Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946982
Identifier: 119946982
GI number: 119946982
Start: 4170752
End: 4171000
Strand: Reverse
Name: 119946982
Synonym: Ping_3377
Alternate gene names: NA
Gene position: 4171000-4170752 (Counterclockwise)
Preceding gene: 119946983
Following gene: 119946981
Centisome position: 91.48
GC content: 40.16
Gene sequence:
>249_bases ATGGATATCACTCAGTTACTGTTTACCGCGTTGCAATTGTTAGGTCTAGGGATGGGTTTCGTCTTTCTGTTTTTAGGTTT ATTAATGGTTATTGTCAATTTGATGGCAAAATACATTCCCCAAGAACAGCCCGTTGCTGATAAAAAAAGGGCTCAGCAAA GCGCCACAGAATCTGCAATTAATCCCGCAATTATAGCCGCTATTACCACGGCTGTGCATCAATATCATAAAACTAAAACC GCACAATAG
Upstream 100 bases:
>100_bases GGGTTGATAGATAAAAAAAAATATTTTTGAATATTTATTCATTATAAGGCGTTTATTGAAATGTATCGACTAGATCAGTG TAGAAAAGGATAGAAGAATT
Downstream 100 bases:
>100_bases GAAATGAAAAATGAAGGAGCAAGTAAATATGTCTAAGCCTCTCGGCATCACTGAAGTTGTCCTACGCGATGCGCATCAAT CATTATTTGCAACACGGATG
Product: oxaloacetate decarboxylase subunit gamma
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MDITQLLFTALQLLGLGMGFVFLFLGLLMVIVNLMAKYIPQEQPVADKKRAQQSATESAINPAIIAAITTAVHQYHKTKT AQ
Sequences:
>Translated_82_residues MDITQLLFTALQLLGLGMGFVFLFLGLLMVIVNLMAKYIPQEQPVADKKRAQQSATESAINPAIIAAITTAVHQYHKTKT AQ >Mature_82_residues MDITQLLFTALQLLGLGMGFVFLFLGLLMVIVNLMAKYIPQEQPVADKKRAQQSATESAINPAIIAAITTAVHQYHKTKT AQ
Specific function: Unknown
COG id: COG3630
COG function: function code C; Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, gamma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8987; Mature: 8987
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDITQLLFTALQLLGLGMGFVFLFLGLLMVIVNLMAKYIPQEQPVADKKRAQQSATESAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NPAIIAAITTAVHQYHKTKTAQ CHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDITQLLFTALQLLGLGMGFVFLFLGLLMVIVNLMAKYIPQEQPVADKKRAQQSATESAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC NPAIIAAITTAVHQYHKTKTAQ CHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA