Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is purP [H]
Identifier: 119946419
GI number: 119946419
Start: 3437692
End: 3438987
Strand: Direct
Name: purP [H]
Synonym: Ping_2793
Alternate gene names: 119946419
Gene position: 3437692-3438987 (Clockwise)
Preceding gene: 119946418
Following gene: 119946422
Centisome position: 75.39
GC content: 43.6
Gene sequence:
>1296_bases ATGTTCGAAAAACTGTTTAAACTCAACGAACACGGAACCTCAGTAAAAACTGAACTTATTGCAGGTACCACCACCTTTTT AACCATGGCTTATATCATTTTTGTTAACCCGCAAATGTTATCTGCCGCCGGTATGGACTCCGGAGCTGTCTTTGTAGCAA CTTGTTTAGCAGCTGCACTCGGCTGCTTTATTATGGGATTTTATGCGAACTACCCTGTTGCACTCGCCCCTGGAATGGGT CTGAATGCCTTTTTCTCTTTTGTGGTTGTTGGCCATATGGGTTACTCATGGCAGGTTGCATTAGGCGCGGTTTTCCTGTC GGGCATCTGCTTTACACTGCTAAGCCTGTTTAAAATTCGCGAATGGATTATAAACTCAATTCCAATGGCGATGCGTAAAG GTATTGCAGCGGGTATCGGTTTATTTTTAGCGCTGATTGCACTGAAAAATGCAGGGATTGTTATTTCTAACCCGCCGACA CTTATCTCACTGGGTGATATGCACGCTTTACCGGCTATTCTTGCTTGTGTGGGTTTCTTTCTCACTATCGCACTGGCACA TTACCGTGTTAAAGGCGGTGTTATGTTCGCAATTTTAGCGATAACACTGATCGGTTTTTTAGCCGGTGATGTGGAGTATA ATGGTATTATGTCAATGCCACCAAGTATTGCACCGACACTTCTACAGATGGATATTGCAGGTGCATTCAATGTGGGTATG ATAAGTATTGTTTTTGCCTTCCTGTTTGTTGATTTGTTTGATACCTCGGGCACCTTAATTGCCGTGGCAGACAAAGGAAA ACTATTAGATAAAGAAGGAAATTTACCGCGTTTAAATCGTGCCTTATTAGCTGACAGTGGCGCATCAATCGCCGGTTCAA TGCTGGGTACATCAACCACCACCAGTTATATTGAAAGTATTGCGGGTGTTGCCGAAGGCGGTCGTACCGGGTTAACTGCG GTGACGGTTGGTCTGTTATTTTTAGTCGCTTTATTCTTTGCTCCATTAGCGGGAATGATACCTGCTTATGCTACAACTGG CGCATTATTATACGTTGCAGTATTGATGGTGGAAGGGCTGAAAACAATTAACTGGGATGATATTACAGAAGCCGCACCGG TTGTTGTTGTTACCCTGATGATGCCATTAACCTTTTCTATTGCTAATGGTATTTCGCTTGGTTTTATCGCCTATGCGGCC ATTAAAGTAATGAGTGGCAAAGCCAAAGACCTAAGTGCAAGCGTTTGGTTCTTAGCGGCATTATTCCTGGCAAAAATGAT TTTCTTCCCGGGTTAA
Upstream 100 bases:
>100_bases TGATTTATCCGTTTGTATCTTTTATAATCCCGTCATTTTTATGCATGCCCCCCTGTCTAAAGTCTGTTAGATAGGATCAC TTATATAATATGGATCTACT
Downstream 100 bases:
>100_bases AAAGTTTAAATTCACTTTTTAATTGCCAAAAAAAACACCCTTTATTTGCATAAAGGGTGTTTTTTATTTTTCTGCTGTAA CAATCTTTATAACTCAATAA
Product: xanthine/uracil/vitamin C permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MFEKLFKLNEHGTSVKTELIAGTTTFLTMAYIIFVNPQMLSAAGMDSGAVFVATCLAAALGCFIMGFYANYPVALAPGMG LNAFFSFVVVGHMGYSWQVALGAVFLSGICFTLLSLFKIREWIINSIPMAMRKGIAAGIGLFLALIALKNAGIVISNPPT LISLGDMHALPAILACVGFFLTIALAHYRVKGGVMFAILAITLIGFLAGDVEYNGIMSMPPSIAPTLLQMDIAGAFNVGM ISIVFAFLFVDLFDTSGTLIAVADKGKLLDKEGNLPRLNRALLADSGASIAGSMLGTSTTTSYIESIAGVAEGGRTGLTA VTVGLLFLVALFFAPLAGMIPAYATTGALLYVAVLMVEGLKTINWDDITEAAPVVVVTLMMPLTFSIANGISLGFIAYAA IKVMSGKAKDLSASVWFLAALFLAKMIFFPG
Sequences:
>Translated_431_residues MFEKLFKLNEHGTSVKTELIAGTTTFLTMAYIIFVNPQMLSAAGMDSGAVFVATCLAAALGCFIMGFYANYPVALAPGMG LNAFFSFVVVGHMGYSWQVALGAVFLSGICFTLLSLFKIREWIINSIPMAMRKGIAAGIGLFLALIALKNAGIVISNPPT LISLGDMHALPAILACVGFFLTIALAHYRVKGGVMFAILAITLIGFLAGDVEYNGIMSMPPSIAPTLLQMDIAGAFNVGM ISIVFAFLFVDLFDTSGTLIAVADKGKLLDKEGNLPRLNRALLADSGASIAGSMLGTSTTTSYIESIAGVAEGGRTGLTA VTVGLLFLVALFFAPLAGMIPAYATTGALLYVAVLMVEGLKTINWDDITEAAPVVVVTLMMPLTFSIANGISLGFIAYAA IKVMSGKAKDLSASVWFLAALFLAKMIFFPG >Mature_431_residues MFEKLFKLNEHGTSVKTELIAGTTTFLTMAYIIFVNPQMLSAAGMDSGAVFVATCLAAALGCFIMGFYANYPVALAPGMG LNAFFSFVVVGHMGYSWQVALGAVFLSGICFTLLSLFKIREWIINSIPMAMRKGIAAGIGLFLALIALKNAGIVISNPPT LISLGDMHALPAILACVGFFLTIALAHYRVKGGVMFAILAITLIGFLAGDVEYNGIMSMPPSIAPTLLQMDIAGAFNVGM ISIVFAFLFVDLFDTSGTLIAVADKGKLLDKEGNLPRLNRALLADSGASIAGSMLGTSTTTSYIESIAGVAEGGRTGLTA VTVGLLFLVALFFAPLAGMIPAYATTGALLYVAVLMVEGLKTINWDDITEAAPVVVVTLMMPLTFSIANGISLGFIAYAA IKVMSGKAKDLSASVWFLAALFLAKMIFFPG
Specific function: High-affinity uptake of adenine [H]
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=428, Percent_Identity=52.803738317757, Blast_Score=466, Evalue=1e-133, Organism=Escherichia coli, GI87082309, Length=425, Percent_Identity=51.0588235294118, Blast_Score=454, Evalue=1e-129, Organism=Escherichia coli, GI1790499, Length=420, Percent_Identity=40, Blast_Score=285, Evalue=3e-78, Organism=Escherichia coli, GI48994909, Length=420, Percent_Identity=38.0952380952381, Blast_Score=261, Evalue=5e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 45227; Mature: 45227
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEKLFKLNEHGTSVKTELIAGTTTFLTMAYIIFVNPQMLSAAGMDSGAVFVATCLAAAL CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHH GCFIMGFYANYPVALAPGMGLNAFFSFVVVGHMGYSWQVALGAVFLSGICFTLLSLFKIR HHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EWIINSIPMAMRKGIAAGIGLFLALIALKNAGIVISNPPTLISLGDMHALPAILACVGFF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECHHHHHHHHHHHHHHH LTIALAHYRVKGGVMFAILAITLIGFLAGDVEYNGIMSMPPSIAPTLLQMDIAGAFNVGM HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH ISIVFAFLFVDLFDTSGTLIAVADKGKLLDKEGNLPRLNRALLADSGASIAGSMLGTSTT HHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCHH TSYIESIAGVAEGGRTGLTAVTVGLLFLVALFFAPLAGMIPAYATTGALLYVAVLMVEGL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KTINWDDITEAAPVVVVTLMMPLTFSIANGISLGFIAYAAIKVMSGKAKDLSASVWFLAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LFLAKMIFFPG HHHHHHHHCCC >Mature Secondary Structure MFEKLFKLNEHGTSVKTELIAGTTTFLTMAYIIFVNPQMLSAAGMDSGAVFVATCLAAAL CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHH GCFIMGFYANYPVALAPGMGLNAFFSFVVVGHMGYSWQVALGAVFLSGICFTLLSLFKIR HHHHHHHHHCCCEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH EWIINSIPMAMRKGIAAGIGLFLALIALKNAGIVISNPPTLISLGDMHALPAILACVGFF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEECHHHHHHHHHHHHHHH LTIALAHYRVKGGVMFAILAITLIGFLAGDVEYNGIMSMPPSIAPTLLQMDIAGAFNVGM HHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH ISIVFAFLFVDLFDTSGTLIAVADKGKLLDKEGNLPRLNRALLADSGASIAGSMLGTSTT HHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHCCCHH TSYIESIAGVAEGGRTGLTAVTVGLLFLVALFFAPLAGMIPAYATTGALLYVAVLMVEGL HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KTINWDDITEAAPVVVVTLMMPLTFSIANGISLGFIAYAAIKVMSGKAKDLSASVWFLAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH LFLAKMIFFPG HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7686882; 9278503 [H]