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The map label for this gene is yibN [H]

Identifier: 119946816

GI number: 119946816

Start: 3964673

End: 3965101

Strand: Reverse

Name: yibN [H]

Synonym: Ping_3210

Alternate gene names: 119946816

Gene position: 3965101-3964673 (Counterclockwise)

Preceding gene: 119946825

Following gene: 119946815

Centisome position: 86.96

GC content: 39.63

Gene sequence:

>429_bases
ATGCAACAATATATAGATTTTTTTTTCAACCAGCCAGTGTTATCAATTGCATGGATTGCAATTGCAGTGATGCTGGTACA
AAGCCTTGTTAAGCATAAAATTTCGGGTGTAAAAAGCATTACCGCGCAGGATGCGATCATGATGATAAATAAGCAAAATG
CCATTATTGTTGATGTTCGCTCCGTTGAAGAATACAAAAAAGGCCATATTCTCAACGCAAAAAACATACCTGTGTCACAA
ATTGACAAAGGAAGTTTTGCAGAGATTGAAAAGCATAAAGAGGCCCCCATTATATTGGTCTGTGCTTCTGGTGATCGCTC
ATCGGGTGCCGCAGGTAAATTGACAAAAGCTGGTTTTACACAAGTAACCAACTTACTTTCAGGAATGAATGGTTGGTCTG
GCGCTAGCTTACCCACAACGAAGAAGTAA

Upstream 100 bases:

>100_bases
TATTCATTTTATAAGTCAATGCATAATACTTTGGCTGATTTTATTAATTTCACAAGGTATAATCGCGGCCAATTACCCTT
ACTGAAGATGATCATAACTT

Downstream 100 bases:

>100_bases
ATTATGGCAACAATAGTTATTTATACAACATCTTGGTGTCCATTTTGCACTCGTGCTAAAAAATTGTTGGACCATAAAAA
CGTTACTTACACTGAAGTTG

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MQQYIDFFFNQPVLSIAWIAIAVMLVQSLVKHKISGVKSITAQDAIMMINKQNAIIVDVRSVEEYKKGHILNAKNIPVSQ
IDKGSFAEIEKHKEAPIILVCASGDRSSGAAGKLTKAGFTQVTNLLSGMNGWSGASLPTTKK

Sequences:

>Translated_142_residues
MQQYIDFFFNQPVLSIAWIAIAVMLVQSLVKHKISGVKSITAQDAIMMINKQNAIIVDVRSVEEYKKGHILNAKNIPVSQ
IDKGSFAEIEKHKEAPIILVCASGDRSSGAAGKLTKAGFTQVTNLLSGMNGWSGASLPTTKK
>Mature_142_residues
MQQYIDFFFNQPVLSIAWIAIAVMLVQSLVKHKISGVKSITAQDAIMMINKQNAIIVDVRSVEEYKKGHILNAKNIPVSQ
IDKGSFAEIEKHKEAPIILVCASGDRSSGAAGKLTKAGFTQVTNLLSGMNGWSGASLPTTKK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=141, Percent_Identity=41.8439716312057, Blast_Score=119, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15387; Mature: 15387

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQYIDFFFNQPVLSIAWIAIAVMLVQSLVKHKISGVKSITAQDAIMMINKQNAIIVDVR
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEHH
SVEEYKKGHILNAKNIPVSQIDKGSFAEIEKHKEAPIILVCASGDRSSGAAGKLTKAGFT
HHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHH
QVTNLLSGMNGWSGASLPTTKK
HHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQQYIDFFFNQPVLSIAWIAIAVMLVQSLVKHKISGVKSITAQDAIMMINKQNAIIVDVR
CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCEEEEEHH
SVEEYKKGHILNAKNIPVSQIDKGSFAEIEKHKEAPIILVCASGDRSSGAAGKLTKAGFT
HHHHHHCCCCCCCCCCCHHHCCCCCHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHH
QVTNLLSGMNGWSGASLPTTKK
HHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]