Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119946418
Identifier: 119946418
GI number: 119946418
Start: 3435772
End: 3437499
Strand: Direct
Name: 119946418
Synonym: Ping_2792
Alternate gene names: NA
Gene position: 3435772-3437499 (Clockwise)
Preceding gene: 119946417
Following gene: 119946419
Centisome position: 75.35
GC content: 40.8
Gene sequence:
>1728_bases TTGAAAAAAATATTAATAGTAACCGCGATCGCAGCAGCGGGAGCCGCTGCATATTTTGCTAACCAGCAGCTACAAACGTC ACCCCAAGCTTACAATGTACTTGATTACGTACCTGCTGACACCCCCTTATTAAGCGCTCAACTTAAACCCTTTCCGCTTA AAGATTATTTAAATAGCTCACCGCAGTTAAACACAGCTAAAGACCAAGAAACATTGCAGAATATTGCAGTTGAAGGCGAT CCGCAGTCAAAATTTTTCTTAAGTATCGCAAAAAGTTATCAAACGTCATTACCGGATACCGAGATGTTTCTTAATACCTT CGGCCTGGCGGATAATATCCGCGCTTATTTTTATATGTTAGGCGCATTACCCGTCTTAAAAATTGAAGTGGAAAATACAC AGGCAATTTGGGATTTATTAGATAAAGCGGAACAGGAAAGTGGTTACTCTCACCGTACCGGCAAAAGACAAGAGACTGAA TATCGCGCTTACCGGTTGAATGATTCATCAGAAGCACAAACAACAGATCTGATTATCTCTCAAAATAATGGCTTATTAAC CATCACGCTAAACAGTTCATTAAATAAAGAAACCTTATTAAGCAGCGCGTTAGGTTTACTTAAAGCTGAAAATCCGATTA CCGAATCGGGCATTTTAGAAGAGATTGCCAGTAAATATAATTTTACAGATCAAAATATCGCTTTTATCAATCATCAGGAA ATAATAAAGGGATTAACCTCGGTCAATGCTAACCAGCTTGCACGTCACCTAAGCCTACTGTTTGCGCAACAGGATCAGGA AAATCCTCTGTCAGCGTTCAGAACCGCTGAATGTCAGGCAGAGTTGACCACTGTCGCCAATAATTGGCCGCGTACCGTTT TTGGTTATACAGATTTATCGGTAACAGGGACTCAATCCACAATGGATTTGTCCACTGTTATTGAAAGTAAAAACCAAACA ATTCTAACCGCCCTGCAATCGCTGCGCGGTTATATACCGCAATACACACAAAATATTAAAGACAATGCCTTTGCATTAGG TTTTGGCGTGGATATCAATCAATTAAGCTCGGCAACAGCCTCCATATTAACAGATTTAAAAACACCAAATTATCAATGTG CGCCATTACAAGAGATCCAAGATACGTTACAGCAACAGGGGCAAAACTATTCTATGATGCTGGGCATGGCAGGCGGCATG GCAAATGGCCTTAAAGGTTTTAGTGTTGCAGTGCTGGACTACAGTATCAGTAAACAAGAAGGTACGCCTTCATTAGAAAG TCTCGATGCCCTGCTTAGCTATTCTGCAGATAATCCACTGGCCCTGTTCAACTCATTAAAAATGTTCAGCCCGGATCTGC AGCGCCTGCAGCCACCAGCTGATGGTAGTGCGGTGGATTTATCGGAATTTATACCTAAGGGGTTAAATATCAGCCCTAAG ATGGCCATTAAAGGTCAGAATCTGGTTATCTACAATGGTGAGAAATCTGAACAGCAGGCAGATTTAATGAGCAGTGAAGC ATTGACTAAAAATGGTCTTTTCACTTTTTCATTCGACTTAACAAGAATGTTTGACCCGATAATAACAGCCACGGAGCTAA GCGGAGAAAGCATGCCCAGTGAGGCGATGTTTTTACAGAACTACAATATGCGCATCAAATTTGATATAGACATCAATCAA CAGGGTATTGTCTTTAACTCTCACGTCAGTAACGAAGTTAAAAAATAA
Upstream 100 bases:
>100_bases ATTCAGTTAAGTTAAGTTGTTACGCATATTTCTAATTGTTACAACTCTGTATCGCAAGGTTATAATCAATTTCCATAGAG TACCAACGGGAGAGTCAAAC
Downstream 100 bases:
>100_bases AAAAAAAGGGTAGCTGATTCCGGTCAGCTTATCCTTTTTTACCCATTGATCATCAAATCCATCTCATTATTTTAAAATAT TAGCATTAAAGCTGATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MKKILIVTAIAAAGAAAYFANQQLQTSPQAYNVLDYVPADTPLLSAQLKPFPLKDYLNSSPQLNTAKDQETLQNIAVEGD PQSKFFLSIAKSYQTSLPDTEMFLNTFGLADNIRAYFYMLGALPVLKIEVENTQAIWDLLDKAEQESGYSHRTGKRQETE YRAYRLNDSSEAQTTDLIISQNNGLLTITLNSSLNKETLLSSALGLLKAENPITESGILEEIASKYNFTDQNIAFINHQE IIKGLTSVNANQLARHLSLLFAQQDQENPLSAFRTAECQAELTTVANNWPRTVFGYTDLSVTGTQSTMDLSTVIESKNQT ILTALQSLRGYIPQYTQNIKDNAFALGFGVDINQLSSATASILTDLKTPNYQCAPLQEIQDTLQQQGQNYSMMLGMAGGM ANGLKGFSVAVLDYSISKQEGTPSLESLDALLSYSADNPLALFNSLKMFSPDLQRLQPPADGSAVDLSEFIPKGLNISPK MAIKGQNLVIYNGEKSEQQADLMSSEALTKNGLFTFSFDLTRMFDPIITATELSGESMPSEAMFLQNYNMRIKFDIDINQ QGIVFNSHVSNEVKK
Sequences:
>Translated_575_residues MKKILIVTAIAAAGAAAYFANQQLQTSPQAYNVLDYVPADTPLLSAQLKPFPLKDYLNSSPQLNTAKDQETLQNIAVEGD PQSKFFLSIAKSYQTSLPDTEMFLNTFGLADNIRAYFYMLGALPVLKIEVENTQAIWDLLDKAEQESGYSHRTGKRQETE YRAYRLNDSSEAQTTDLIISQNNGLLTITLNSSLNKETLLSSALGLLKAENPITESGILEEIASKYNFTDQNIAFINHQE IIKGLTSVNANQLARHLSLLFAQQDQENPLSAFRTAECQAELTTVANNWPRTVFGYTDLSVTGTQSTMDLSTVIESKNQT ILTALQSLRGYIPQYTQNIKDNAFALGFGVDINQLSSATASILTDLKTPNYQCAPLQEIQDTLQQQGQNYSMMLGMAGGM ANGLKGFSVAVLDYSISKQEGTPSLESLDALLSYSADNPLALFNSLKMFSPDLQRLQPPADGSAVDLSEFIPKGLNISPK MAIKGQNLVIYNGEKSEQQADLMSSEALTKNGLFTFSFDLTRMFDPIITATELSGESMPSEAMFLQNYNMRIKFDIDINQ QGIVFNSHVSNEVKK >Mature_575_residues MKKILIVTAIAAAGAAAYFANQQLQTSPQAYNVLDYVPADTPLLSAQLKPFPLKDYLNSSPQLNTAKDQETLQNIAVEGD PQSKFFLSIAKSYQTSLPDTEMFLNTFGLADNIRAYFYMLGALPVLKIEVENTQAIWDLLDKAEQESGYSHRTGKRQETE YRAYRLNDSSEAQTTDLIISQNNGLLTITLNSSLNKETLLSSALGLLKAENPITESGILEEIASKYNFTDQNIAFINHQE IIKGLTSVNANQLARHLSLLFAQQDQENPLSAFRTAECQAELTTVANNWPRTVFGYTDLSVTGTQSTMDLSTVIESKNQT ILTALQSLRGYIPQYTQNIKDNAFALGFGVDINQLSSATASILTDLKTPNYQCAPLQEIQDTLQQQGQNYSMMLGMAGGM ANGLKGFSVAVLDYSISKQEGTPSLESLDALLSYSADNPLALFNSLKMFSPDLQRLQPPADGSAVDLSEFIPKGLNISPK MAIKGQNLVIYNGEKSEQQADLMSSEALTKNGLFTFSFDLTRMFDPIITATELSGESMPSEAMFLQNYNMRIKFDIDINQ QGIVFNSHVSNEVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63339; Mature: 63339
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILIVTAIAAAGAAAYFANQQLQTSPQAYNVLDYVPADTPLLSAQLKPFPLKDYLNSS CCEEEEEEEHHHHHHHHHHHCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCC PQLNTAKDQETLQNIAVEGDPQSKFFLSIAKSYQTSLPDTEMFLNTFGLADNIRAYFYML CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH GALPVLKIEVENTQAIWDLLDKAEQESGYSHRTGKRQETEYRAYRLNDSSEAQTTDLIIS HCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEE QNNGLLTITLNSSLNKETLLSSALGLLKAENPITESGILEEIASKYNFTDQNIAFINHQE CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECHHH IIKGLTSVNANQLARHLSLLFAQQDQENPLSAFRTAECQAELTTVANNWPRTVFGYTDLS HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE VTGTQSTMDLSTVIESKNQTILTALQSLRGYIPQYTQNIKDNAFALGFGVDINQLSSATA EECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCHHHHHHHHH SILTDLKTPNYQCAPLQEIQDTLQQQGQNYSMMLGMAGGMANGLKGFSVAVLDYSISKQE HHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCC GTPSLESLDALLSYSADNPLALFNSLKMFSPDLQRLQPPADGSAVDLSEFIPKGLNISPK CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCEEEHHHHCCCCCCCCCC MAIKGQNLVIYNGEKSEQQADLMSSEALTKNGLFTFSFDLTRMFDPIITATELSGESMPS EEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHEEEECCCCCCCC EAMFLQNYNMRIKFDIDINQQGIVFNSHVSNEVKK HHHHEECCCEEEEEEEECCCCCEEEECCCHHHHCC >Mature Secondary Structure MKKILIVTAIAAAGAAAYFANQQLQTSPQAYNVLDYVPADTPLLSAQLKPFPLKDYLNSS CCEEEEEEEHHHHHHHHHHHCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCC PQLNTAKDQETLQNIAVEGDPQSKFFLSIAKSYQTSLPDTEMFLNTFGLADNIRAYFYML CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHH GALPVLKIEVENTQAIWDLLDKAEQESGYSHRTGKRQETEYRAYRLNDSSEAQTTDLIIS HCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEE QNNGLLTITLNSSLNKETLLSSALGLLKAENPITESGILEEIASKYNFTDQNIAFINHQE CCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEECHHH IIKGLTSVNANQLARHLSLLFAQQDQENPLSAFRTAECQAELTTVANNWPRTVFGYTDLS HHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE VTGTQSTMDLSTVIESKNQTILTALQSLRGYIPQYTQNIKDNAFALGFGVDINQLSSATA EECCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCEEEEEECCCHHHHHHHHH SILTDLKTPNYQCAPLQEIQDTLQQQGQNYSMMLGMAGGMANGLKGFSVAVLDYSISKQE HHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCC GTPSLESLDALLSYSADNPLALFNSLKMFSPDLQRLQPPADGSAVDLSEFIPKGLNISPK CCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCEEEHHHHCCCCCCCCCC MAIKGQNLVIYNGEKSEQQADLMSSEALTKNGLFTFSFDLTRMFDPIITATELSGESMPS EEECCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHEEEECCCCCCCC EAMFLQNYNMRIKFDIDINQQGIVFNSHVSNEVKK HHHHEECCCEEEEEEEECCCCCEEEECCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA