDKTKDLYFWGFK CCCCCCCCHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC SGEYEPRSDYSFIINPENNAKNILEIKNSQEETLEILKKQTEEKVQYENKINSLESKHVI CCCCCCCCCCEEEECCCCCCCHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE ELEQLNSTLHDSQIELEQLNSKLHDSQIELLTIKKSITYRLTSPIRNFKHLLLRAYHSNK EHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEHHHHEEEHHHHHHHHHHHHHHHHHHH VNRVIRLSQLFYQNPKIALKAIQFVKKFGIKQTAKRLISASSLFIHAPVRHINIRDYEKI HHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCEEEECCEEEECCCCCCEE YILTTPHCTSLAKRIESSLAKISFESEVIFEKPKSGYQDTLYFVICPQMFTELPELYISY EEEECCCHHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCEEEEEECHHHHHHHHHHHHHH QLEQSVSSRWFTPEYFSILENSYAIFDYAENNINFLQENGLHYQQMFYMPVGYHKDLKSR HHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCCCHHHCCCCEEEHEEEECCCCHHHHHHH IDEDYQYDVIFYGDINNARRKKYIEELSRNFNVKVIRDLFGEELYSEIAKAKVVVNIHYY CCCCCEEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEH ENALLETTRIYESLSLNKLVISETSSDIEQHQDIKQCVDFVDIDDIEAMIARISYWIGDT HHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC ENIKDKVTENISYLQSISDMFEFYFMRFMLSKDCITFDEFYELASKNIHFDTNFVCLGLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEECCCEEEEECC ESTGRKVGFDCDNKYGIQYVPGLRHDLGWIGCGLSYKFIIRKAKEQNFETITICEDDVEF CCCCCEECCCCCCCCCCEECCCCCCCCCCEECCCHHHHHHHHHHHCCCCEEEEECCCCCH KTDFESRYQNIKNYLDGLENNSWDLFSGLIADFNSNTKVDKIQEYKEEEFIYIDKMTSTV HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEHHHHHH LNVYSNAFFDKLLGWNDTNHDAETNTIDRYIENNGCKVITTPEYLVGHKEEMHSTLWGFN HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHCCHHHHHHHHHCCC NSTYSEMIKQSSEKLNQKKDLFLQAK CCHHHHHHHHHHHHCCHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA