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The map label for this gene is 119947030

Identifier: 119947030

GI number: 119947030

Start: 4235784

End: 4236716

Strand: Reverse

Name: 119947030

Synonym: Ping_3427

Alternate gene names: NA

Gene position: 4236716-4235784 (Counterclockwise)

Preceding gene: 119947031

Following gene: 119947029

Centisome position: 92.92

GC content: 49.3

Gene sequence:

>933_bases
ATGAAATTTTTAAAAAAACTAGCTACTGCCGCTGCAGTTAGCTCACTAGTACTTGGCGCTACTGTAGCCCAAGCAGAAGA
CTCGAAAGAACCTATTGTTATTCCTACCCATAACTGGACGAGCCAAATCACCATGGCATACGTTATCGGTGGAATTTTCG
AAAGCATTGGCGACAATGTTTCTTATGTACCCGCTGATAGCCAGGCGGTTTACGAATCGATTCGTAACGGTGACGTCACT
ATTGCTCACGAAATATGGCAGTCTACTTTTGGTAAGTCCTTCAACAACGCCTTAGACGCTGGCGGCATCATTGATGTAGG
CAAGCACGCTGCTGTTTCTCAGGAAGAGTGGTGGTATCCTGCCTATGTTGGCGAGCTATGCCCTGGCCTACCTTCCTGGA
AAGCACTAAACGATTGCTCCGAGTTGTTTGCAACAGCCGGCAGTGGTGGCAAGGGGCGCTATCTCGATGGGCCTATGGAC
TGGCATGGCCAAGAAACCCTAGACCGCATCGAAGCACTTGACATGAATTTTACCGCTAAGTTTGCCGGGTCATCTGGTGC
ACTTTGGGCAGAACTGGAGTCGGCAGCTAAAGACAACCGTGCGGTTGTGGTCTTTAACTGGTCACCTAACTTCACCGATG
CCGGTGACGGTGGCAGCTTCGTTGAATTCCCCGCGTATAGCGATGGCTGTAAGGTTTCAGCTGGTGGTGATGGCAAATGT
GGCTCTCCAGCGGCGGGTTGGTTGAAGAAGGCCGCTTATTATCAAATGCCTGCAAAATGGCCAGCAGCTTACAAAATCTT
TAACCAAATCTCCTTTACTAAAGGTGATATCGGCAACATGGCTGCATTGGTTGACATCGATGGTATGAGCCACGAAGAAG
CCGCTACTAAATGGCTGGCTGACAACGAAGCAAAATGGAAAAGCTGGCTCTAA

Upstream 100 bases:

>100_bases
GCTTTAGTGCGGAAGATAACGAAACAGAACTTCGCCTGTAATCGAAGAAAGAAAGAAAGTAATGATTACCTACTGATAAC
AATACTATCTGGAAATATAT

Downstream 100 bases:

>100_bases
GCCAAACCCTCTGACCTGAGTGCGCGGCATTCAGGTTAGGCCTGTGGTTCGTTATTCAATACAAGACCAGAGACCTTGAT
GCTTTATTTAGCCAAGGTCG

Product: substrate-binding region of ABC-type glycine betaine transport system

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKFLKKLATAAAVSSLVLGATVAQAEDSKEPIVIPTHNWTSQITMAYVIGGIFESIGDNVSYVPADSQAVYESIRNGDVT
IAHEIWQSTFGKSFNNALDAGGIIDVGKHAAVSQEEWWYPAYVGELCPGLPSWKALNDCSELFATAGSGGKGRYLDGPMD
WHGQETLDRIEALDMNFTAKFAGSSGALWAELESAAKDNRAVVVFNWSPNFTDAGDGGSFVEFPAYSDGCKVSAGGDGKC
GSPAAGWLKKAAYYQMPAKWPAAYKIFNQISFTKGDIGNMAALVDIDGMSHEEAATKWLADNEAKWKSWL

Sequences:

>Translated_310_residues
MKFLKKLATAAAVSSLVLGATVAQAEDSKEPIVIPTHNWTSQITMAYVIGGIFESIGDNVSYVPADSQAVYESIRNGDVT
IAHEIWQSTFGKSFNNALDAGGIIDVGKHAAVSQEEWWYPAYVGELCPGLPSWKALNDCSELFATAGSGGKGRYLDGPMD
WHGQETLDRIEALDMNFTAKFAGSSGALWAELESAAKDNRAVVVFNWSPNFTDAGDGGSFVEFPAYSDGCKVSAGGDGKC
GSPAAGWLKKAAYYQMPAKWPAAYKIFNQISFTKGDIGNMAALVDIDGMSHEEAATKWLADNEAKWKSWL
>Mature_310_residues
MKFLKKLATAAAVSSLVLGATVAQAEDSKEPIVIPTHNWTSQITMAYVIGGIFESIGDNVSYVPADSQAVYESIRNGDVT
IAHEIWQSTFGKSFNNALDAGGIIDVGKHAAVSQEEWWYPAYVGELCPGLPSWKALNDCSELFATAGSGGKGRYLDGPMD
WHGQETLDRIEALDMNFTAKFAGSSGALWAELESAAKDNRAVVVFNWSPNFTDAGDGGSFVEFPAYSDGCKVSAGGDGKC
GSPAAGWLKKAAYYQMPAKWPAAYKIFNQISFTKGDIGNMAALVDIDGMSHEEAATKWLADNEAKWKSWL

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33307; Mature: 33307

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLKKLATAAAVSSLVLGATVAQAEDSKEPIVIPTHNWTSQITMAYVIGGIFESIGDNV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCC
SYVPADSQAVYESIRNGDVTIAHEIWQSTFGKSFNNALDAGGIIDVGKHAAVSQEEWWYP
EECCCCHHHHHHHHCCCCEEEHHHHHHHHHCHHHHHHHCCCCCEECCCCCCCCCCCCCCH
AYVGELCPGLPSWKALNDCSELFATAGSGGKGRYLDGPMDWHGQETLDRIEALDMNFTAK
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCEEEE
FAGSSGALWAELESAAKDNRAVVVFNWSPNFTDAGDGGSFVEFPAYSDGCKVSAGGDGKC
ECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCC
GSPAAGWLKKAAYYQMPAKWPAAYKIFNQISFTKGDIGNMAALVDIDGMSHEEAATKWLA
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHC
DNEAKWKSWL
CCCCHHHCCC
>Mature Secondary Structure
MKFLKKLATAAAVSSLVLGATVAQAEDSKEPIVIPTHNWTSQITMAYVIGGIFESIGDNV
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCC
SYVPADSQAVYESIRNGDVTIAHEIWQSTFGKSFNNALDAGGIIDVGKHAAVSQEEWWYP
EECCCCHHHHHHHHCCCCEEEHHHHHHHHHCHHHHHHHCCCCCEECCCCCCCCCCCCCCH
AYVGELCPGLPSWKALNDCSELFATAGSGGKGRYLDGPMDWHGQETLDRIEALDMNFTAK
HHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCEEEE
FAGSSGALWAELESAAKDNRAVVVFNWSPNFTDAGDGGSFVEFPAYSDGCKVSAGGDGKC
ECCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCC
GSPAAGWLKKAAYYQMPAKWPAAYKIFNQISFTKGDIGNMAALVDIDGMSHEEAATKWLA
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHC
DNEAKWKSWL
CCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA