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The map label for this gene is frdC [H]

Identifier: 119946886

GI number: 119946886

Start: 4047403

End: 4047792

Strand: Direct

Name: frdC [H]

Synonym: Ping_3280

Alternate gene names: 119946886

Gene position: 4047403-4047792 (Clockwise)

Preceding gene: 119946885

Following gene: 119946887

Centisome position: 88.77

GC content: 40.0

Gene sequence:

>390_bases
ATGAGTAAACGTAAACCTTATGTGCGTGAATTACCAATAAATTGGTGGATGAAAAACGCTTTTTATACAAAATATATGAT
TCGCGAAGGCAGTAGTATTTTTATTACCTTATACAGCCTGATATTAACCTGGGGTGTCTTTCGTTTAAGTCAGGGTGAAG
CCGCTTTTAATGCCTGGATGGCCGCATTACACAATCCACTTTCAATTATGCTGCACCTTATCGCGTTAGCATTAGCCCTG
TATCATACTGTTACCTGGTTTTCTCTGGCGCCTAAAGCGATCGCTTTATGGATCAGAGGGAAAAGATTACCAGACAAATT
TATTATTGCGGGTCATTACGGCGCATTCGTTGCAGTGACTATTTTCTGCCTGATAATTATCACCCTGTAA

Upstream 100 bases:

>100_bases
CTTTAAATTACAGAGGTTAATAAAATGAGTAAACGTAAACCTTATGTGCGTGAACTGCCAATGGAATTAATGACAGCTTT
AAATTATGGAGGTTAATAAA

Downstream 100 bases:

>100_bases
GGAGAATGAAAATGTCTAATACAACAGAGAAAATCTATACACGTTCACATGAACCCATTTTCTGGGGGTTATTTGGTGCG
GGAGGAATGCTCACCGCGTT

Product: fumarate reductase, subunit C

Products: fumarate; reduced acceptor

Alternate protein names: Fumarate reductase 15 kDa hydrophobic protein [H]

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSKRKPYVRELPINWWMKNAFYTKYMIREGSSIFITLYSLILTWGVFRLSQGEAAFNAWMAALHNPLSIMLHLIALALAL
YHTVTWFSLAPKAIALWIRGKRLPDKFIIAGHYGAFVAVTIFCLIIITL

Sequences:

>Translated_129_residues
MSKRKPYVRELPINWWMKNAFYTKYMIREGSSIFITLYSLILTWGVFRLSQGEAAFNAWMAALHNPLSIMLHLIALALAL
YHTVTWFSLAPKAIALWIRGKRLPDKFIIAGHYGAFVAVTIFCLIIITL
>Mature_128_residues
SKRKPYVRELPINWWMKNAFYTKYMIREGSSIFITLYSLILTWGVFRLSQGEAAFNAWMAALHNPLSIMLHLIALALALY
HTVTWFSLAPKAIALWIRGKRLPDKFIIAGHYGAFVAVTIFCLIIITL

Specific function: Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane [H]

COG id: COG3029

COG function: function code C; Fumarate reductase subunit C

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frdC family [H]

Homologues:

Organism=Escherichia coli, GI1790595, Length=125, Percent_Identity=39.2, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003510
- ProDom:   PD015900 [H]

Pfam domain/function: PF02300 Fumarate_red_C [H]

EC number: 1.3.99.1

Molecular weight: Translated: 14849; Mature: 14718

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRKPYVRELPINWWMKNAFYTKYMIREGSSIFITLYSLILTWGVFRLSQGEAAFNAWM
CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AALHNPLSIMLHLIALALALYHTVTWFSLAPKAIALWIRGKRLPDKFIIAGHYGAFVAVT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCHHHHHHHH
IFCLIIITL
HHHHHHHCC
>Mature Secondary Structure 
SKRKPYVRELPINWWMKNAFYTKYMIREGSSIFITLYSLILTWGVFRLSQGEAAFNAWM
CCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AALHNPLSIMLHLIALALALYHTVTWFSLAPKAIALWIRGKRLPDKFIIAGHYGAFVAVT
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCEEEECCHHHHHHHH
IFCLIIITL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA