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The map label for this gene is ycgF [C]

Identifier: 119946711

GI number: 119946711

Start: 3801107

End: 3801580

Strand: Reverse

Name: ycgF [C]

Synonym: Ping_3094

Alternate gene names: 119946711

Gene position: 3801580-3801107 (Counterclockwise)

Preceding gene: 119946712

Following gene: 119946710

Centisome position: 83.38

GC content: 39.03

Gene sequence:

>474_bases
ATGAATACACTGTTAGAGCGAATAAAAAATCAGAAGGCAATAATGACTGAACTCATACACTTGATATACGCAAGCAAAGC
TTCTATCGACTTTTCTAAAGACGAAATAGTGGTTTTGCTGGAAAAAGCTAGAAATACGAACAAATTTCTTGATGTCACCG
GAATGCTACTTTCTGATAGCGGTGGTTTTTTACAGGTTCTAGAAGGCGAAGAAAAAACTGTAAACCAGTTATTTTCGGTG
ATAAGCGGAGACGGTCGACATAACAACGTTGTAAAGATAATATCTGAAGCGATACCAGAGCGCCAATTTGATGATTGGAC
TATGGGCGAGGCATCTATATCGAGACAAGAGTTGGTGGAAATTGAAGGAATGAACGATTTTTTTACTGGAAACACGTGTC
TGGTCAATATTAACGTAGGCAGAGCAAAGAAAATTCTTGATGCTTTTGCGCAAGGGCGATGGAGATTGGAATGA

Upstream 100 bases:

>100_bases
TTATAATCATGATTTGGATCTATCTAACTGTTTTATAAGTCTGTTATTATATAATTATTATCAAAAAATAAAATTTTAAA
TGTGTATCGTGAAAATGCAG

Downstream 100 bases:

>100_bases
TCAAAGGTATTGAATATACTCACGCATTTCAACCAATCATTAATATTGACGCTGGCAAAGTGGTTTCTTATGAAGTGTTG
TTGAGAGGAAAACATAATGA

Product: BLUF domain-containing protein

Products: NA

Alternate protein names: BLUF Domain Protein; Bluf Domain Protein; Sensors Of Blue-Light Using FAD; Sensors Of Blue-Light Using FAD Family; Expression Activator-Related Protein; Photopigment And Puc Expression Activator

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MNTLLERIKNQKAIMTELIHLIYASKASIDFSKDEIVVLLEKARNTNKFLDVTGMLLSDSGGFLQVLEGEEKTVNQLFSV
ISGDGRHNNVVKIISEAIPERQFDDWTMGEASISRQELVEIEGMNDFFTGNTCLVNINVGRAKKILDAFAQGRWRLE

Sequences:

>Translated_157_residues
MNTLLERIKNQKAIMTELIHLIYASKASIDFSKDEIVVLLEKARNTNKFLDVTGMLLSDSGGFLQVLEGEEKTVNQLFSV
ISGDGRHNNVVKIISEAIPERQFDDWTMGEASISRQELVEIEGMNDFFTGNTCLVNINVGRAKKILDAFAQGRWRLE
>Mature_157_residues
MNTLLERIKNQKAIMTELIHLIYASKASIDFSKDEIVVLLEKARNTNKFLDVTGMLLSDSGGFLQVLEGEEKTVNQLFSV
ISGDGRHNNVVKIISEAIPERQFDDWTMGEASISRQELVEIEGMNDFFTGNTCLVNINVGRAKKILDAFAQGRWRLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17693; Mature: 17693

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50925 BLUF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTLLERIKNQKAIMTELIHLIYASKASIDFSKDEIVVLLEKARNTNKFLDVTGMLLSDS
CCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEHEEEEEECC
GGFLQVLEGEEKTVNQLFSVISGDGRHNNVVKIISEAIPERQFDDWTMGEASISRQELVE
CCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHE
IEGMNDFFTGNTCLVNINVGRAKKILDAFAQGRWRLE
ECCCCCEECCCEEEEEEECCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNTLLERIKNQKAIMTELIHLIYASKASIDFSKDEIVVLLEKARNTNKFLDVTGMLLSDS
CCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCEEEHEEEEEECC
GGFLQVLEGEEKTVNQLFSVISGDGRHNNVVKIISEAIPERQFDDWTMGEASISRQELVE
CCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHCCHHHHHE
IEGMNDFFTGNTCLVNINVGRAKKILDAFAQGRWRLE
ECCCCCEECCCEEEEEEECCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA