Definition | Psychromonas ingrahamii 37, complete genome. |
---|---|
Accession | NC_008709 |
Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119945623
Identifier: 119945623
GI number: 119945623
Start: 2359621
End: 2360046
Strand: Reverse
Name: 119945623
Synonym: Ping_1933
Alternate gene names: NA
Gene position: 2360046-2359621 (Counterclockwise)
Preceding gene: 119945624
Following gene: 119945622
Centisome position: 51.76
GC content: 39.67
Gene sequence:
>426_bases GTGGAATTTACATGGTCTAGCAATTTTAATGAAATAGATTGGAATGAATTATCCGAACTTTTTCGTATCGCGCCTCTTGG TCAAAAGTCAGCAAAACATTTAGAACTTGTATTTAATAGCAGCTTGTTCAAGTTTATTGTTATGGATTCTGGAAAACTCA TTGGTGCTGGTAGAGCGTTAGCGGATGGTGCAGATTGCGCTTACATTTGTGATATTGTTATCCATCCTGAATATCAAGGT AGGGGCTTGGGTAAGCAACTTGTGAATAAACTTATCGATGCATCCAGCGGGCATAGCAAGATAATCATGTATGCGAAACC GGGTAAAGAGGGGTTTTATCTGGGGTTGGGTTTTAAGTTTATGACGACGGCAATGGCCATTTTTCAAAATCAACCGCTTG CTGTTAAATCTGGCGTGCTCAAATAA
Upstream 100 bases:
>100_bases AAGCGGGAAAAAATACCCTTGGTTTTTTTGCTCCGCTCAATATTTTAGCCCACTATATTATTGCTTCTTAATAAGGGCGT TATTTTTTCAGGGAGTTACA
Downstream 100 bases:
>100_bases AAACGACTGCACTCGAACGCGATATAGCTGCGACGGTCTTTACTGAAGACAAAAATAATATCAACTTATTTGCTGGTGGA TAAACCCTTAGTGCTATTGA
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: GNAT Family Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase; Gcn5-Related N-Acetyltransferase
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MEFTWSSNFNEIDWNELSELFRIAPLGQKSAKHLELVFNSSLFKFIVMDSGKLIGAGRALADGADCAYICDIVIHPEYQG RGLGKQLVNKLIDASSGHSKIIMYAKPGKEGFYLGLGFKFMTTAMAIFQNQPLAVKSGVLK
Sequences:
>Translated_141_residues MEFTWSSNFNEIDWNELSELFRIAPLGQKSAKHLELVFNSSLFKFIVMDSGKLIGAGRALADGADCAYICDIVIHPEYQG RGLGKQLVNKLIDASSGHSKIIMYAKPGKEGFYLGLGFKFMTTAMAIFQNQPLAVKSGVLK >Mature_141_residues MEFTWSSNFNEIDWNELSELFRIAPLGQKSAKHLELVFNSSLFKFIVMDSGKLIGAGRALADGADCAYICDIVIHPEYQG RGLGKQLVNKLIDASSGHSKIIMYAKPGKEGFYLGLGFKFMTTAMAIFQNQPLAVKSGVLK
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15553; Mature: 15553
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFTWSSNFNEIDWNELSELFRIAPLGQKSAKHLELVFNSSLFKFIVMDSGKLIGAGRAL CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHEEEEECCCEEEEEEECCCCEEECCCCC ADGADCAYICDIVIHPEYQGRGLGKQLVNKLIDASSGHSKIIMYAKPGKEGFYLGLGFKF CCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECHHH MTTAMAIFQNQPLAVKSGVLK HHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MEFTWSSNFNEIDWNELSELFRIAPLGQKSAKHLELVFNSSLFKFIVMDSGKLIGAGRAL CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCHHEEEEECCCEEEEEEECCCCEEECCCCC ADGADCAYICDIVIHPEYQGRGLGKQLVNKLIDASSGHSKIIMYAKPGKEGFYLGLGFKF CCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECHHH MTTAMAIFQNQPLAVKSGVLK HHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA