Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119946703
Identifier: 119946703
GI number: 119946703
Start: 3787310
End: 3787942
Strand: Reverse
Name: 119946703
Synonym: Ping_3085
Alternate gene names: NA
Gene position: 3787942-3787310 (Counterclockwise)
Preceding gene: 119946705
Following gene: 119946700
Centisome position: 83.08
GC content: 38.86
Gene sequence:
>633_bases ATGAGTGATGAAACACTTTTTGGTATTATAGCTCAAGATATTGAAAATAAAGGATATAGCGTCCTCCCAAGCGCGTTGCC AGAAAAGTTGGCTAGTGCATTATTTTCTTATCAGCAAACCATGGAGGCAGAACAATTTAAAAGTGCAGGCATAGGTAGGG GGAATGAATACCTAGAAAATAAATTTGTCAGAACAGATGAAATTTGTTGGATTACGGGGGACACTGAAACAGGTAAAAAG TGGCTAGATTGGTCTTCAAATCTGCAACGTTTCTTAAACCGACGTTTATTTTTAGGTCTTTTTTCATTTGAAAGTCATTT TGCCCACTATGGACCTGGAGATTATTACAAAAGACATTGTGATGCCTTTAGAGGTGAAGCTAATCGCATTTTATCAATTG TTGTATATTTTAATACCGGCTGGACGAGTGCTGATGGTGGCGAATTAGTGATATATAAAGATGAGCACGATCAAGACGGG ATTAAAGTCGTCCCTCTTTTAGGTACATTGGTTACTTTCTTAAGTGAGGAATTTCCTCATGAAGTGCTTGCTGCTAATCG GGATCGTTATTCTATTGCGGGATGGTTTCGTGTTAATACATCCGTTACCGCTAAAGTAGATCCGCCCCTATAG
Upstream 100 bases:
>100_bases GTTATGCGCTTATATGTCTTTTGAAATAATCAAATGTTTTTATTAATAGGTAATTAATTTGGTAGGCCTAAAGCAATTCC CCTCAATAGAGGGTAGTAGT
Downstream 100 bases:
>100_bases GCTACGCAAGGTAAAGGCGGCGAGGCTGGCCCGAATGGCATGTTCACCTCGGGTGATGCATGGCATCTTAAAAAGGCACG GGCATCTCCGGGTTACTGGT
Product: 2OG-Fe(II) oxygenase
Products: NA
Alternate protein names: 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Alpha Subunit; Oxidoreductase; SM-20 Domain-Containing Protein; Proline Hydroxylase; Oxidoreductase 2OG-Fe(II) Oxygenase Family; SM-20-Related Protein; SM-20-Like Protein; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Protein; SM-20 Domain Protein; Egl Nine-Like Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; Oxygenase; 2og-Fe(Ii) Oxygenase; 2OG-Fe(II) Oxygenase Family; Prolyl 4-Hydroxylase Alpha Subunit Homologue
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSDETLFGIIAQDIENKGYSVLPSALPEKLASALFSYQQTMEAEQFKSAGIGRGNEYLENKFVRTDEICWITGDTETGKK WLDWSSNLQRFLNRRLFLGLFSFESHFAHYGPGDYYKRHCDAFRGEANRILSIVVYFNTGWTSADGGELVIYKDEHDQDG IKVVPLLGTLVTFLSEEFPHEVLAANRDRYSIAGWFRVNTSVTAKVDPPL
Sequences:
>Translated_210_residues MSDETLFGIIAQDIENKGYSVLPSALPEKLASALFSYQQTMEAEQFKSAGIGRGNEYLENKFVRTDEICWITGDTETGKK WLDWSSNLQRFLNRRLFLGLFSFESHFAHYGPGDYYKRHCDAFRGEANRILSIVVYFNTGWTSADGGELVIYKDEHDQDG IKVVPLLGTLVTFLSEEFPHEVLAANRDRYSIAGWFRVNTSVTAKVDPPL >Mature_209_residues SDETLFGIIAQDIENKGYSVLPSALPEKLASALFSYQQTMEAEQFKSAGIGRGNEYLENKFVRTDEICWITGDTETGKKW LDWSSNLQRFLNRRLFLGLFSFESHFAHYGPGDYYKRHCDAFRGEANRILSIVVYFNTGWTSADGGELVIYKDEHDQDGI KVVPLLGTLVTFLSEEFPHEVLAANRDRYSIAGWFRVNTSVTAKVDPPL
Specific function: Unknown
COG id: COG3751
COG function: function code O; Predicted proline hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23852; Mature: 23721
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDETLFGIIAQDIENKGYSVLPSALPEKLASALFSYQQTMEAEQFKSAGIGRGNEYLEN CCCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KFVRTDEICWITGDTETGKKWLDWSSNLQRFLNRRLFLGLFSFESHFAHYGPGDYYKRHC CCCCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DAFRGEANRILSIVVYFNTGWTSADGGELVIYKDEHDQDGIKVVPLLGTLVTFLSEEFPH HHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHCCH EVLAANRDRYSIAGWFRVNTSVTAKVDPPL HHHHCCCCCEEEEEEEEECCEEEEEECCCC >Mature Secondary Structure SDETLFGIIAQDIENKGYSVLPSALPEKLASALFSYQQTMEAEQFKSAGIGRGNEYLEN CCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH KFVRTDEICWITGDTETGKKWLDWSSNLQRFLNRRLFLGLFSFESHFAHYGPGDYYKRHC CCCCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH DAFRGEANRILSIVVYFNTGWTSADGGELVIYKDEHDQDGIKVVPLLGTLVTFLSEEFPH HHHCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHHHHHCCH EVLAANRDRYSIAGWFRVNTSVTAKVDPPL HHHHCCCCCEEEEEEEEECCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA