Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946989
Identifier: 119946989
GI number: 119946989
Start: 4181819
End: 4182220
Strand: Reverse
Name: 119946989
Synonym: Ping_3384
Alternate gene names: NA
Gene position: 4182220-4181819 (Counterclockwise)
Preceding gene: 119946990
Following gene: 119946987
Centisome position: 91.72
GC content: 43.28
Gene sequence:
>402_bases ATGAAGGATAAAATGCTTACTTTTCTGGCGTTAATGACGGTGTTTGTTGTTGGCTTTTCTTATGCAGCCGGGTCAGATGG CGGTCAAGGCAAGGGTAGTCAAGGTGCGGGTGGTCAAGGCATGGGCAACCTAAGCCAGATGGCCAATAAAATTAATACGC AGGTCAGGTATCGGCTTACCTATCAGGAAATGGATAAAAATACCGATGGGCAAGTGACAGAAGAAGAATACCAAGCTGTT ATTGCGCAACGTAGAGAGAAAAATCCTGGTCTGGGCGCAAATCAAAATGCCAATATGTTCACTTTTAAAGAGCTGGATTT GAATGGCGATGCGCAGCTTAGCCAGGAAGAGTTTAATCAGCATCTAGCAATTACTAATAATAGTCGCAGGTTAAAACAAT AA
Upstream 100 bases:
>100_bases GATCAGCATAGGGATGTTTTATGCCAATAGAGATGACCTTCATAATTTATTTCTTGAACTATAATGATCTCGGGTTTAAA TCATAAAAAAAGGAAATATT
Downstream 100 bases:
>100_bases AAAGCAGCACTCAAAATAACTGGGCAGTTATGTTCACTTTTGAAGAGCTGGATTTGAATGGCGATGCGCAGCTTAGCTAG GAAGAGTTTAATCAGCATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MKDKMLTFLALMTVFVVGFSYAAGSDGGQGKGSQGAGGQGMGNLSQMANKINTQVRYRLTYQEMDKNTDGQVTEEEYQAV IAQRREKNPGLGANQNANMFTFKELDLNGDAQLSQEEFNQHLAITNNSRRLKQ
Sequences:
>Translated_133_residues MKDKMLTFLALMTVFVVGFSYAAGSDGGQGKGSQGAGGQGMGNLSQMANKINTQVRYRLTYQEMDKNTDGQVTEEEYQAV IAQRREKNPGLGANQNANMFTFKELDLNGDAQLSQEEFNQHLAITNNSRRLKQ >Mature_133_residues MKDKMLTFLALMTVFVVGFSYAAGSDGGQGKGSQGAGGQGMGNLSQMANKINTQVRYRLTYQEMDKNTDGQVTEEEYQAV IAQRREKNPGLGANQNANMFTFKELDLNGDAQLSQEEFNQHLAITNNSRRLKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14704; Mature: 14704
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKMLTFLALMTVFVVGFSYAAGSDGGQGKGSQGAGGQGMGNLSQMANKINTQVRYRLT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHEEEEE YQEMDKNTDGQVTEEEYQAVIAQRREKNPGLGANQNANMFTFKELDLNGDAQLSQEEFNQ HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCC HLAITNNSRRLKQ EEEEECCCCCCCC >Mature Secondary Structure MKDKMLTFLALMTVFVVGFSYAAGSDGGQGKGSQGAGGQGMGNLSQMANKINTQVRYRLT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHEEEEE YQEMDKNTDGQVTEEEYQAVIAQRREKNPGLGANQNANMFTFKELDLNGDAQLSQEEFNQ HHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHCCC HLAITNNSRRLKQ EEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA