Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945657
Identifier: 119945657
GI number: 119945657
Start: 2395836
End: 2396330
Strand: Reverse
Name: 119945657
Synonym: Ping_1970
Alternate gene names: NA
Gene position: 2396330-2395836 (Counterclockwise)
Preceding gene: 119945658
Following gene: 119945656
Centisome position: 52.56
GC content: 35.96
Gene sequence:
>495_bases ATGCCGCAGTACTCATTGTTAAGCGAGTTAGAACGGAAAGTCATCTTGTTTAATTATGAAAAAAGAGGCCAGAAAAACAG CTTATTGTCCTTTGCCAGATTAAGTGATGATGATCGTTCTTTTATCTCCACGGAAGGGGATTATATTCTGTGGGAACTGA GTAAAAGAAAATTTGAAGCGGATGAAGTTATTTCGCATTCATGGATTATTATGTCAAAGCAAAACTTGCCATTGATTTTA AAATTCAACGCAGATCACCATCTGCGGGTAGGCAGTTTATTCGATGATAAAACAGTTGATGGTATTTGGGGTTTAGACGG TGGGATCCTAAGCATTTTTTTTAGATATGAACAGCGCAATTATTATATTGATATCATCGCTAATAATAAGCGTTCCATAC ATTCTGCTCTGCAAATTACCGATGAGCACAGTGTTGATCTTTTAAAAGTCATTCCACTGCGCAATGAAAAATATGGAATA TCATTAATTGAGTGA
Upstream 100 bases:
>100_bases CGTTTCATTAGCTGAAATATGATTTATCTTGTAATAAAATTTGAATTGTAAAAAATTCAACGCTGTTATCCATACTGAGC TATTTTAAGGAGTAGTATTT
Downstream 100 bases:
>100_bases TTTTTTATACTCTGTTCTGCGCCATTAGTCAAATCACCGAAAACGCGTGCAGGAAGCTGCATTTAAGCCTTGTTAAATAC AATTCATTTTTAAAAGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MPQYSLLSELERKVILFNYEKRGQKNSLLSFARLSDDDRSFISTEGDYILWELSKRKFEADEVISHSWIIMSKQNLPLIL KFNADHHLRVGSLFDDKTVDGIWGLDGGILSIFFRYEQRNYYIDIIANNKRSIHSALQITDEHSVDLLKVIPLRNEKYGI SLIE
Sequences:
>Translated_164_residues MPQYSLLSELERKVILFNYEKRGQKNSLLSFARLSDDDRSFISTEGDYILWELSKRKFEADEVISHSWIIMSKQNLPLIL KFNADHHLRVGSLFDDKTVDGIWGLDGGILSIFFRYEQRNYYIDIIANNKRSIHSALQITDEHSVDLLKVIPLRNEKYGI SLIE >Mature_163_residues PQYSLLSELERKVILFNYEKRGQKNSLLSFARLSDDDRSFISTEGDYILWELSKRKFEADEVISHSWIIMSKQNLPLILK FNADHHLRVGSLFDDKTVDGIWGLDGGILSIFFRYEQRNYYIDIIANNKRSIHSALQITDEHSVDLLKVIPLRNEKYGIS LIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19181; Mature: 19050
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQYSLLSELERKVILFNYEKRGQKNSLLSFARLSDDDRSFISTEGDYILWELSKRKFEA CCCHHHHHHHCCEEEEEECCCCCCCCHHEEHHHCCCCCCCEECCCCCEEEEEECCCCCCH DEVISHSWIIMSKQNLPLILKFNADHHLRVGSLFDDKTVDGIWGLDGGILSIFFRYEQRN HHHCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCCCCCCEECCCCCEEEEEEEEECCC YYIDIIANNKRSIHSALQITDEHSVDLLKVIPLRNEKYGISLIE EEEEEEECCCHHHHHHEEECCCCCCEEEEEEECCCCCCCEEEEC >Mature Secondary Structure PQYSLLSELERKVILFNYEKRGQKNSLLSFARLSDDDRSFISTEGDYILWELSKRKFEA CCHHHHHHHCCEEEEEECCCCCCCCHHEEHHHCCCCCCCEECCCCCEEEEEECCCCCCH DEVISHSWIIMSKQNLPLILKFNADHHLRVGSLFDDKTVDGIWGLDGGILSIFFRYEQRN HHHCCCEEEEEECCCCCEEEEECCCCCEEECCCCCCCCCCCEECCCCCEEEEEEEEECCC YYIDIIANNKRSIHSALQITDEHSVDLLKVIPLRNEKYGISLIE EEEEEEECCCHHHHHHEEECCCCCCEEEEEEECCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA