Definition Psychromonas ingrahamii 37, complete genome.
Accession NC_008709
Length 4,559,598

Click here to switch to the map view.

The map label for this gene is 119946418

Identifier: 119946418

GI number: 119946418

Start: 3435772

End: 3437499

Strand: Direct

Name: 119946418

Synonym: Ping_2792

Alternate gene names: NA

Gene position: 3435772-3437499 (Clockwise)

Preceding gene: 119946417

Following gene: 119946419

Centisome position: 75.35

GC content: 40.8

Gene sequence:

>1728_bases
TTGAAAAAAATATTAATAGTAACCGCGATCGCAGCAGCGGGAGCCGCTGCATATTTTGCTAACCAGCAGCTACAAACGTC
ACCCCAAGCTTACAATGTACTTGATTACGTACCTGCTGACACCCCCTTATTAAGCGCTCAACTTAAACCCTTTCCGCTTA
AAGATTATTTAAATAGCTCACCGCAGTTAAACACAGCTAAAGACCAAGAAACATTGCAGAATATTGCAGTTGAAGGCGAT
CCGCAGTCAAAATTTTTCTTAAGTATCGCAAAAAGTTATCAAACGTCATTACCGGATACCGAGATGTTTCTTAATACCTT
CGGCCTGGCGGATAATATCCGCGCTTATTTTTATATGTTAGGCGCATTACCCGTCTTAAAAATTGAAGTGGAAAATACAC
AGGCAATTTGGGATTTATTAGATAAAGCGGAACAGGAAAGTGGTTACTCTCACCGTACCGGCAAAAGACAAGAGACTGAA
TATCGCGCTTACCGGTTGAATGATTCATCAGAAGCACAAACAACAGATCTGATTATCTCTCAAAATAATGGCTTATTAAC
CATCACGCTAAACAGTTCATTAAATAAAGAAACCTTATTAAGCAGCGCGTTAGGTTTACTTAAAGCTGAAAATCCGATTA
CCGAATCGGGCATTTTAGAAGAGATTGCCAGTAAATATAATTTTACAGATCAAAATATCGCTTTTATCAATCATCAGGAA
ATAATAAAGGGATTAACCTCGGTCAATGCTAACCAGCTTGCACGTCACCTAAGCCTACTGTTTGCGCAACAGGATCAGGA
AAATCCTCTGTCAGCGTTCAGAACCGCTGAATGTCAGGCAGAGTTGACCACTGTCGCCAATAATTGGCCGCGTACCGTTT
TTGGTTATACAGATTTATCGGTAACAGGGACTCAATCCACAATGGATTTGTCCACTGTTATTGAAAGTAAAAACCAAACA
ATTCTAACCGCCCTGCAATCGCTGCGCGGTTATATACCGCAATACACACAAAATATTAAAGACAATGCCTTTGCATTAGG
TTTTGGCGTGGATATCAATCAATTAAGCTCGGCAACAGCCTCCATATTAACAGATTTAAAAACACCAAATTATCAATGTG
CGCCATTACAAGAGATCCAAGATACGTTACAGCAACAGGGGCAAAACTATTCTATGATGCTGGGCATGGCAGGCGGCATG
GCAAATGGCCTTAAAGGTTTTAGTGTTGCAGTGCTGGACTACAGTATCAGTAAACAAGAAGGTACGCCTTCATTAGAAAG
TCTCGATGCCCTGCTTAGCTATTCTGCAGATAATCCACTGGCCCTGTTCAACTCATTAAAAATGTTCAGCCCGGATCTGC
AGCGCCTGCAGCCACCAGCTGATGGTAGTGCGGTGGATTTATCGGAATTTATACCTAAGGGGTTAAATATCAGCCCTAAG
ATGGCCATTAAAGGTCAGAATCTGGTTATCTACAATGGTGAGAAATCTGAACAGCAGGCAGATTTAATGAGCAGTGAAGC
ATTGACTAAAAATGGTCTTTTCACTTTTTCATTCGACTTAACAAGAATGTTTGACCCGATAATAACAGCCACGGAGCTAA
GCGGAGAAAGCATGCCCAGTGAGGCGATGTTTTTACAGAACTACAATATGCGCATCAAATTTGATATAGACATCAATCAA
CAGGGTATTGTCTTTAACTCTCACGTCAGTAACGAAGTTAAAAAATAA

Upstream 100 bases:

>100_bases
ATTCAGTTAAGTTAAGTTGTTACGCATATTTCTAATTGTTACAACTCTGTATCGCAAGGTTATAATCAATTTCCATAGAG
TACCAACGGGAGAGTCAAAC

Downstream 100 bases:

>100_bases
AAAAAAAGGGTAGCTGATTCCGGTCAGCTTATCCTTTTTTACCCATTGATCATCAAATCCATCTCATTATTTTAAAATAT
TAGCATTAAAGCTGATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 575; Mature: 575

Protein sequence:

>575_residues
MKKILIVTAIAAAGAAAYFANQQLQTSPQAYNVLDYVPADTPLLSAQLKPFPLKDYLNSSPQLNTAKDQETLQNIAVEGD
PQSKFFLSIAKSYQTSLPDTEMFLNTFGLADNIRAYFYMLGALPVLKIEVENTQAIWDLLDKAEQESGYSHRTGKRQETE
YRAYRLNDSSEAQTTDLIISQNNGLLTITLNSSLNKETLLSSALGLLKAENPITESGILEEIASKYNFTDQNIAFINHQE
IIKGLTSVNANQLARHLSLLFAQQDQENPLSAFRTAECQAELTTVANNWPRTVFGYTDLSVTGTQSTMDLSTVIESKNQT
ILTALQSLRGYIPQYTQNIKDNAFALGFGVDINQLSSATASILTDLKTPNYQCAPLQEIQDTLQQQGQNYSMMLGMAGGM
ANGLKGFSVAVLDYSISKQEGTPSLESLDALLSYSADNPLALFNSLKMFSPDLQRLQPPADGSAVDLSEFIPKGLNISPK
MAIKGQNLVIYNGEKSEQQADLMSSEALTKNGLFTFSFDLTRMFDPIITATELSGESMPSEAMFLQNYNMRIKFDIDINQ
QGIVFNSHVSNEVKK

Sequences:

>Translated_575_residues
MKKILIVTAIAAAGAAAYFANQQLQTSPQAYNVLDYVPADTPLLSAQLKPFPLKDYLNSSPQLNTAKDQETLQNIAVEGD
PQSKFFLSIAKSYQTSLPDTEMFLNTFGLADNIRAYFYMLGALPVLKIEVENTQAIWDLLDKAEQESGYSHRTGKRQETE
YRAYRLNDSSEAQTTDLIISQNNGLLTITLNSSLNKETLLSSALGLLKAENPITESGILEEIASKYNFTDQNIAFINHQE
IIKGLTSVNANQLARHLSLLFAQQDQENPLSAFRTAECQAELTTVANNWPRTVFGYTDLSVTGTQSTMDLSTVIESKNQT
ILTALQSLRGYIPQYTQNIKDNAFALGFGVDINQLSSATASILTDLKTPNYQCAPLQEIQDTLQQQGQNYSMMLGMAGGM
ANGLKGFSVAVLDYSISKQEGTPSLESLDALLSYSADNPLALFNSLKMFSPDLQRLQPPADGSAVDLSEFIPKGLNISPK
MAIKGQNLVIYNGEKSEQQADLMSSEALTKNGLFTFSFDLTRMFDPIITATELSGESMPSEAMFLQNYNMRIKFDIDINQ
QGIVFNSHVSNEVKK
>Mature_575_residues
MKKILIVTAIAAAGAAAYFANQQLQTSPQAYNVLDYVPADTPLLSAQLKPFPLKDYLNSSPQLNTAKDQETLQNIAVEGD
PQSKFFLSIAKSYQTSLPDTEMFLNTFGLADNIRAYFYMLGALPVLKIEVENTQAIWDLLDKAEQESGYSHRTGKRQETE
YRAYRLNDSSEAQTTDLIISQNNGLLTITLNSSLNKETLLSSALGLLKAENPITESGILEEIASKYNFTDQNIAFINHQE
IIKGLTSVNANQLARHLSLLFAQQDQENPLSAFRTAECQAELTTVANNWPRTVFGYTDLSVTGTQSTMDLSTVIESKNQT
ILTALQSLRGYIPQYTQNIKDNAFALGFGVDINQLSSATASILTDLKTPNYQCAPLQEIQDTLQQQGQNYSMMLGMAGGM
ANGLKGFSVAVLDYSISKQEGTPSLESLDALLSYSADNPLALFNSLKMFSPDLQRLQPPADGSAVDLSEFIPKGLNISPK
MAIKGQNLVIYNGEKSEQQADLMSSEALTKNGLFTFSFDLTRMFDPIITATELSGESMPSEAMFLQNYNMRIKFDIDINQ
QGIVFNSHVSNEVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63339; Mature: 63339

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILIVTAIAAAGAAAYFANQQLQTSPQAYNVLDYVPADTPLLSAQLKPFPLKDYLNSS
CCEEEEEEEHHHHHHHHHHHCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCC
PQLNTAKDQETLQNIAVEGDPQSKFFLSIAKSYQTSLPDTEMFLNTFGLADNIRAYFYML
CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH
GALPVLKIEVENTQAIWDLLDKAEQESGYSHRTGKRQETEYRAYRLNDSSEAQTTDLIIS
HCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEE
QNNGLLTITLNSSLNKETLLSSALGLLKAENPITESGILEEIASKYNFTDQNIAFINHQE
CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECHHH
IIKGLTSVNANQLARHLSLLFAQQDQENPLSAFRTAECQAELTTVANNWPRTVFGYTDLS
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
VTGTQSTMDLSTVIESKNQTILTALQSLRGYIPQYTQNIKDNAFALGFGVDINQLSSATA
EECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCHHHHHHHHH
SILTDLKTPNYQCAPLQEIQDTLQQQGQNYSMMLGMAGGMANGLKGFSVAVLDYSISKQE
HHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCC
GTPSLESLDALLSYSADNPLALFNSLKMFSPDLQRLQPPADGSAVDLSEFIPKGLNISPK
CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCEEEHHHHCCCCCCCCCC
MAIKGQNLVIYNGEKSEQQADLMSSEALTKNGLFTFSFDLTRMFDPIITATELSGESMPS
EEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHEEEECCCCCCCC
EAMFLQNYNMRIKFDIDINQQGIVFNSHVSNEVKK
HHHHEECCCEEEEEEEECCCCCEEEECCCHHHHCC
>Mature Secondary Structure
MKKILIVTAIAAAGAAAYFANQQLQTSPQAYNVLDYVPADTPLLSAQLKPFPLKDYLNSS
CCEEEEEEEHHHHHHHHHHHCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCC
PQLNTAKDQETLQNIAVEGDPQSKFFLSIAKSYQTSLPDTEMFLNTFGLADNIRAYFYML
CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH
GALPVLKIEVENTQAIWDLLDKAEQESGYSHRTGKRQETEYRAYRLNDSSEAQTTDLIIS
HCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEE
QNNGLLTITLNSSLNKETLLSSALGLLKAENPITESGILEEIASKYNFTDQNIAFINHQE
CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECHHH
IIKGLTSVNANQLARHLSLLFAQQDQENPLSAFRTAECQAELTTVANNWPRTVFGYTDLS
HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE
VTGTQSTMDLSTVIESKNQTILTALQSLRGYIPQYTQNIKDNAFALGFGVDINQLSSATA
EECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCHHHHHHHHH
SILTDLKTPNYQCAPLQEIQDTLQQQGQNYSMMLGMAGGMANGLKGFSVAVLDYSISKQE
HHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCC
GTPSLESLDALLSYSADNPLALFNSLKMFSPDLQRLQPPADGSAVDLSEFIPKGLNISPK
CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCEEEHHHHCCCCCCCCCC
MAIKGQNLVIYNGEKSEQQADLMSSEALTKNGLFTFSFDLTRMFDPIITATELSGESMPS
EEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHEEEECCCCCCCC
EAMFLQNYNMRIKFDIDINQQGIVFNSHVSNEVKK
HHHHEECCCEEEEEEEECCCCCEEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA