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The map label for this gene is ppdD [C]

Identifier: 119946861

GI number: 119946861

Start: 4017827

End: 4018249

Strand: Reverse

Name: ppdD [C]

Synonym: Ping_3255

Alternate gene names: 119946861

Gene position: 4018249-4017827 (Counterclockwise)

Preceding gene: 119946863

Following gene: 119946860

Centisome position: 88.13

GC content: 44.92

Gene sequence:

>423_bases
ATGGTTTCTTTTATGAAAAAAAATAAAGGTTTTACGCTCATTGAATTATTGATTGTGATCGCAATTATCGGGATCTTGAC
TGCTATTGTTGTACCCTCCTACCAAGAGCATATCCGCACCGCTAACCGAACTGCCGCACAACTTGCCTTAACTAAAATTG
CACAAGAGTTTGAGCGAACCAGTGCGCGTCAGGGAGGGTACCCTACAGCCTTAACGGTTCCCACAGACACTGCTGTGATC
GCAGCTGTTGATAGCCCCGATGTTTATACTATTACTCCTTCGCCTGTTCCATCAGAGCGTAGTTCATCAACATTTAAACT
TTTCGCAACGCCTATCACTGGATTTGTAAACGACGGTGATGAGTGTGGTGAGATGACTATTGATCAGGCAGGTGCTACCA
CGCCTGCGGATTGTTGGAATTAA

Upstream 100 bases:

>100_bases
ATGACTATTCTTAGCAGACTCCGGCATAATCTTATTTCGGAAGACATCTAGAATAACATCCGAAATAAGGTAATTTAAAG
CACCTCTTTAATGTAACAGA

Downstream 100 bases:

>100_bases
GATGAAATTTTCTTCAACAAAAAATTCACAGGGCATGACCTTACTGGAATTGTTAATTACTCTTGCGATCATTATTATTT
TATCCTCAATCGCCGTCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MVSFMKKNKGFTLIELLIVIAIIGILTAIVVPSYQEHIRTANRTAAQLALTKIAQEFERTSARQGGYPTALTVPTDTAVI
AAVDSPDVYTITPSPVPSERSSSTFKLFATPITGFVNDGDECGEMTIDQAGATTPADCWN

Sequences:

>Translated_140_residues
MVSFMKKNKGFTLIELLIVIAIIGILTAIVVPSYQEHIRTANRTAAQLALTKIAQEFERTSARQGGYPTALTVPTDTAVI
AAVDSPDVYTITPSPVPSERSSSTFKLFATPITGFVNDGDECGEMTIDQAGATTPADCWN
>Mature_140_residues
MVSFMKKNKGFTLIELLIVIAIIGILTAIVVPSYQEHIRTANRTAAQLALTKIAQEFERTSARQGGYPTALTVPTDTAVI
AAVDSPDVYTITPSPVPSERSSSTFKLFATPITGFVNDGDECGEMTIDQAGATTPADCWN

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14981; Mature: 14981

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSFMKKNKGFTLIELLIVIAIIGILTAIVVPSYQEHIRTANRTAAQLALTKIAQEFERT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SARQGGYPTALTVPTDTAVIAAVDSPDVYTITPSPVPSERSSSTFKLFATPITGFVNDGD
HHCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCH
ECGEMTIDQAGATTPADCWN
HHCCEEECCCCCCCCCCCCC
>Mature Secondary Structure
MVSFMKKNKGFTLIELLIVIAIIGILTAIVVPSYQEHIRTANRTAAQLALTKIAQEFERT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
SARQGGYPTALTVPTDTAVIAAVDSPDVYTITPSPVPSERSSSTFKLFATPITGFVNDGD
HHCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCH
ECGEMTIDQAGATTPADCWN
HHCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA