Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is mutL
Identifier: 119946846
GI number: 119946846
Start: 3996896
End: 3998782
Strand: Reverse
Name: mutL
Synonym: Ping_3240
Alternate gene names: 119946846
Gene position: 3998782-3996896 (Counterclockwise)
Preceding gene: 119946847
Following gene: 119946845
Centisome position: 87.7
GC content: 43.14
Gene sequence:
>1887_bases ATGCCTATTCAAATTTTAGCTGCTCGCCTGGCTAACCAAATTGCTGCGGGTGAGGTCGTTGAACGCCCGGCTTCGGTGGT TAAAGAGCTGATTGAAAACAGCTTAGATGCCGGGGCGACAAAAATTGAGATCGATATTGAAAAGGGCGGCGCAAAATGTA TCCGTGTCAAAGACAATGGTGCAGGCGTTTGTCAAGAACAGCTGACCCTGGCATTAAGCCGTCATGCAACCAGTAAAATA AGCCATTTAGACGATCTCGAAGCGATTGTCAGCTTGGGTTTTCGCGGAGAAGCCTTAGCCAGTGTCAGCTCTGTCTCGCG TCTGACATTTACTTCTAAACCCGCCGATCAGGAGCAGGCCTGGCAAGCGATCGCTGAAGGCCGGGATATGCAGGTGACTA TTCAACCTGCCGCACATCCCCAGGGAACAACGGTGGAGGTTTTGGATCTGTTTTTTAATACCCCCGCCAGGCGGCGGTTT TTAAAAACAGAAAAAACGGAATTTCAGCATATTGACGAGTTGATTCGGCGCATCGCATTAAGCCGTTTTGAAATTACTTT TGTACTGAAACATAATCATAAAATTGTTCATCAGTATCGCGCCACACAAACACAAAGTCAGCAGGAAAAACGTCTTGCTT CTATCTGCAGTGAAAGTTTTGTCAGCAGCGCCTTATATTTTCAAAATAGCGATAATGCGTTAAAAATATCCGGTTGGGTT TCAGATAAGCTCTCCGCACGGTCATCAAACGATGTGCAGTACTGCTATATTAATGGCAGAGTGATCCGCGATAAATTAAT TAACCATGCGATCAAGCAGGTTTATGCTTACTCCTTACCTCAGGGGAAATTCCCCGCTTATGTTATCTATATTGAATGTG ATCCGGATCAAGTGGATGTAAATGTGCACCCCTCAAAACATGAGGTACGTTTTCATCAGGCGCGTTGGGTACATGATTTT ATCGTCAGCACCTTAACGGTGACACTAAATGAATCCCCCTTGTCGGCATCAGAACCACAATCACAACCAAAACCAAGTGA ACACGCTTATTTACCCGCCAACCGCGGGGAGGAAAAAACTGATTCTCAGTATGAGCCAAAAGAAAAAAATAAAAGTGCCG GGCGGGTTAATGAGCAAACAGCAGCGCCATCTTCAGGTTATGCTAAGCGCGAAACAAACCCACAACTGGATCAGGCTAAA ATGGCGGCCTATTGCGATTTTGTCGCGGAAGCTCACTTACCTTTCTCGGCAGACGAACAACAATCATCTACTTTATCTGA TCTGACTTTTGCGACTGTCGTGTGTTTGATCGACAGGCAATATTTATTAATTAAGCTCAATGCAAAGCAGCAGCTGCTCA ATATTGACTCGCCTTTTTTAGTGTTGTCCTTGGAAAACGTTGATTTAATGATTAAGCAAATGGAATTATTTGCTGCCTGG TCCGATGGAGAAGTAATAGCACAACCTTTGTTATTACCCGTGCGTGTGGAGCTTGATGCGCTTTTATTGAAAACTAGCGA AGACTTTAATGAGTTATTTATGCGCTTAGGTTTTGTTTTTAAAATACAGGGCAGCAAGCTGATTATTAGTAAAGTGCCCG CGCTACTCAGGCAGGCACCGGTTGCGAAAATTATACCTGAGTTATTAACCTTTTTAAGTCAAACAGATAACAATATGGAT GCACAACAGGTTAATCTCTTTTGTGTCTTTTTAGTCAACACATTAAAACAGCAGCAAGCAGAAAATATTAACTGGACTGA GCAAAGTGCCAAAGCGCTTTTTGACTTATTACTTTCGTTGTTCTCGGAAAAGCTTAGTGACTGGCAGAAACAATTATTTA GAGTGCCCGATTTATCATTATTAGTACAAGGTTTTTCACATGAATAA
Upstream 100 bases:
>100_bases GATGTTATTAAAGAATTTAATAAACTCAGTTCAACTTTGCTTAGGGTTGGTCAAGTTTTAACCATTCCTGTTAGTTAATC GATTTCGGATACCCGTTTTT
Downstream 100 bases:
>100_bases CTATCCGACCGCCCTGTTTTTAATGGGGCCTACGGCTTCTGGAAAAACCGATTTAGCCATAAAATTAGCCTTGCAATGTG ACTGTGAAATTATCAGTGTT
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 628; Mature: 627
Protein sequence:
>628_residues MPIQILAARLANQIAAGEVVERPASVVKELIENSLDAGATKIEIDIEKGGAKCIRVKDNGAGVCQEQLTLALSRHATSKI SHLDDLEAIVSLGFRGEALASVSSVSRLTFTSKPADQEQAWQAIAEGRDMQVTIQPAAHPQGTTVEVLDLFFNTPARRRF LKTEKTEFQHIDELIRRIALSRFEITFVLKHNHKIVHQYRATQTQSQQEKRLASICSESFVSSALYFQNSDNALKISGWV SDKLSARSSNDVQYCYINGRVIRDKLINHAIKQVYAYSLPQGKFPAYVIYIECDPDQVDVNVHPSKHEVRFHQARWVHDF IVSTLTVTLNESPLSASEPQSQPKPSEHAYLPANRGEEKTDSQYEPKEKNKSAGRVNEQTAAPSSGYAKRETNPQLDQAK MAAYCDFVAEAHLPFSADEQQSSTLSDLTFATVVCLIDRQYLLIKLNAKQQLLNIDSPFLVLSLENVDLMIKQMELFAAW SDGEVIAQPLLLPVRVELDALLLKTSEDFNELFMRLGFVFKIQGSKLIISKVPALLRQAPVAKIIPELLTFLSQTDNNMD AQQVNLFCVFLVNTLKQQQAENINWTEQSAKALFDLLLSLFSEKLSDWQKQLFRVPDLSLLVQGFSHE
Sequences:
>Translated_628_residues MPIQILAARLANQIAAGEVVERPASVVKELIENSLDAGATKIEIDIEKGGAKCIRVKDNGAGVCQEQLTLALSRHATSKI SHLDDLEAIVSLGFRGEALASVSSVSRLTFTSKPADQEQAWQAIAEGRDMQVTIQPAAHPQGTTVEVLDLFFNTPARRRF LKTEKTEFQHIDELIRRIALSRFEITFVLKHNHKIVHQYRATQTQSQQEKRLASICSESFVSSALYFQNSDNALKISGWV SDKLSARSSNDVQYCYINGRVIRDKLINHAIKQVYAYSLPQGKFPAYVIYIECDPDQVDVNVHPSKHEVRFHQARWVHDF IVSTLTVTLNESPLSASEPQSQPKPSEHAYLPANRGEEKTDSQYEPKEKNKSAGRVNEQTAAPSSGYAKRETNPQLDQAK MAAYCDFVAEAHLPFSADEQQSSTLSDLTFATVVCLIDRQYLLIKLNAKQQLLNIDSPFLVLSLENVDLMIKQMELFAAW SDGEVIAQPLLLPVRVELDALLLKTSEDFNELFMRLGFVFKIQGSKLIISKVPALLRQAPVAKIIPELLTFLSQTDNNMD AQQVNLFCVFLVNTLKQQQAENINWTEQSAKALFDLLLSLFSEKLSDWQKQLFRVPDLSLLVQGFSHE >Mature_627_residues PIQILAARLANQIAAGEVVERPASVVKELIENSLDAGATKIEIDIEKGGAKCIRVKDNGAGVCQEQLTLALSRHATSKIS HLDDLEAIVSLGFRGEALASVSSVSRLTFTSKPADQEQAWQAIAEGRDMQVTIQPAAHPQGTTVEVLDLFFNTPARRRFL KTEKTEFQHIDELIRRIALSRFEITFVLKHNHKIVHQYRATQTQSQQEKRLASICSESFVSSALYFQNSDNALKISGWVS DKLSARSSNDVQYCYINGRVIRDKLINHAIKQVYAYSLPQGKFPAYVIYIECDPDQVDVNVHPSKHEVRFHQARWVHDFI VSTLTVTLNESPLSASEPQSQPKPSEHAYLPANRGEEKTDSQYEPKEKNKSAGRVNEQTAAPSSGYAKRETNPQLDQAKM AAYCDFVAEAHLPFSADEQQSSTLSDLTFATVVCLIDRQYLLIKLNAKQQLLNIDSPFLVLSLENVDLMIKQMELFAAWS DGEVIAQPLLLPVRVELDALLLKTSEDFNELFMRLGFVFKIQGSKLIISKVPALLRQAPVAKIIPELLTFLSQTDNNMDA QQVNLFCVFLVNTLKQQQAENINWTEQSAKALFDLLLSLFSEKLSDWQKQLFRVPDLSLLVQGFSHE
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family
Homologues:
Organism=Homo sapiens, GI4557757, Length=315, Percent_Identity=36.5079365079365, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI4505911, Length=317, Percent_Identity=28.7066246056782, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI189458898, Length=317, Percent_Identity=28.7066246056782, Blast_Score=137, Evalue=4e-32, Organism=Homo sapiens, GI189458896, Length=310, Percent_Identity=28.3870967741935, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI4505913, Length=341, Percent_Identity=28.7390029325513, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI310128478, Length=341, Percent_Identity=28.7390029325513, Blast_Score=123, Evalue=6e-28, Organism=Homo sapiens, GI263191589, Length=221, Percent_Identity=32.579185520362, Blast_Score=112, Evalue=8e-25, Organism=Homo sapiens, GI310128480, Length=294, Percent_Identity=26.530612244898, Blast_Score=87, Evalue=6e-17, Organism=Homo sapiens, GI91992162, Length=337, Percent_Identity=23.4421364985163, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI91992160, Length=337, Percent_Identity=23.4421364985163, Blast_Score=77, Evalue=6e-14, Organism=Escherichia coli, GI1790612, Length=567, Percent_Identity=48.1481481481481, Blast_Score=499, Evalue=1e-142, Organism=Caenorhabditis elegans, GI71991825, Length=320, Percent_Identity=33.75, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI17562796, Length=346, Percent_Identity=27.7456647398844, Blast_Score=126, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6323819, Length=357, Percent_Identity=34.453781512605, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6324247, Length=375, Percent_Identity=27.7333333333333, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6325093, Length=348, Percent_Identity=26.7241379310345, Blast_Score=93, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6323063, Length=184, Percent_Identity=32.0652173913043, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI17136968, Length=313, Percent_Identity=33.8658146964856, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI17136970, Length=181, Percent_Identity=35.9116022099448, Blast_Score=101, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MUTL_PSYIN (A1SZL2)
Other databases:
- EMBL: CP000510 - RefSeq: YP_944526.1 - ProteinModelPortal: A1SZL2 - STRING: A1SZL2 - GeneID: 4626338 - GenomeReviews: CP000510_GR - KEGG: pin:Ping_3240 - eggNOG: COG0323 - HOGENOM: HBG520262 - PhylomeDB: A1SZL2 - BioCyc: PING357804:PING_3240-MONOMER - HAMAP: MF_00149 - InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.565.10 - Gene3D: G3DSA:3.30.230.10 - PANTHER: PTHR10073 - SMART: SM00387 - SMART: SM00853 - TIGRFAMs: TIGR00585
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 70469; Mature: 70338
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIQILAARLANQIAAGEVVERPASVVKELIENSLDAGATKIEIDIEKGGAKCIRVKDNG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCC AGVCQEQLTLALSRHATSKISHLDDLEAIVSLGFRGEALASVSSVSRLTFTSKPADQEQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCHHHH WQAIAEGRDMQVTIQPAAHPQGTTVEVLDLFFNTPARRRFLKTEKTEFQHIDELIRRIAL HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SRFEITFVLKHNHKIVHQYRATQTQSQQEKRLASICSESFVSSALYFQNSDNALKISGWV HHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCC SDKLSARSSNDVQYCYINGRVIRDKLINHAIKQVYAYSLPQGKFPAYVIYIECDPDQVDV CHHHCCCCCCCEEEEEECCEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEE NVHPSKHEVRFHQARWVHDFIVSTLTVTLNESPLSASEPQSQPKPSEHAYLPANRGEEKT EECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCC DSQYEPKEKNKSAGRVNEQTAAPSSGYAKRETNPQLDQAKMAAYCDFVAEAHLPFSADEQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH QSSTLSDLTFATVVCLIDRQYLLIKLNAKQQLLNIDSPFLVLSLENVDLMIKQMELFAAW HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCEEEEEECCHHHHHHHHHHHEEC SDGEVIAQPLLLPVRVELDALLLKTSEDFNELFMRLGFVFKIQGSKLIISKVPALLRQAP CCCCHHHCCCEEEEEECHHHHEEECCCCHHHHHHHCCEEEEECCCEEHHHHHHHHHHHCC VAKIIPELLTFLSQTDNNMDAQQVNLFCVFLVNTLKQQQAENINWTEQSAKALFDLLLSL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FSEKLSDWQKQLFRVPDLSLLVQGFSHE HHHHHHHHHHHHHCCCCHHHHHHCCCCC >Mature Secondary Structure PIQILAARLANQIAAGEVVERPASVVKELIENSLDAGATKIEIDIEKGGAKCIRVKDNG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEECCC AGVCQEQLTLALSRHATSKISHLDDLEAIVSLGFRGEALASVSSVSRLTFTSKPADQEQA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCCCCCHHHH WQAIAEGRDMQVTIQPAAHPQGTTVEVLDLFFNTPARRRFLKTEKTEFQHIDELIRRIAL HHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SRFEITFVLKHNHKIVHQYRATQTQSQQEKRLASICSESFVSSALYFQNSDNALKISGWV HHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCC SDKLSARSSNDVQYCYINGRVIRDKLINHAIKQVYAYSLPQGKFPAYVIYIECDPDQVDV CHHHCCCCCCCEEEEEECCEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEE NVHPSKHEVRFHQARWVHDFIVSTLTVTLNESPLSASEPQSQPKPSEHAYLPANRGEEKT EECCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCC DSQYEPKEKNKSAGRVNEQTAAPSSGYAKRETNPQLDQAKMAAYCDFVAEAHLPFSADEQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH QSSTLSDLTFATVVCLIDRQYLLIKLNAKQQLLNIDSPFLVLSLENVDLMIKQMELFAAW HHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCCCEEEEEECCHHHHHHHHHHHEEC SDGEVIAQPLLLPVRVELDALLLKTSEDFNELFMRLGFVFKIQGSKLIISKVPALLRQAP CCCCHHHCCCEEEEEECHHHHEEECCCCHHHHHHHCCEEEEECCCEEHHHHHHHHHHHCC VAKIIPELLTFLSQTDNNMDAQQVNLFCVFLVNTLKQQQAENINWTEQSAKALFDLLLSL HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH FSEKLSDWQKQLFRVPDLSLLVQGFSHE HHHHHHHHHHHHHCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA