Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is fusA1 [H]
Identifier: 119947041
GI number: 119947041
Start: 4250713
End: 4252806
Strand: Reverse
Name: fusA1 [H]
Synonym: Ping_3438
Alternate gene names: 119947041
Gene position: 4252806-4250713 (Counterclockwise)
Preceding gene: 119947042
Following gene: 119947040
Centisome position: 93.27
GC content: 45.03
Gene sequence:
>2094_bases TTGTCACGTACAACTCCTATCGAGCGCTACCGAAACATTGGCATTGTTGCTCATGTCGATGCGGGTAAAACAACAACGAC AGAGCGTGTATTGTTCTACACAGGTGTATCTCACAAAATGGGTGAGGTACATAATGGTGCAGCAACAATGGACTGGATGG AGCAGGAGCAGGAGCGTGGTATCACTATTACCTCCGCCGCGACGACGACATTCTGGTCAGGCATGCAGGGACAGTACGAA CAACACCGTATCAATATTATTGATACTCCAGGACATGTTGATTTCACTATCGAAGTTGAACGTTCATTACGAGTCTTAGA TGGTGCGGTTGTGGTGTTTTGCGCCTTGTCCGGTGTTGAACCTCAATCAGAAACCGTTTGGCGTCAAGCTAACAAATACC ACGTTCCGCGTATTGTATTTGTGAATAAGATGGATCGGACAGGTGCTGATTTTGAAGCTGTAGTTGCACAAATCCAAGCT CGTTTAGGCGCAATTTGTGTTCCAATTCATTTGAATATTGGGGCAGAAGATGAGTTTAAAGGTGTCATCGACCTGATTAA AATGAAGGCGATTAATTGGATCGATACAGATCAGGGAATGACCTTTGAATATTACGACATTCCAGCTGATCTACAGGAGC GTGCAGAGCAACTGCACGAAGAACTTGTAGAAGTAGCGGCTGAAGCAAACGACTTTCTGACGGAAAAATACCTTGAAGAA GGTGCTCTTTCTATCGAGGAAATCAAAGCTGGTTTACGTATCCGTACGTTAAACAATGAAATTGTACTGGCAACCTGCGG CAGCGCTTTTAAAAATAAAGGTGTGCAGTCGGTGTTAGATGCTGTTATTGACTTTCTTCCTTCTCCTTCGGAAGTTGCCG CAATTAAAGGCATGGATGAAAAAGAGAATGAAGTTGAATGTCCAGCGACTGATGAAGCTCCCTTTGCTGCATTGGCGTTT AAAATTGCAACGGATCCCTTTGTGGGAACGTTAACATTTATGCGCGTATATTCAGGGGTGGTTAATTCAGGGGATCATGT TTATAACTCAGTGAAAATGAAGAAAGAGCGTTTTGGCCGTATCGTTCAGATGCATGCCAATGACCGTAAAGAGATCAAAG AGGTGCGCGCCGGTGATATCGCTGCTGCAATCGGCCTTAAAGATGTTACTACGGGCGATACGCTTTGTTCTCCTGAGCAT AAAGTGATTCTTGAGCGCATGGAGTTTCCTGAACCGGTAATTCAAATCGCGGTTGAGCCTAGAACGAAGGCCGACCAAGA TAAACTGACTATCGCATTAGAGAAGCTGGCTGCTGAAGATCCCTCTTTCCGTGTTGAAACGAATGAGGAATCCGGGCAGA TCCTGATCTCCGGTATGGGTGAACTTCACCTGGATATTATCGTGGATCGTATGCGTCGTGAGTTTGGTGTGAACTGTAAC GTGGGTCATCCACAAGTAGCGTATCGAGAAACTATCCGTAAAACGGTTTCAGTGGAAGGGAAATTTATTCGTCAGGGCGA AGGACCTAGCCATTATGGGCATGTCCATCTTAAACTTGAACCGCTTAAACCAGGTTCTGGCTTTGAATTTGTTAACGAAA TTGTCGGAAAAACTATTCCAAAGGAATATATCCCGGCCGTTAGCAAAGGCTGTGAAGAACAAATGAACCAAGGTGTGCTT GCTGGATACCCAATGCTGGATGTGCGAGTGACTTTATTTGATGGTTCATTCCATGAAGTTGACTCAAGTGAGATGGCATT TAAGATTGCAGGTATGATAGGCTTTAGAAACGGGGCATTACAAGCTGATGCGACTATTCTTGAGCCTGTTATGAATGTTG AAGTAACTACGCCGGAAGATTGGATGGGTGATGTTGTGGGTGACCTTAGTCGTCGCCGCGGTATGATTGAAGGTATGGAT GATGGCCTTGGCGGCGTTAAAATCGTGCATGCTAAAGTACCGCTTGCTGAGATGTTCGGTTATGCAACCGCATTACGCTC GGCAACTCAGGGACGCGCATCTTATTCAATGGAGTTTTCAGAATATGCGGACGCGCCTAAAAAAATAGCTAACGCAATTA TTGAAGCGAAATAA
Upstream 100 bases:
>100_bases CAAAGCGTTTGCTCACTACCGCTGGTAGGAATCTAGCACAAGCTTTTGCTTGTGCTTTTCGTTTCGATAAAAGTTTAGTT ATATTTAAAAGGACATCATT
Downstream 100 bases:
>100_bases AAAATAAATTAAACTATCATCTTTCCATGTGATGGCATGTGGAGAGGTATTAACTGATAAAGAAGGTACACACTGTGTCT AAAGCAAAATTTGAACGTAA
Product: translation elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G 1 [H]
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MSRTTPIERYRNIGIVAHVDAGKTTTTERVLFYTGVSHKMGEVHNGAATMDWMEQEQERGITITSAATTTFWSGMQGQYE QHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCALSGVEPQSETVWRQANKYHVPRIVFVNKMDRTGADFEAVVAQIQA RLGAICVPIHLNIGAEDEFKGVIDLIKMKAINWIDTDQGMTFEYYDIPADLQERAEQLHEELVEVAAEANDFLTEKYLEE GALSIEEIKAGLRIRTLNNEIVLATCGSAFKNKGVQSVLDAVIDFLPSPSEVAAIKGMDEKENEVECPATDEAPFAALAF KIATDPFVGTLTFMRVYSGVVNSGDHVYNSVKMKKERFGRIVQMHANDRKEIKEVRAGDIAAAIGLKDVTTGDTLCSPEH KVILERMEFPEPVIQIAVEPRTKADQDKLTIALEKLAAEDPSFRVETNEESGQILISGMGELHLDIIVDRMRREFGVNCN VGHPQVAYRETIRKTVSVEGKFIRQGEGPSHYGHVHLKLEPLKPGSGFEFVNEIVGKTIPKEYIPAVSKGCEEQMNQGVL AGYPMLDVRVTLFDGSFHEVDSSEMAFKIAGMIGFRNGALQADATILEPVMNVEVTTPEDWMGDVVGDLSRRRGMIEGMD DGLGGVKIVHAKVPLAEMFGYATALRSATQGRASYSMEFSEYADAPKKIANAIIEAK
Sequences:
>Translated_697_residues MSRTTPIERYRNIGIVAHVDAGKTTTTERVLFYTGVSHKMGEVHNGAATMDWMEQEQERGITITSAATTTFWSGMQGQYE QHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCALSGVEPQSETVWRQANKYHVPRIVFVNKMDRTGADFEAVVAQIQA RLGAICVPIHLNIGAEDEFKGVIDLIKMKAINWIDTDQGMTFEYYDIPADLQERAEQLHEELVEVAAEANDFLTEKYLEE GALSIEEIKAGLRIRTLNNEIVLATCGSAFKNKGVQSVLDAVIDFLPSPSEVAAIKGMDEKENEVECPATDEAPFAALAF KIATDPFVGTLTFMRVYSGVVNSGDHVYNSVKMKKERFGRIVQMHANDRKEIKEVRAGDIAAAIGLKDVTTGDTLCSPEH KVILERMEFPEPVIQIAVEPRTKADQDKLTIALEKLAAEDPSFRVETNEESGQILISGMGELHLDIIVDRMRREFGVNCN VGHPQVAYRETIRKTVSVEGKFIRQGEGPSHYGHVHLKLEPLKPGSGFEFVNEIVGKTIPKEYIPAVSKGCEEQMNQGVL AGYPMLDVRVTLFDGSFHEVDSSEMAFKIAGMIGFRNGALQADATILEPVMNVEVTTPEDWMGDVVGDLSRRRGMIEGMD DGLGGVKIVHAKVPLAEMFGYATALRSATQGRASYSMEFSEYADAPKKIANAIIEAK >Mature_696_residues SRTTPIERYRNIGIVAHVDAGKTTTTERVLFYTGVSHKMGEVHNGAATMDWMEQEQERGITITSAATTTFWSGMQGQYEQ HRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCALSGVEPQSETVWRQANKYHVPRIVFVNKMDRTGADFEAVVAQIQAR LGAICVPIHLNIGAEDEFKGVIDLIKMKAINWIDTDQGMTFEYYDIPADLQERAEQLHEELVEVAAEANDFLTEKYLEEG ALSIEEIKAGLRIRTLNNEIVLATCGSAFKNKGVQSVLDAVIDFLPSPSEVAAIKGMDEKENEVECPATDEAPFAALAFK IATDPFVGTLTFMRVYSGVVNSGDHVYNSVKMKKERFGRIVQMHANDRKEIKEVRAGDIAAAIGLKDVTTGDTLCSPEHK VILERMEFPEPVIQIAVEPRTKADQDKLTIALEKLAAEDPSFRVETNEESGQILISGMGELHLDIIVDRMRREFGVNCNV GHPQVAYRETIRKTVSVEGKFIRQGEGPSHYGHVHLKLEPLKPGSGFEFVNEIVGKTIPKEYIPAVSKGCEEQMNQGVLA GYPMLDVRVTLFDGSFHEVDSSEMAFKIAGMIGFRNGALQADATILEPVMNVEVTTPEDWMGDVVGDLSRRRGMIEGMDD GLGGVKIVHAKVPLAEMFGYATALRSATQGRASYSMEFSEYADAPKKIANAIIEAK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=694, Percent_Identity=42.7953890489914, Blast_Score=543, Evalue=1e-154, Organism=Homo sapiens, GI19923640, Length=719, Percent_Identity=38.8038942976356, Blast_Score=448, Evalue=1e-126, Organism=Homo sapiens, GI25306283, Length=456, Percent_Identity=40.3508771929825, Blast_Score=298, Evalue=8e-81, Organism=Homo sapiens, GI25306287, Length=297, Percent_Identity=47.4747474747475, Blast_Score=251, Evalue=1e-66, Organism=Homo sapiens, GI217272894, Length=807, Percent_Identity=23.7918215613383, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI217272892, Length=807, Percent_Identity=23.7918215613383, Blast_Score=130, Evalue=5e-30, Organism=Homo sapiens, GI157426893, Length=208, Percent_Identity=33.6538461538462, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI4503483, Length=419, Percent_Identity=26.2529832935561, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI94966754, Length=138, Percent_Identity=39.8550724637681, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=40, Blast_Score=85, Evalue=3e-16, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=40, Blast_Score=85, Evalue=3e-16, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=40, Blast_Score=85, Evalue=3e-16, Organism=Homo sapiens, GI94966752, Length=67, Percent_Identity=44.7761194029851, Blast_Score=70, Evalue=8e-12, Organism=Escherichia coli, GI1789738, Length=703, Percent_Identity=69.5590327169274, Blast_Score=998, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=491, Percent_Identity=28.1059063136456, Blast_Score=156, Evalue=5e-39, Organism=Escherichia coli, GI48994988, Length=348, Percent_Identity=29.0229885057471, Blast_Score=112, Evalue=6e-26, Organism=Escherichia coli, GI1788922, Length=154, Percent_Identity=38.3116883116883, Blast_Score=98, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17533571, Length=690, Percent_Identity=40.4347826086956, Blast_Score=495, Evalue=1e-140, Organism=Caenorhabditis elegans, GI17556745, Length=723, Percent_Identity=30.1521438450899, Blast_Score=306, Evalue=3e-83, Organism=Caenorhabditis elegans, GI17506493, Length=422, Percent_Identity=26.0663507109005, Blast_Score=102, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17557151, Length=160, Percent_Identity=38.125, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71988819, Length=144, Percent_Identity=37.5, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71988811, Length=145, Percent_Identity=37.2413793103448, Blast_Score=84, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6323098, Length=693, Percent_Identity=40.981240981241, Blast_Score=521, Evalue=1e-148, Organism=Saccharomyces cerevisiae, GI6322359, Length=783, Percent_Identity=31.2899106002554, Blast_Score=370, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6324707, Length=486, Percent_Identity=26.3374485596708, Blast_Score=110, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6320593, Length=486, Percent_Identity=26.3374485596708, Blast_Score=110, Evalue=7e-25, Organism=Saccharomyces cerevisiae, GI6323320, Length=153, Percent_Identity=35.2941176470588, Blast_Score=94, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6324166, Length=174, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=6e-17, Organism=Drosophila melanogaster, GI24582462, Length=710, Percent_Identity=43.5211267605634, Blast_Score=565, Evalue=1e-161, Organism=Drosophila melanogaster, GI221458488, Length=725, Percent_Identity=32.1379310344828, Blast_Score=347, Evalue=2e-95, Organism=Drosophila melanogaster, GI21357743, Length=803, Percent_Identity=23.1631382316314, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI78706572, Length=158, Percent_Identity=37.3417721518987, Blast_Score=102, Evalue=9e-22, Organism=Drosophila melanogaster, GI24585709, Length=151, Percent_Identity=40.3973509933775, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI24585711, Length=151, Percent_Identity=40.3973509933775, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI24585713, Length=151, Percent_Identity=40.3973509933775, Blast_Score=99, Evalue=1e-20, Organism=Drosophila melanogaster, GI28574573, Length=173, Percent_Identity=35.8381502890173, Blast_Score=89, Evalue=1e-17,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77024; Mature: 76892
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTTPIERYRNIGIVAHVDAGKTTTTERVLFYTGVSHKMGEVHNGAATMDWMEQEQERG CCCCCCHHHHHCCCEEEEECCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHCC ITITSAATTTFWSGMQGQYEQHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCALSGVE EEEEECCHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHEEEHHHCCCC PQSETVWRQANKYHVPRIVFVNKMDRTGADFEAVVAQIQARLGAICVPIHLNIGAEDEFK CCHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHH GVIDLIKMKAINWIDTDQGMTFEYYDIPADLQERAEQLHEELVEVAAEANDFLTEKYLEE HHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALSIEEIKAGLRIRTLNNEIVLATCGSAFKNKGVQSVLDAVIDFLPSPSEVAAIKGMDE CCCCHHHHHCCCEEEEECCCEEEEECCCHHHCCCHHHHHHHHHHHCCCCCHHHEECCCCC KENEVECPATDEAPFAALAFKIATDPFVGTLTFMRVYSGVVNSGDHVYNSVKMKKERFGR CCCCCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC IVQMHANDRKEIKEVRAGDIAAAIGLKDVTTGDTLCSPEHKVILERMEFPEPVIQIAVEP EEEECCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECC RTKADQDKLTIALEKLAAEDPSFRVETNEESGQILISGMGELHLDIIVDRMRREFGVNCN CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC VGHPQVAYRETIRKTVSVEGKFIRQGEGPSHYGHVHLKLEPLKPGSGFEFVNEIVGKTIP CCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCC KEYIPAVSKGCEEQMNQGVLAGYPMLDVRVTLFDGSFHEVDSSEMAFKIAGMIGFRNGAL HHHHHHHHHHHHHHHCCCEEECCCEEEEEEEEECCCCCCCCCCHHEEEEEEEEEECCCCC QADATILEPVMNVEVTTPEDWMGDVVGDLSRRRGMIEGMDDGLGGVKIVHAKVPLAEMFG CCCHHHHHHHHCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHH YATALRSATQGRASYSMEFSEYADAPKKIANAIIEAK HHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHCCC >Mature Secondary Structure SRTTPIERYRNIGIVAHVDAGKTTTTERVLFYTGVSHKMGEVHNGAATMDWMEQEQERG CCCCCHHHHHCCCEEEEECCCCCCCCCEEEEEECCCHHHCCCCCCCCHHHHHHHHHHCC ITITSAATTTFWSGMQGQYEQHRINIIDTPGHVDFTIEVERSLRVLDGAVVVFCALSGVE EEEEECCHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEECCHHHHHHHHHEEEHHHCCCC PQSETVWRQANKYHVPRIVFVNKMDRTGADFEAVVAQIQARLGAICVPIHLNIGAEDEFK CCHHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEEEECCCCHHHH GVIDLIKMKAINWIDTDQGMTFEYYDIPADLQERAEQLHEELVEVAAEANDFLTEKYLEE HHHHHHHHHHCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GALSIEEIKAGLRIRTLNNEIVLATCGSAFKNKGVQSVLDAVIDFLPSPSEVAAIKGMDE CCCCHHHHHCCCEEEEECCCEEEEECCCHHHCCCHHHHHHHHHHHCCCCCHHHEECCCCC KENEVECPATDEAPFAALAFKIATDPFVGTLTFMRVYSGVVNSGDHVYNSVKMKKERFGR CCCCCCCCCCCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC IVQMHANDRKEIKEVRAGDIAAAIGLKDVTTGDTLCSPEHKVILERMEFPEPVIQIAVEP EEEECCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECC RTKADQDKLTIALEKLAAEDPSFRVETNEESGQILISGMGELHLDIIVDRMRREFGVNCN CCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC VGHPQVAYRETIRKTVSVEGKFIRQGEGPSHYGHVHLKLEPLKPGSGFEFVNEIVGKTIP CCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCC KEYIPAVSKGCEEQMNQGVLAGYPMLDVRVTLFDGSFHEVDSSEMAFKIAGMIGFRNGAL HHHHHHHHHHHHHHHCCCEEECCCEEEEEEEEECCCCCCCCCCHHEEEEEEEEEECCCCC QADATILEPVMNVEVTTPEDWMGDVVGDLSRRRGMIEGMDDGLGGVKIVHAKVPLAEMFG CCCHHHHHHHHCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHH YATALRSATQGRASYSMEFSEYADAPKKIANAIIEAK HHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA