Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is nemA [H]
Identifier: 119946705
GI number: 119946705
Start: 3792043
End: 3793155
Strand: Reverse
Name: nemA [H]
Synonym: Ping_3087
Alternate gene names: 119946705
Gene position: 3793155-3792043 (Counterclockwise)
Preceding gene: 119946706
Following gene: 119946703
Centisome position: 83.19
GC content: 52.65
Gene sequence:
>1113_bases ATGAGTAACGAAAATCAGAAAGACGTATTGTTCGATACATTTAAGCTGGGCAACCTGTCGCTGCGAAACCGCGTGCTGAT GTCTCCGCTAACCCGCTCGCGCTCCAGCCAGCCGGGTGATATACCCAATGCGATGAACGTCCAGTACTATGAGCAGCGTG CCAGTGCAGGCCTTATCATCAGCGAAGCGACCCAGGTATCGCCACAGGGCAAGGGCTACGCTTTTACCCCGGGCATTCAC TCGCAAGAGCAGATTGCCGGCTGGAAGCGGGTCACCGACGCAGTTCATAAAGCGGGCGGTCTTATTCACATGCAGCTTTG GCATGTTGGCCGGATTTCTCATCCGGACCTGCAACCCGATGGCCAAAAGCCAGTTGCTCCCTCTGCGATTGCACCCAAAG GTGCTAAAACCTTTGTCAGTGCAACTTCCGGTATGGTGGATATTCTTGAGCCACGTGCTCTGGAAACAGATGAGATCCCC TCTATCGTTGAGCAGTTCAGGGTTGGTGCGGAGAATGCTAAAGCCGCAGGCTTTGATGGTGTTGAAATCCATGCTGCCAA CGGCTACCTGCTGGATCAGTTTCTTAAGAGTGACAGCAACCAGCGTACCGATCAGTATGGTGGCTCCGTCGAAAATCGTA TCCGTCTAACCTTGATGGTAACTGAGGCCGTTGTCGAGGTCTGGGGCAAAGAAAACGTTGGTATTCGCGTTAGCCCAACC GGGAGTTTTAACGCAGTGCATGATCAGAACCCAATTGAAACTTTTGGCACGCTGGCTAAACATCTGAACGATATCGGTAT TGCTTATATCGAGGTGGTGGAAGACTCGTTTCAGGGCAACCATGCCAATGGTCGACCGCAGACTGTGATTGATGCTATTC AGGCGGCTTTTAAAGGTGTATACATCGCCAATGGCGCCTACACCGCGGACGAAGCAAGAACGCGGATAGGTAAAGGCCAG TGTGACCTGGTCACTTTTGGACGCCCATTCATCGCCAATCCGGATCTGCCTGAACGCTTCCGAACCCATGCAGAGCTTAA CCGCTGGGACGACAGCACTTTCTACGGTGGTGACGCTGAGGGTTACATCGACTACCCAACGTTGTCTGTTTAA
Upstream 100 bases:
>100_bases GTGTTTTTTGAACACTGCCTGCGGCCCAGCTAATTTTTTGAAAACCATTGTTAGTAAACTGGCCTAATTAATTCCAATTC ATTTAAAAGGAAATAACACT
Downstream 100 bases:
>100_bases CCGGGGTCTGTGGAGAATTACAGAGACCGCCAATATAAAAATAACGGCTCTGTAGGGCTTCTATTATAAGCCATGAAGGA AAATAACCGCGAATATTAAG
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MSNENQKDVLFDTFKLGNLSLRNRVLMSPLTRSRSSQPGDIPNAMNVQYYEQRASAGLIISEATQVSPQGKGYAFTPGIH SQEQIAGWKRVTDAVHKAGGLIHMQLWHVGRISHPDLQPDGQKPVAPSAIAPKGAKTFVSATSGMVDILEPRALETDEIP SIVEQFRVGAENAKAAGFDGVEIHAANGYLLDQFLKSDSNQRTDQYGGSVENRIRLTLMVTEAVVEVWGKENVGIRVSPT GSFNAVHDQNPIETFGTLAKHLNDIGIAYIEVVEDSFQGNHANGRPQTVIDAIQAAFKGVYIANGAYTADEARTRIGKGQ CDLVTFGRPFIANPDLPERFRTHAELNRWDDSTFYGGDAEGYIDYPTLSV
Sequences:
>Translated_370_residues MSNENQKDVLFDTFKLGNLSLRNRVLMSPLTRSRSSQPGDIPNAMNVQYYEQRASAGLIISEATQVSPQGKGYAFTPGIH SQEQIAGWKRVTDAVHKAGGLIHMQLWHVGRISHPDLQPDGQKPVAPSAIAPKGAKTFVSATSGMVDILEPRALETDEIP SIVEQFRVGAENAKAAGFDGVEIHAANGYLLDQFLKSDSNQRTDQYGGSVENRIRLTLMVTEAVVEVWGKENVGIRVSPT GSFNAVHDQNPIETFGTLAKHLNDIGIAYIEVVEDSFQGNHANGRPQTVIDAIQAAFKGVYIANGAYTADEARTRIGKGQ CDLVTFGRPFIANPDLPERFRTHAELNRWDDSTFYGGDAEGYIDYPTLSV >Mature_369_residues SNENQKDVLFDTFKLGNLSLRNRVLMSPLTRSRSSQPGDIPNAMNVQYYEQRASAGLIISEATQVSPQGKGYAFTPGIHS QEQIAGWKRVTDAVHKAGGLIHMQLWHVGRISHPDLQPDGQKPVAPSAIAPKGAKTFVSATSGMVDILEPRALETDEIPS IVEQFRVGAENAKAAGFDGVEIHAANGYLLDQFLKSDSNQRTDQYGGSVENRIRLTLMVTEAVVEVWGKENVGIRVSPTG SFNAVHDQNPIETFGTLAKHLNDIGIAYIEVVEDSFQGNHANGRPQTVIDAIQAAFKGVYIANGAYTADEARTRIGKGQC DLVTFGRPFIANPDLPERFRTHAELNRWDDSTFYGGDAEGYIDYPTLSV
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=375, Percent_Identity=52.5333333333333, Blast_Score=360, Evalue=1e-100, Organism=Escherichia coli, GI1789463, Length=374, Percent_Identity=28.3422459893048, Blast_Score=115, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17559804, Length=362, Percent_Identity=28.7292817679558, Blast_Score=102, Evalue=4e-22, Organism=Caenorhabditis elegans, GI17559802, Length=298, Percent_Identity=27.8523489932886, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17565138, Length=345, Percent_Identity=25.7971014492754, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI72001454, Length=364, Percent_Identity=27.1978021978022, Blast_Score=95, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17564188, Length=360, Percent_Identity=26.9444444444444, Blast_Score=95, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17540738, Length=351, Percent_Identity=25.6410256410256, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17566914, Length=349, Percent_Identity=25.214899713467, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325086, Length=388, Percent_Identity=38.659793814433, Blast_Score=227, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6321973, Length=383, Percent_Identity=39.1644908616188, Blast_Score=221, Evalue=1e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 40429; Mature: 40297
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNENQKDVLFDTFKLGNLSLRNRVLMSPLTRSRSSQPGDIPNAMNVQYYEQRASAGLII CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEE SEATQVSPQGKGYAFTPGIHSQEQIAGWKRVTDAVHKAGGLIHMQLWHVGRISHPDLQPD ECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCC GQKPVAPSAIAPKGAKTFVSATSGMVDILEPRALETDEIPSIVEQFRVGAENAKAAGFDG CCCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC VEIHAANGYLLDQFLKSDSNQRTDQYGGSVENRIRLTLMVTEAVVEVWGKENVGIRVSPT EEEEECCCHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEEHHHHHHHHCCCCCCEEECCC GSFNAVHDQNPIETFGTLAKHLNDIGIAYIEVVEDSFQGNHANGRPQTVIDAIQAAFKGV CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHCCE YIANGAYTADEARTRIGKGQCDLVTFGRPFIANPDLPERFRTHAELNRWDDSTFYGGDAE EEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCC GYIDYPTLSV CEECCCCCCC >Mature Secondary Structure SNENQKDVLFDTFKLGNLSLRNRVLMSPLTRSRSSQPGDIPNAMNVQYYEQRASAGLII CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEE SEATQVSPQGKGYAFTPGIHSQEQIAGWKRVTDAVHKAGGLIHMQLWHVGRISHPDLQPD ECCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCCC GQKPVAPSAIAPKGAKTFVSATSGMVDILEPRALETDEIPSIVEQFRVGAENAKAAGFDG CCCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC VEIHAANGYLLDQFLKSDSNQRTDQYGGSVENRIRLTLMVTEAVVEVWGKENVGIRVSPT EEEEECCCHHHHHHHHCCCCCCHHHCCCCCCCEEEEEEEEHHHHHHHHCCCCCCEEECCC GSFNAVHDQNPIETFGTLAKHLNDIGIAYIEVVEDSFQGNHANGRPQTVIDAIQAAFKGV CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHCCE YIANGAYTADEARTRIGKGQCDLVTFGRPFIANPDLPERFRTHAELNRWDDSTFYGGDAE EEECCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCEECCCCC GYIDYPTLSV CEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]