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The map label for this gene is yhiR [C]

Identifier: 119946994

GI number: 119946994

Start: 4188168

End: 4189022

Strand: Reverse

Name: yhiR [C]

Synonym: Ping_3389

Alternate gene names: 119946994

Gene position: 4189022-4188168 (Counterclockwise)

Preceding gene: 119946998

Following gene: 119946992

Centisome position: 91.87

GC content: 38.48

Gene sequence:

>855_bases
ATGGAGTCATTTTTGCTCAGCTATCGACATTCTTTTCACGCAGGTAATTTTGCGGATGTGTTAAAGCACATTGTTTCCAC
ATCAATTATTGATTATATGCTCAAAAAAGAGAAAGCTTTTTGTTATCTTGATACTCATGCGGGCTGCGGAGCTTATTCAT
TTCAGTCTCCCGAAGCTTTAAAAACGAAAGAGTTTAATAATGGTATTTTTCCATTATGGGGACGCTCAGATTTGCCCGTT
CCCGTAGCGCGTTATATGGAACAAGTTGTTGAATTTAATGCCCAGAGTCAATTAAAACATTATCCTGGCTCACCCAGTAT
TGCAGTGCAGATGTTACGCGACATAGATCGCTTGTTTTTATTTGAATTACACCCTAATGAATTTATCAATATGTGCGCTA
ATTTTTCAGGGAACCGGCAAATAAAAATGGCTAAAAGTGATGGTTTACAAGGCCTGATTGCCAATATGCCGCCCAAAGCG
CGGCGCGGTTTTATTTTAATTGATCCCTCCTATGAAATTAAAACTGAATATCACCAAGTAGTTGAAACATTAATACAAGC
GCACAAGCGTTTTGCAACGGGTACCTATGCACTTTGGTATCCGGTCGTTAACCGTATGACCATTGATAAAATGGAAAAAG
CATTAAAAGCATCGGGTATTAAAAATATTCAACTTTTTGAATTGGGTCTTCAGGAAGACTCGGATCAGATGGGCATGACA
TCCAGCGGCATGATTGTTATTAATCCTCCCTGGACGTTAAAAAAAGAGATGCAGGCATCATTGCCTTTTTTAGCCAAACT
ATTAGGTTTTGATAATCAGGGCTTTTATCGCATTGAAACTTTAGTTGCAGAATAA

Upstream 100 bases:

>100_bases
GGGCGGCAATAATAACATGATAGCAGCGACATAAGCTTTTATTTTTAGCGCATTTGCAGACAATTTTATTTATACTGCAG
CGCTTATACCAATTATATTT

Downstream 100 bases:

>100_bases
TAGCTTTCTTTTTTAGCGCTGTTTTTTAAAATGTAATAATGTTTTTAGTTTAGAATAACGCCCGCCTTCTGGTTTATCCT
GGATCGCGGATTTGCCTGCT

Product: DNA (exogenous) processing protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MESFLLSYRHSFHAGNFADVLKHIVSTSIIDYMLKKEKAFCYLDTHAGCGAYSFQSPEALKTKEFNNGIFPLWGRSDLPV
PVARYMEQVVEFNAQSQLKHYPGSPSIAVQMLRDIDRLFLFELHPNEFINMCANFSGNRQIKMAKSDGLQGLIANMPPKA
RRGFILIDPSYEIKTEYHQVVETLIQAHKRFATGTYALWYPVVNRMTIDKMEKALKASGIKNIQLFELGLQEDSDQMGMT
SSGMIVINPPWTLKKEMQASLPFLAKLLGFDNQGFYRIETLVAE

Sequences:

>Translated_284_residues
MESFLLSYRHSFHAGNFADVLKHIVSTSIIDYMLKKEKAFCYLDTHAGCGAYSFQSPEALKTKEFNNGIFPLWGRSDLPV
PVARYMEQVVEFNAQSQLKHYPGSPSIAVQMLRDIDRLFLFELHPNEFINMCANFSGNRQIKMAKSDGLQGLIANMPPKA
RRGFILIDPSYEIKTEYHQVVETLIQAHKRFATGTYALWYPVVNRMTIDKMEKALKASGIKNIQLFELGLQEDSDQMGMT
SSGMIVINPPWTLKKEMQASLPFLAKLLGFDNQGFYRIETLVAE
>Mature_284_residues
MESFLLSYRHSFHAGNFADVLKHIVSTSIIDYMLKKEKAFCYLDTHAGCGAYSFQSPEALKTKEFNNGIFPLWGRSDLPV
PVARYMEQVVEFNAQSQLKHYPGSPSIAVQMLRDIDRLFLFELHPNEFINMCANFSGNRQIKMAKSDGLQGLIANMPPKA
RRGFILIDPSYEIKTEYHQVVETLIQAHKRFATGTYALWYPVVNRMTIDKMEKALKASGIKNIQLFELGLQEDSDQMGMT
SSGMIVINPPWTLKKEMQASLPFLAKLLGFDNQGFYRIETLVAE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=280, Percent_Identity=48.9285714285714, Blast_Score=276, Evalue=8e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32336; Mature: 32336

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESFLLSYRHSFHAGNFADVLKHIVSTSIIDYMLKKEKAFCYLDTHAGCGAYSFQSPEAL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHH
KTKEFNNGIFPLWGRSDLPVPVARYMEQVVEFNAQSQLKHYPGSPSIAVQMLRDIDRLFL
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHEE
FELHPNEFINMCANFSGNRQIKMAKSDGLQGLIANMPPKARRGFILIDPSYEIKTEYHQV
EEECCHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCHHHCCEEEECCCCHHHHHHHHH
VETLIQAHKRFATGTYALWYPVVNRMTIDKMEKALKASGIKNIQLFELGLQEDSDQMGMT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
SSGMIVINPPWTLKKEMQASLPFLAKLLGFDNQGFYRIETLVAE
CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure
MESFLLSYRHSFHAGNFADVLKHIVSTSIIDYMLKKEKAFCYLDTHAGCGAYSFQSPEAL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHH
KTKEFNNGIFPLWGRSDLPVPVARYMEQVVEFNAQSQLKHYPGSPSIAVQMLRDIDRLFL
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHEE
FELHPNEFINMCANFSGNRQIKMAKSDGLQGLIANMPPKARRGFILIDPSYEIKTEYHQV
EEECCHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCHHHCCEEEECCCCHHHHHHHHH
VETLIQAHKRFATGTYALWYPVVNRMTIDKMEKALKASGIKNIQLFELGLQEDSDQMGMT
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCC
SSGMIVINPPWTLKKEMQASLPFLAKLLGFDNQGFYRIETLVAE
CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]