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The map label for this gene is rpfG [H]

Identifier: 119946998

GI number: 119946998

Start: 4193325

End: 4194671

Strand: Reverse

Name: rpfG [H]

Synonym: Ping_3393

Alternate gene names: 119946998

Gene position: 4194671-4193325 (Counterclockwise)

Preceding gene: 119946999

Following gene: 119946994

Centisome position: 92.0

GC content: 46.77

Gene sequence:

>1347_bases
ATGTCCGATCAATCAATGAAAATGTCAGAGCTAATAAGTGCTCTTAGTCATGCACTAGATATGACAGAAGGACAACCACC
AGGCCACTGTGTTCGCTCTTGCTGGATAGGAATGCAACTGGGAAAGGCCAGCGGCCTGCAGGATCATCAATTATGGGAGT
TGTACTATACAATTTTGTTAAAAGATCTGGGATGCAGCAGTAATGCTGCCCGCATATGCCAACTCTATGCCACTGACGAT
CTGGATTTTAAACATGATTTCAAATCCGTGGATGGCAGCCTGACACAAGTCCTCAATTTTGTACTGCAGCATACGGGTGT
TCAAAAAGGCTTAGCTGAGCGCTTCAAACAGACGTTATCCGTTATGCGTAACGGCACTCAGTGGAGCAAAGAGTTAATGA
CAACACGCTGTGAGAGAGGTGCTGATATTGCTCGCCAGCTTCGCTTTAACGAATCGGTAGCTGACGGTATCAGAGGGCTG
GATGAGCACTGGAACGGCGGGGGACAGCCTTACGGGCTAAAAGGTAACGCCATTGCACTGTATTCCAGAATCGCGTTGTT
ATCGCAAGTGATCGATGTTTTTTTCACAGGAACAGGCCAAAATGCCTGCCTCACCGAGGTTAAAAAACGCCGCAATAGCT
GGTTTGACCCCTCTCTTGTCGACTGTTTTATTAGTATTGCTGATGATACCTTTTGGACAACTCTCGCAAGCACAAACCTT
GCTGAGCAGATCATTCAATTAGAACCAGCACAGTTTCGAGTAACGCTGGATGAAGATTACATTGATGAGATAGCGGCCGC
TTTCGGGCAAGTAGTCGACTCAAAGAGCCCTTTCACCGCGGGACACAGTAACCGTGTTGCCTTAATTACCGAATTGCTGG
CGAAAGAGCTCGGCTATTCAGAAGAGCGCCGCCGATGGTTAAAGCGCGCCGCTTTATTACATGACGTGGGCAAATTAGGC
ATCAGTAATAGCATCCTTGATAAGCCGGGGAAATTGACTGACGAAGAATTTACCACTATTAAATTGCACCCTGGGTTTAC
TGGTGAGATTCTTTCACGTATTAGCGCTTTTACAGGGCTTGCAGATGTAGCACAAGCACATCACGAGCGCATGGATGGCA
AAGGATATCCTCTTGGCCTGCAAGCCGACCAAATAACATTGGATACCCGTATTATTACAACGGCAGATATATTTGATGCT
ATTACGGCAGATCGCCCCTATAGAGGACCGATCCCCGTGCCTGATGCACTGAAAATGATGGCGGAGCATCTTGATACGCA
AATTGATCGTCGTTGCTATGAGGCGCTTGTAAAGATATCTGATGAGTTGATTTTTACTGATCACTGA

Upstream 100 bases:

>100_bases
ATACTTTTTGATATTTTATGGCGCTATTCGGGGTGGCCCTTTTGCTTTCTTCTAGACTCCATTTATCATTTATCTCATAT
CTCTCTTAGCGAGGTCGCTC

Downstream 100 bases:

>100_bases
CCACTATTTTCTGAATTGACAGCACCATGATGCATAACAGTACTTTGGGACTATAAAACCAATTCTTTTGTACAAGAGCC
GAAAAAAGCCTTGCTAAATA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MSDQSMKMSELISALSHALDMTEGQPPGHCVRSCWIGMQLGKASGLQDHQLWELYYTILLKDLGCSSNAARICQLYATDD
LDFKHDFKSVDGSLTQVLNFVLQHTGVQKGLAERFKQTLSVMRNGTQWSKELMTTRCERGADIARQLRFNESVADGIRGL
DEHWNGGGQPYGLKGNAIALYSRIALLSQVIDVFFTGTGQNACLTEVKKRRNSWFDPSLVDCFISIADDTFWTTLASTNL
AEQIIQLEPAQFRVTLDEDYIDEIAAAFGQVVDSKSPFTAGHSNRVALITELLAKELGYSEERRRWLKRAALLHDVGKLG
ISNSILDKPGKLTDEEFTTIKLHPGFTGEILSRISAFTGLADVAQAHHERMDGKGYPLGLQADQITLDTRIITTADIFDA
ITADRPYRGPIPVPDALKMMAEHLDTQIDRRCYEALVKISDELIFTDH

Sequences:

>Translated_448_residues
MSDQSMKMSELISALSHALDMTEGQPPGHCVRSCWIGMQLGKASGLQDHQLWELYYTILLKDLGCSSNAARICQLYATDD
LDFKHDFKSVDGSLTQVLNFVLQHTGVQKGLAERFKQTLSVMRNGTQWSKELMTTRCERGADIARQLRFNESVADGIRGL
DEHWNGGGQPYGLKGNAIALYSRIALLSQVIDVFFTGTGQNACLTEVKKRRNSWFDPSLVDCFISIADDTFWTTLASTNL
AEQIIQLEPAQFRVTLDEDYIDEIAAAFGQVVDSKSPFTAGHSNRVALITELLAKELGYSEERRRWLKRAALLHDVGKLG
ISNSILDKPGKLTDEEFTTIKLHPGFTGEILSRISAFTGLADVAQAHHERMDGKGYPLGLQADQITLDTRIITTADIFDA
ITADRPYRGPIPVPDALKMMAEHLDTQIDRRCYEALVKISDELIFTDH
>Mature_447_residues
SDQSMKMSELISALSHALDMTEGQPPGHCVRSCWIGMQLGKASGLQDHQLWELYYTILLKDLGCSSNAARICQLYATDDL
DFKHDFKSVDGSLTQVLNFVLQHTGVQKGLAERFKQTLSVMRNGTQWSKELMTTRCERGADIARQLRFNESVADGIRGLD
EHWNGGGQPYGLKGNAIALYSRIALLSQVIDVFFTGTGQNACLTEVKKRRNSWFDPSLVDCFISIADDTFWTTLASTNLA
EQIIQLEPAQFRVTLDEDYIDEIAAAFGQVVDSKSPFTAGHSNRVALITELLAKELGYSEERRRWLKRAALLHDVGKLGI
SNSILDKPGKLTDEEFTTIKLHPGFTGEILSRISAFTGLADVAQAHHERMDGKGYPLGLQADQITLDTRIITTADIFDAI
TADRPYRGPIPVPDALKMMAEHLDTQIDRRCYEALVKISDELIFTDH

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 49934; Mature: 49803

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDQSMKMSELISALSHALDMTEGQPPGHCVRSCWIGMQLGKASGLQDHQLWELYYTILL
CCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
KDLGCSSNAARICQLYATDDLDFKHDFKSVDGSLTQVLNFVLQHTGVQKGLAERFKQTLS
HHCCCCCCHHHHEEEHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VMRNGTQWSKELMTTRCERGADIARQLRFNESVADGIRGLDEHWNGGGQPYGLKGNAIAL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
YSRIALLSQVIDVFFTGTGQNACLTEVKKRRNSWFDPSLVDCFISIADDTFWTTLASTNL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
AEQIIQLEPAQFRVTLDEDYIDEIAAAFGQVVDSKSPFTAGHSNRVALITELLAKELGYS
HHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC
EERRRWLKRAALLHDVGKLGISNSILDKPGKLTDEEFTTIKLHPGFTGEILSRISAFTGL
HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
ADVAQAHHERMDGKGYPLGLQADQITLDTRIITTADIFDAITADRPYRGPIPVPDALKMM
HHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHH
AEHLDTQIDRRCYEALVKISDELIFTDH
HHHHHHHHHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure 
SDQSMKMSELISALSHALDMTEGQPPGHCVRSCWIGMQLGKASGLQDHQLWELYYTILL
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
KDLGCSSNAARICQLYATDDLDFKHDFKSVDGSLTQVLNFVLQHTGVQKGLAERFKQTLS
HHCCCCCCHHHHEEEHCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
VMRNGTQWSKELMTTRCERGADIARQLRFNESVADGIRGLDEHWNGGGQPYGLKGNAIAL
HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH
YSRIALLSQVIDVFFTGTGQNACLTEVKKRRNSWFDPSLVDCFISIADDTFWTTLASTNL
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
AEQIIQLEPAQFRVTLDEDYIDEIAAAFGQVVDSKSPFTAGHSNRVALITELLAKELGYS
HHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCC
EERRRWLKRAALLHDVGKLGISNSILDKPGKLTDEEFTTIKLHPGFTGEILSRISAFTGL
HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
ADVAQAHHERMDGKGYPLGLQADQITLDTRIITTADIFDAITADRPYRGPIPVPDALKMM
HHHHHHHHHHCCCCCCCCCCCCCCEEECCEEEEHHHHHHHHHCCCCCCCCCCCCHHHHHH
AEHLDTQIDRRCYEALVKISDELIFTDH
HHHHHHHHHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]