Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945622
Identifier: 119945622
GI number: 119945622
Start: 2358769
End: 2359305
Strand: Reverse
Name: 119945622
Synonym: Ping_1932
Alternate gene names: NA
Gene position: 2359305-2358769 (Counterclockwise)
Preceding gene: 119945623
Following gene: 119945621
Centisome position: 51.74
GC content: 39.85
Gene sequence:
>537_bases ATGCTTAGATTTGAGCACTGCAATGTTAAAACCTGTGCCCATGAGTTACTTGCCTTAGGTAATGACAACATGAAGATGTG GTACATGTTTGACTGGTTAACTAAACATGATGAACTGCGCTATGGTATTCAGGCCGAAATCATTAAACTTTATGCCGATG ATCAGTTGGTTGGTTATGGTCTCCTTGAAAATTACGAAGCCTCTCCTGATAAAATTGTTCATCATCAAAGTATTACATAT CAGGATTTAGGGGTTATTCATTTCGTTACTGTCCATAAACATCGTAATAAAGGTTATGCCACCTTGCTGGCAAATGCTTT GTATAAAGATATTATTGAACCAATGTTGGCGCGTCATCGCGATGTGCATGCTTATGTGGTTGCCACTGGCCGCGCAGTCC CGTTGATGGAGCGTACTGACATCCCATCTATTAATCTGCTTAAGCAATTTTATTCGGAAGTCTCTTTTCAAGTGAAAGTG GTGGATTACCTAAGGACACAACAAGAAAGTCTGAAAAGGCTAGATTTGGTGATCTAA
Upstream 100 bases:
>100_bases GCTCAAAAATATCTTTTATTATACCTCGGCTTAATTAGCTTAATTAGCTTAATTAGCTTAATTAGCTTAACTGGCTTACA AAAATTCAAAGAGGTTGTTG
Downstream 100 bases:
>100_bases TTTTTAAACTTCTGAAATAAAAAACTAAGCTCGTAGGTTGTGCTCCGCGCACTTATTTTCACTGCTTGCAGTGTATAGAA TTCACCTTAACGATAACTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MLRFEHCNVKTCAHELLALGNDNMKMWYMFDWLTKHDELRYGIQAEIIKLYADDQLVGYGLLENYEASPDKIVHHQSITY QDLGVIHFVTVHKHRNKGYATLLANALYKDIIEPMLARHRDVHAYVVATGRAVPLMERTDIPSINLLKQFYSEVSFQVKV VDYLRTQQESLKRLDLVI
Sequences:
>Translated_178_residues MLRFEHCNVKTCAHELLALGNDNMKMWYMFDWLTKHDELRYGIQAEIIKLYADDQLVGYGLLENYEASPDKIVHHQSITY QDLGVIHFVTVHKHRNKGYATLLANALYKDIIEPMLARHRDVHAYVVATGRAVPLMERTDIPSINLLKQFYSEVSFQVKV VDYLRTQQESLKRLDLVI >Mature_178_residues MLRFEHCNVKTCAHELLALGNDNMKMWYMFDWLTKHDELRYGIQAEIIKLYADDQLVGYGLLENYEASPDKIVHHQSITY QDLGVIHFVTVHKHRNKGYATLLANALYKDIIEPMLARHRDVHAYVVATGRAVPLMERTDIPSINLLKQFYSEVSFQVKV VDYLRTQQESLKRLDLVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20791; Mature: 20791
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRFEHCNVKTCAHELLALGNDNMKMWYMFDWLTKHDELRYGIQAEIIKLYADDQLVGYG CCEECCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHCCHHEEEEEEEECCCEEECH LLENYEASPDKIVHHQSITYQDLGVIHFVTVHKHRNKGYATLLANALYKDIIEPMLARHR HHCCCCCCCCCEEECCCCCHHHCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC DVHAYVVATGRAVPLMERTDIPSINLLKQFYSEVSFQVKVVDYLRTQQESLKRLDLVI CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLRFEHCNVKTCAHELLALGNDNMKMWYMFDWLTKHDELRYGIQAEIIKLYADDQLVGYG CCEECCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHCCHHEEEEEEEECCCEEECH LLENYEASPDKIVHHQSITYQDLGVIHFVTVHKHRNKGYATLLANALYKDIIEPMLARHR HHCCCCCCCCCEEECCCCCHHHCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC DVHAYVVATGRAVPLMERTDIPSINLLKQFYSEVSFQVKVVDYLRTQQESLKRLDLVI CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA