Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946735
Identifier: 119946735
GI number: 119946735
Start: 3838916
End: 3840268
Strand: Reverse
Name: 119946735
Synonym: Ping_3119
Alternate gene names: NA
Gene position: 3840268-3838916 (Counterclockwise)
Preceding gene: 119946738
Following gene: 119946734
Centisome position: 84.22
GC content: 42.72
Gene sequence:
>1353_bases ATGAACTCTATTAACCAAAATAAAGGATTTGTGGTGTTAACCACGACGGTTTTGTTAAGTATCGCCAGCATTGCATTTAC AGCACAGATGGCATCGACTCAACTACTTGACAATAAAATTGTGGCTAATGATTACCGTAATAATGAGGCCTTTGTTAATG CGGAATCGGGTATCAATTTACTGCTGAGTAGACTTGATGATCCAATCCGCGGGCCTGAGATTTTCACTCGTGCAACTTAT GATGACAGTACAACTTATACTGACAGCTCAACAGATAACCCCTATAGAGTGACACTCACTTGGCTTAATGCCAATACGCT GGAATTGGTCTCAACGGGTAAATCTATGGATGGCAGTGCACAGCGAATCATTTCTCTGCAAATTACTCCTGAAATGAGTT TTAATCTTCCCCAAGCAGCTGTTTCATTCAATGGAAGAGTGAATCTGGATGAATTGGCTATGGTTAATAATGGTTGTGAG GGGTTTAGTGCCGCGGATTGTGAATCTCCGGGTAATTTTGCAGATTATCAACTGGTCAGTCATCCTGAAAATCCAACCGC AATGGGTTTATGCCCCGGATCGGTTGATAACAAGGCTTTTTATGAACCGATAACGGCGGATAACTCGCTGGAAGTAGGCT CGTCTGATACTCACGGTAATACTATTAAATGGCCAAATAATGTACCTGCCAATTCTTATTTTTTTGAAACACTCGCAGGT GGTTCAGAGCCCACTTCACTGTTTGAAAGCACCTTTGGAGTGAGTAAAGCTGCGGGTGTCACTGCATTAAACGATGCTGC TGATAAAACGGCTGCTGGTGATGTTGTGAATACTAAAGTGGCGAAAGTTGTTGGCGGGGAAGGCTGCTCGAGCCGCTTAC AGGCCTTAGGAGACGAGATAAATGCTATTTATATCACTGGAGATTGTGAGATAGACCCAAGTGATACGGAAAATAAATAT TTTTATATCGGTACAGTGAATGATCCCAAAATGGTCTTTATAGAAGGTGGAACCTTTACCGGTCCATCCGGCACTGACAT TTCAGCCAACAGAGTCGCATCTGTTAGTGGCATGCTGTATTTCCTTCCTGGCAAGCACGATGTTTTGGATGCCGATGGGA ATGTGGTGGCTACCGAGGAAGATTCAATTGTTGATATGCAGGGAGTAAGGGTTAACGGCACAGTGTTAAGTGAATACAGT TGTTCATATGATCAAGCCGAGCATAGGACTAAGCAACCATTTTCTGTACGTTATGATAAAGCAGTACTTGATACATTATA CGGAAATATAGATCGGAACCGCCTTACCTATAACGGTTATAGTATTGTGCAGGGGTCATGGAGGGATTTTTAA
Upstream 100 bases:
>100_bases TAATGAGGCTTTTTACCTTAGTCCTCCGGATTGGCCTATTTCATATTGATAAGGTATTTCAATTTTGATCTATCTTAAAT GACTTTTCTGGAGTCTAGTA
Downstream 100 bases:
>100_bases TGTTTAAAAAAACAGCTCAAAATGGTTTTTTACTGGTTGAAATATTAGTGTCATTATTAATAGTCAGTTTAACCGCTGTA AATATAACCGGTTTACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MNSINQNKGFVVLTTTVLLSIASIAFTAQMASTQLLDNKIVANDYRNNEAFVNAESGINLLLSRLDDPIRGPEIFTRATY DDSTTYTDSSTDNPYRVTLTWLNANTLELVSTGKSMDGSAQRIISLQITPEMSFNLPQAAVSFNGRVNLDELAMVNNGCE GFSAADCESPGNFADYQLVSHPENPTAMGLCPGSVDNKAFYEPITADNSLEVGSSDTHGNTIKWPNNVPANSYFFETLAG GSEPTSLFESTFGVSKAAGVTALNDAADKTAAGDVVNTKVAKVVGGEGCSSRLQALGDEINAIYITGDCEIDPSDTENKY FYIGTVNDPKMVFIEGGTFTGPSGTDISANRVASVSGMLYFLPGKHDVLDADGNVVATEEDSIVDMQGVRVNGTVLSEYS CSYDQAEHRTKQPFSVRYDKAVLDTLYGNIDRNRLTYNGYSIVQGSWRDF
Sequences:
>Translated_450_residues MNSINQNKGFVVLTTTVLLSIASIAFTAQMASTQLLDNKIVANDYRNNEAFVNAESGINLLLSRLDDPIRGPEIFTRATY DDSTTYTDSSTDNPYRVTLTWLNANTLELVSTGKSMDGSAQRIISLQITPEMSFNLPQAAVSFNGRVNLDELAMVNNGCE GFSAADCESPGNFADYQLVSHPENPTAMGLCPGSVDNKAFYEPITADNSLEVGSSDTHGNTIKWPNNVPANSYFFETLAG GSEPTSLFESTFGVSKAAGVTALNDAADKTAAGDVVNTKVAKVVGGEGCSSRLQALGDEINAIYITGDCEIDPSDTENKY FYIGTVNDPKMVFIEGGTFTGPSGTDISANRVASVSGMLYFLPGKHDVLDADGNVVATEEDSIVDMQGVRVNGTVLSEYS CSYDQAEHRTKQPFSVRYDKAVLDTLYGNIDRNRLTYNGYSIVQGSWRDF >Mature_450_residues MNSINQNKGFVVLTTTVLLSIASIAFTAQMASTQLLDNKIVANDYRNNEAFVNAESGINLLLSRLDDPIRGPEIFTRATY DDSTTYTDSSTDNPYRVTLTWLNANTLELVSTGKSMDGSAQRIISLQITPEMSFNLPQAAVSFNGRVNLDELAMVNNGCE GFSAADCESPGNFADYQLVSHPENPTAMGLCPGSVDNKAFYEPITADNSLEVGSSDTHGNTIKWPNNVPANSYFFETLAG GSEPTSLFESTFGVSKAAGVTALNDAADKTAAGDVVNTKVAKVVGGEGCSSRLQALGDEINAIYITGDCEIDPSDTENKY FYIGTVNDPKMVFIEGGTFTGPSGTDISANRVASVSGMLYFLPGKHDVLDADGNVVATEEDSIVDMQGVRVNGTVLSEYS CSYDQAEHRTKQPFSVRYDKAVLDTLYGNIDRNRLTYNGYSIVQGSWRDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48484; Mature: 48484
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSINQNKGFVVLTTTVLLSIASIAFTAQMASTQLLDNKIVANDYRNNEAFVNAESGINL CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCHHH LLSRLDDPIRGPEIFTRATYDDSTTYTDSSTDNPYRVTLTWLNANTLELVSTGKSMDGSA HHHHCCCCCCCCCEEEEEECCCCCEECCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCC QRIISLQITPEMSFNLPQAAVSFNGRVNLDELAMVNNGCEGFSAADCESPGNFADYQLVS EEEEEEEECCCCCCCCCHHHEECCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEE HPENPTAMGLCPGSVDNKAFYEPITADNSLEVGSSDTHGNTIKWPNNVPANSYFFETLAG CCCCCCEEEECCCCCCCCEEECCCCCCCCEECCCCCCCCCEEECCCCCCCCCEEHHHHCC GSEPTSLFESTFGVSKAAGVTALNDAADKTAAGDVVNTKVAKVVGGEGCSSRLQALGDEI CCCHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCHHHHHHHEEECCCCHHHHHHHCCCCC NAIYITGDCEIDPSDTENKYFYIGTVNDPKMVFIEGGTFTGPSGTDISANRVASVSGMLY CEEEEEECCEECCCCCCCEEEEEEECCCCEEEEEECCEECCCCCCCCCCCCEEEECCEEE FLPGKHDVLDADGNVVATEEDSIVDMQGVRVNGTVLSEYSCSYDQAEHRTKQPFSVRYDK EECCCCEEECCCCCEEEECCCCEEEECCEEECCEEEECCCCCCHHHHHHCCCCCEEEHHH AVLDTLYGNIDRNRLTYNGYSIVQGSWRDF HHHHHHHCCCCCCEEEECCEEEECCCCCCC >Mature Secondary Structure MNSINQNKGFVVLTTTVLLSIASIAFTAQMASTQLLDNKIVANDYRNNEAFVNAESGINL CCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEECCCCHHH LLSRLDDPIRGPEIFTRATYDDSTTYTDSSTDNPYRVTLTWLNANTLELVSTGKSMDGSA HHHHCCCCCCCCCEEEEEECCCCCEECCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCC QRIISLQITPEMSFNLPQAAVSFNGRVNLDELAMVNNGCEGFSAADCESPGNFADYQLVS EEEEEEEECCCCCCCCCHHHEECCCCCCHHHHHEECCCCCCCCCCCCCCCCCCCCEEEEE HPENPTAMGLCPGSVDNKAFYEPITADNSLEVGSSDTHGNTIKWPNNVPANSYFFETLAG CCCCCCEEEECCCCCCCCEEECCCCCCCCEECCCCCCCCCEEECCCCCCCCCEEHHHHCC GSEPTSLFESTFGVSKAAGVTALNDAADKTAAGDVVNTKVAKVVGGEGCSSRLQALGDEI CCCHHHHHHHHCCCCHHCCCEEECCCCCCCCCCCHHHHHHHEEECCCCHHHHHHHCCCCC NAIYITGDCEIDPSDTENKYFYIGTVNDPKMVFIEGGTFTGPSGTDISANRVASVSGMLY CEEEEEECCEECCCCCCCEEEEEEECCCCEEEEEECCEECCCCCCCCCCCCEEEECCEEE FLPGKHDVLDADGNVVATEEDSIVDMQGVRVNGTVLSEYSCSYDQAEHRTKQPFSVRYDK EECCCCEEECCCCCEEEECCCCEEEECCEEECCEEEECCCCCCHHHHHHCCCCCEEEHHH AVLDTLYGNIDRNRLTYNGYSIVQGSWRDF HHHHHHHCCCCCCEEEECCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA