Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119947016
Identifier: 119947016
GI number: 119947016
Start: 4216108
End: 4216737
Strand: Reverse
Name: 119947016
Synonym: Ping_3413
Alternate gene names: NA
Gene position: 4216737-4216108 (Counterclockwise)
Preceding gene: 119947017
Following gene: 119947015
Centisome position: 92.48
GC content: 34.13
Gene sequence:
>630_bases ATGGATAATGCACGTGAAAATTTAGGCGACACATTATCTAATGTCGATAGAGTATTAATTGAAACCAAAGAAACAGTAAC AGAGCAGTTGGATAACTTTAGAACTACATACCAAGAAAGTTTGAATGCTTTCTTTGAAGAGCAAAATAATCTTTTAGAGA ACACATTAGGCCAACAAAGAGATGGCTTAGCTCAAGTTGTAGAGGATTGTAACCAGGTCTTTATAGAAGAGTACACTCGT AGAAAAGAGATTGGAGAAGATTTAACCAAAAATGTACAGAAAATGTCTGAAGTAAATAAGACAATTAACAAATTAGTTCA AGCAGTTCAATTATCTGAAAGTTCACATATTAATCAAATTGAACAGACTTCAAAAACCATCGGATTGCAAGTTGCAAAAC TTGAAAAAGCATACTCTGGCTCTTCTGAGTTATTTGCCGAATTGTTACAGCAAATCCCAGATGAATTAAATAAGTACTTC GAACGTGCAAATAGTAGCCATGAAGATTTTTTTAACGACATGGATAAAGCCTCAGCGAAAATTCATACTCGCTTACTACA ATCAGCAGAATATCTTATATCGGCAGAAACTCAGCGCAAAAGTATCTCGAATAATGGGAAGGTTCAATAA
Upstream 100 bases:
>100_bases GACTGCTGAGCGTGTACACACTATTATGTTATAAAGTCAAAAGTCTAATTCAGAGCAAGCTAGCATCCTTAAGCAAGTTG GAAAAACTGCGACAGAGCTG
Downstream 100 bases:
>100_bases TGAATTTAAAGCAACCATTTGTAATATATAGGGAAAATGAAAATAATACAGAAGGAACTGACTGGTTATTGATAAGTGAC TTAATGTCGGGCTTATTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MDNARENLGDTLSNVDRVLIETKETVTEQLDNFRTTYQESLNAFFEEQNNLLENTLGQQRDGLAQVVEDCNQVFIEEYTR RKEIGEDLTKNVQKMSEVNKTINKLVQAVQLSESSHINQIEQTSKTIGLQVAKLEKAYSGSSELFAELLQQIPDELNKYF ERANSSHEDFFNDMDKASAKIHTRLLQSAEYLISAETQRKSISNNGKVQ
Sequences:
>Translated_209_residues MDNARENLGDTLSNVDRVLIETKETVTEQLDNFRTTYQESLNAFFEEQNNLLENTLGQQRDGLAQVVEDCNQVFIEEYTR RKEIGEDLTKNVQKMSEVNKTINKLVQAVQLSESSHINQIEQTSKTIGLQVAKLEKAYSGSSELFAELLQQIPDELNKYF ERANSSHEDFFNDMDKASAKIHTRLLQSAEYLISAETQRKSISNNGKVQ >Mature_209_residues MDNARENLGDTLSNVDRVLIETKETVTEQLDNFRTTYQESLNAFFEEQNNLLENTLGQQRDGLAQVVEDCNQVFIEEYTR RKEIGEDLTKNVQKMSEVNKTINKLVQAVQLSESSHINQIEQTSKTIGLQVAKLEKAYSGSSELFAELLQQIPDELNKYF ERANSSHEDFFNDMDKASAKIHTRLLQSAEYLISAETQRKSISNNGKVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23901; Mature: 23901
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNARENLGDTLSNVDRVLIETKETVTEQLDNFRTTYQESLNAFFEEQNNLLENTLGQQR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGLAQVVEDCNQVFIEEYTRRKEIGEDLTKNVQKMSEVNKTINKLVQAVQLSESSHINQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQTSKTIGLQVAKLEKAYSGSSELFAELLQQIPDELNKYFERANSSHEDFFNDMDKASAK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IHTRLLQSAEYLISAETQRKSISNNGKVQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MDNARENLGDTLSNVDRVLIETKETVTEQLDNFRTTYQESLNAFFEEQNNLLENTLGQQR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGLAQVVEDCNQVFIEEYTRRKEIGEDLTKNVQKMSEVNKTINKLVQAVQLSESSHINQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQTSKTIGLQVAKLEKAYSGSSELFAELLQQIPDELNKYFERANSSHEDFFNDMDKASAK HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IHTRLLQSAEYLISAETQRKSISNNGKVQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA