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The map label for this gene is 119945585

Identifier: 119945585

GI number: 119945585

Start: 2296895

End: 2297749

Strand: Reverse

Name: 119945585

Synonym: Ping_1890

Alternate gene names: NA

Gene position: 2297749-2296895 (Counterclockwise)

Preceding gene: 119945586

Following gene: 119945582

Centisome position: 50.39

GC content: 33.8

Gene sequence:

>855_bases
ATGATTGAGACATTCTCATTTGTTAATTTAACTGCAACGAGCATTTTCCATACGCTAATGACGAATAAAATTGTATTAAC
CATCAGTTTAATTTTATTTGTTATGCTGAGTAAATTTTTTCTTGTAAAGTTAATCAATAAAAAAGAAAAACAAAATAAAC
GCTTAAAAATAAATATGCTGGGCAATGCAGTCACGGTATTTATTTTTATTGGTGTTTTTAATATTTGGGCTGTTGAATTT
CAAAAATTTGCCATTTCTATTGCTGCATTTACCGTCGCTATTGTGATTGCAACAAGAGAGTTTATTCAGTGTTTTATTGG
ATTTGTGTACATTACTTCCAGCCGCCCCTTTCGCATTGGTGACTGGATACAAGTTGGTGAGGACTATGGCGAGGTGCATT
CAACTGACTGGGCTAAACTAACCTTATTAGAAGTCGATATTGATGCCTATGAATATACCGGTAAAACACTTTATTTACCC
AACAGTAAGTTAATCACCTCTTCAATTAAAAATTTAAATTTTTTAAAGCGCTATGCGATGCATCATTTCACTATTACTCG
CGATTCAACAGTAAACCCATTTGTTTTTTTAGATCAATTATATGTAAAAGCTTATGAGTATTGTGCTGATTTTAACGATG
TGGCCATACGTTATAATCAGATAATTGAAAGCCGTTTAGATGTAAATATTGCAGGACCTGATCCTAAAATACAAGTAGCG
ACGTCAGAGATCGGAGACACTCAAGTCTTATTTACTATTTTTTGCCCGACAGACCGTGCAATGGCGATAGAGCAAAGCAT
CACGGCTGATTTTATGTCGTTTTGGTTTAAACAGAAACGATTAATGGCAACATAA

Upstream 100 bases:

>100_bases
ATTTTATTTGTCTTAAATGAACTATCCTAAAAGCTAAAATTAATTAATGCAAAAATAAACGTCACTTATACATTTCGACA
ACTTAAAGGTATTACTAATA

Downstream 100 bases:

>100_bases
TACTCACCTTAAATTAAAAAAGGGTAAACCTGCAAAGGTTTACCCTTTTTTTTTAATATTAAATGAGCTTTACATGGGCG
CTTAAATATTTAGTCACTCG

Product: MscS mechanosensitive ion channel

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel; Integral Membrane Protein; Membrane Associated Protein; Mechanosensitive Ion Channel MscS; MscS Mechanosensitive Ion Channel Protein; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MIETFSFVNLTATSIFHTLMTNKIVLTISLILFVMLSKFFLVKLINKKEKQNKRLKINMLGNAVTVFIFIGVFNIWAVEF
QKFAISIAAFTVAIVIATREFIQCFIGFVYITSSRPFRIGDWIQVGEDYGEVHSTDWAKLTLLEVDIDAYEYTGKTLYLP
NSKLITSSIKNLNFLKRYAMHHFTITRDSTVNPFVFLDQLYVKAYEYCADFNDVAIRYNQIIESRLDVNIAGPDPKIQVA
TSEIGDTQVLFTIFCPTDRAMAIEQSITADFMSFWFKQKRLMAT

Sequences:

>Translated_284_residues
MIETFSFVNLTATSIFHTLMTNKIVLTISLILFVMLSKFFLVKLINKKEKQNKRLKINMLGNAVTVFIFIGVFNIWAVEF
QKFAISIAAFTVAIVIATREFIQCFIGFVYITSSRPFRIGDWIQVGEDYGEVHSTDWAKLTLLEVDIDAYEYTGKTLYLP
NSKLITSSIKNLNFLKRYAMHHFTITRDSTVNPFVFLDQLYVKAYEYCADFNDVAIRYNQIIESRLDVNIAGPDPKIQVA
TSEIGDTQVLFTIFCPTDRAMAIEQSITADFMSFWFKQKRLMAT
>Mature_284_residues
MIETFSFVNLTATSIFHTLMTNKIVLTISLILFVMLSKFFLVKLINKKEKQNKRLKINMLGNAVTVFIFIGVFNIWAVEF
QKFAISIAAFTVAIVIATREFIQCFIGFVYITSSRPFRIGDWIQVGEDYGEVHSTDWAKLTLLEVDIDAYEYTGKTLYLP
NSKLITSSIKNLNFLKRYAMHHFTITRDSTVNPFVFLDQLYVKAYEYCADFNDVAIRYNQIIESRLDVNIAGPDPKIQVA
TSEIGDTQVLFTIFCPTDRAMAIEQSITADFMSFWFKQKRLMAT

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32681; Mature: 32681

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETFSFVNLTATSIFHTLMTNKIVLTISLILFVMLSKFFLVKLINKKEKQNKRLKINML
CCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
GNAVTVFIFIGVFNIWAVEFQKFAISIAAFTVAIVIATREFIQCFIGFVYITSSRPFRIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECC
DWIQVGEDYGEVHSTDWAKLTLLEVDIDAYEYTGKTLYLPNSKLITSSIKNLNFLKRYAM
HHHHHCCHHHHCCCCCCEEEEEEEEECCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHH
HHFTITRDSTVNPFVFLDQLYVKAYEYCADFNDVAIRYNQIIESRLDVNIAGPDPKIQVA
HHEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCCEEEE
TSEIGDTQVLFTIFCPTDRAMAIEQSITADFMSFWFKQKRLMAT
ECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIETFSFVNLTATSIFHTLMTNKIVLTISLILFVMLSKFFLVKLINKKEKQNKRLKINML
CCCEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
GNAVTVFIFIGVFNIWAVEFQKFAISIAAFTVAIVIATREFIQCFIGFVYITSSRPFRIG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEECC
DWIQVGEDYGEVHSTDWAKLTLLEVDIDAYEYTGKTLYLPNSKLITSSIKNLNFLKRYAM
HHHHHCCHHHHCCCCCCEEEEEEEEECCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHH
HHFTITRDSTVNPFVFLDQLYVKAYEYCADFNDVAIRYNQIIESRLDVNIAGPDPKIQVA
HHEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEECCCCCCEEEE
TSEIGDTQVLFTIFCPTDRAMAIEQSITADFMSFWFKQKRLMAT
ECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA