Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946738
Identifier: 119946738
GI number: 119946738
Start: 3843455
End: 3844063
Strand: Reverse
Name: 119946738
Synonym: Ping_3122
Alternate gene names: NA
Gene position: 3844063-3843455 (Counterclockwise)
Preceding gene: 119946739
Following gene: 119946735
Centisome position: 84.31
GC content: 41.87
Gene sequence:
>609_bases ATGAGAAAAACAGTTTTACTGGTTGGTTTTTTGGTTGCCTGGTTAAGCCTTAGCGGGTGTACTGCCTTATCCCCAGAAGC CAAATTACAACAGGCGGAAATACAGAAAGAAGTGCAGCGTATCACGCTGGTCAGTAGCGCGAACCCTAAAAATGTATTAC CTGCCTTTACGGATTTTACTTGGAATAATGAATATAACCTGGTTTTATCAGCTGTTGATAGTAAAAGAGAACAACAGCTT AAGGTCTATATTCGCAGCGAAATAATTCGTTATTTAGCGATTAAAGGTTATGTCTATCAACCTGATCCTGTGCAGGCTGA TGTTGTGATTGGTTTTTTATTTGCACTGGAAGATCAGCGCGCCGATGGGGCGATTCAACAAAATTTTGGTTTATTACCCC GATTGCACGGCGCCAAAGTCAATTTTCCCGGTTATAAACAGGGAACAGTGATGCTTAATGTGCTCAGTGCGGATTTGAAA AAGGTCTACTGGCGCTCTGCTATGCAAGGTATTAAGGATTTGGAAAAAATGCAGGATGATCCAACGGGCAAGAAAATACA ATCTATTTTGGGCATTATGATGGGTAATTTTCCACCGGCAGGCCACTAG
Upstream 100 bases:
>100_bases GCCATCTGAGTGAAAACGGCCACTTGCCGGGAGCTGGCATTGAAGTGATGGAAAAAGCGGCGGCATTTGTTGTTGAGGGT TAATTTTTAGTGGAGATAAT
Downstream 100 bases:
>100_bases TTCTTTTGTTTAGTATTAAAAGCCCTAATAGTAAACCATGGGGCTTTTAATTATCACAAGCCATATTCAATCATCACCAT CAACATTCAATCAAATATTG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MRKTVLLVGFLVAWLSLSGCTALSPEAKLQQAEIQKEVQRITLVSSANPKNVLPAFTDFTWNNEYNLVLSAVDSKREQQL KVYIRSEIIRYLAIKGYVYQPDPVQADVVIGFLFALEDQRADGAIQQNFGLLPRLHGAKVNFPGYKQGTVMLNVLSADLK KVYWRSAMQGIKDLEKMQDDPTGKKIQSILGIMMGNFPPAGH
Sequences:
>Translated_202_residues MRKTVLLVGFLVAWLSLSGCTALSPEAKLQQAEIQKEVQRITLVSSANPKNVLPAFTDFTWNNEYNLVLSAVDSKREQQL KVYIRSEIIRYLAIKGYVYQPDPVQADVVIGFLFALEDQRADGAIQQNFGLLPRLHGAKVNFPGYKQGTVMLNVLSADLK KVYWRSAMQGIKDLEKMQDDPTGKKIQSILGIMMGNFPPAGH >Mature_202_residues MRKTVLLVGFLVAWLSLSGCTALSPEAKLQQAEIQKEVQRITLVSSANPKNVLPAFTDFTWNNEYNLVLSAVDSKREQQL KVYIRSEIIRYLAIKGYVYQPDPVQADVVIGFLFALEDQRADGAIQQNFGLLPRLHGAKVNFPGYKQGTVMLNVLSADLK KVYWRSAMQGIKDLEKMQDDPTGKKIQSILGIMMGNFPPAGH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22585; Mature: 22585
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKTVLLVGFLVAWLSLSGCTALSPEAKLQQAEIQKEVQRITLVSSANPKNVLPAFTDFT CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE WNNEYNLVLSAVDSKREQQLKVYIRSEIIRYLAIKGYVYQPDPVQADVVIGFLFALEDQR ECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHCCC ADGAIQQNFGLLPRLHGAKVNFPGYKQGTVMLNVLSADLKKVYWRSAMQGIKDLEKMQDD CCCCHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTGKKIQSILGIMMGNFPPAGH CCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRKTVLLVGFLVAWLSLSGCTALSPEAKLQQAEIQKEVQRITLVSSANPKNVLPAFTDFT CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCE WNNEYNLVLSAVDSKREQQLKVYIRSEIIRYLAIKGYVYQPDPVQADVVIGFLFALEDQR ECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHCCC ADGAIQQNFGLLPRLHGAKVNFPGYKQGTVMLNVLSADLKKVYWRSAMQGIKDLEKMQDD CCCCHHHCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PTGKKIQSILGIMMGNFPPAGH CCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA