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The map label for this gene is aaeR [H]

Identifier: 119945582

GI number: 119945582

Start: 2292368

End: 2293294

Strand: Reverse

Name: aaeR [H]

Synonym: Ping_1887

Alternate gene names: 119945582

Gene position: 2293294-2292368 (Counterclockwise)

Preceding gene: 119945585

Following gene: 119945581

Centisome position: 50.3

GC content: 39.7

Gene sequence:

>927_bases
TTGAATAAAACATCGATAATTCCTAAGCCGCTCGCTGAATATGATTTACGCTTGTTACGTATTTTTGTTTCAGTTGTAGA
TCATGGGGGGTTTTCGGCTGCGGAATCAGCCCTTGGTATTACCCGCTCGACGATCAGTATTCATATGTCAAATTTAGAAG
AGCGCATGAAGCTCAAACTATGTTTACGGGGGCGAGGTGGATTTTCGCTCACGGAAGACGGGCAAACAATCTACCGCGCA
GTGATAAATTTATTTGAATCGCTGAATGATTTCTCACTCTTGGTGGGCACTTTAAGCAAAGAGCTAAATGGTGAGTTGGT
CATTTTGTGCGACGACCAGTTAAACCGTTCCAGACAAAATAAACTCGCTGAAGTCGTGCAACTTATTCATAAAAACTCTC
CAAACCTGCACCTTGTTTTAGACGGTGAGCCAATCTCTAATATTGAAAAATCATTGTTAAAAGATAAAGCACATATCGGT
TTGTTCCCTGATTACCAGCATATAGAAGGGCTGCATTACCAGCACCTGATGAGTGAAGCTGTGTATCTTTGCTGCGCTAA
AAAACATCCTTTTTTTAATAAAGTCGATACGTTAATCAGTCCAGCGGAACTCGCCAGTGTGCCCGCTATTCATCCCGGTA
TTGATATCGATTCATTAGGTATTGAGCAGCTTAAAAAATTAAATTTGGCGGCCAAGTCTTACCAATTTGATACTCGAAAA
GCGATGATTTTATCGGGTTGTTATATCGGATTTATGCCTCAAAGTTATATTCAGCATGAGCTAAATCACGGAGAAATAAG
AATTATTCAACCCAGCCAATTGACCTATCCATTTAATTTATCACTGGTTGCAAAAAAATCGCCCAGAGAGGCGAATAAAG
TGAAATTATTAACCGATATATTTAATCGTGTTTTTGATCCCCAATAG

Upstream 100 bases:

>100_bases
TGCAGGTTTTTTAACTTGATTTATATTTGTCTATTGAATAACAATATCAACTGATGTTAAATACAAAACATTCAACAATA
AGTTTGAGGAAAGTAAAACA

Downstream 100 bases:

>100_bases
TTACGTTTTTAACTAAGACTCTGATTACCTGTTAGCCTTATTGGTGATCTTTTTACATAATATGACCGTATCGTCTGTAC
AGACAGTAAATTAAAAATAA

Product: transcriptional regulator of LysR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MNKTSIIPKPLAEYDLRLLRIFVSVVDHGGFSAAESALGITRSTISIHMSNLEERMKLKLCLRGRGGFSLTEDGQTIYRA
VINLFESLNDFSLLVGTLSKELNGELVILCDDQLNRSRQNKLAEVVQLIHKNSPNLHLVLDGEPISNIEKSLLKDKAHIG
LFPDYQHIEGLHYQHLMSEAVYLCCAKKHPFFNKVDTLISPAELASVPAIHPGIDIDSLGIEQLKKLNLAAKSYQFDTRK
AMILSGCYIGFMPQSYIQHELNHGEIRIIQPSQLTYPFNLSLVAKKSPREANKVKLLTDIFNRVFDPQ

Sequences:

>Translated_308_residues
MNKTSIIPKPLAEYDLRLLRIFVSVVDHGGFSAAESALGITRSTISIHMSNLEERMKLKLCLRGRGGFSLTEDGQTIYRA
VINLFESLNDFSLLVGTLSKELNGELVILCDDQLNRSRQNKLAEVVQLIHKNSPNLHLVLDGEPISNIEKSLLKDKAHIG
LFPDYQHIEGLHYQHLMSEAVYLCCAKKHPFFNKVDTLISPAELASVPAIHPGIDIDSLGIEQLKKLNLAAKSYQFDTRK
AMILSGCYIGFMPQSYIQHELNHGEIRIIQPSQLTYPFNLSLVAKKSPREANKVKLLTDIFNRVFDPQ
>Mature_308_residues
MNKTSIIPKPLAEYDLRLLRIFVSVVDHGGFSAAESALGITRSTISIHMSNLEERMKLKLCLRGRGGFSLTEDGQTIYRA
VINLFESLNDFSLLVGTLSKELNGELVILCDDQLNRSRQNKLAEVVQLIHKNSPNLHLVLDGEPISNIEKSLLKDKAHIG
LFPDYQHIEGLHYQHLMSEAVYLCCAKKHPFFNKVDTLISPAELASVPAIHPGIDIDSLGIEQLKKLNLAAKSYQFDTRK
AMILSGCYIGFMPQSYIQHELNHGEIRIIQPSQLTYPFNLSLVAKKSPREANKVKLLTDIFNRVFDPQ

Specific function: Activates transcription of the aaeXAB operon [H]

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789639, Length=302, Percent_Identity=23.841059602649, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34634; Mature: 34634

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTSIIPKPLAEYDLRLLRIFVSVVDHGGFSAAESALGITRSTISIHMSNLEERMKLKL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHEEHHHHHHHHHHHH
CLRGRGGFSLTEDGQTIYRAVINLFESLNDFSLLVGTLSKELNGELVILCDDQLNRSRQN
EEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHCHHHHH
KLAEVVQLIHKNSPNLHLVLDGEPISNIEKSLLKDKAHIGLFPDYQHIEGLHYQHLMSEA
HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHH
VYLCCAKKHPFFNKVDTLISPAELASVPAIHPGIDIDSLGIEQLKKLNLAAKSYQFDTRK
HHHHHCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH
AMILSGCYIGFMPQSYIQHELNHGEIRIIQPSQLTYPFNLSLVAKKSPREANKVKLLTDI
HHHHHCCHHCCCCHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
FNRVFDPQ
HHHHCCCC
>Mature Secondary Structure
MNKTSIIPKPLAEYDLRLLRIFVSVVDHGGFSAAESALGITRSTISIHMSNLEERMKLKL
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHEEHHHHHHHHHHHH
CLRGRGGFSLTEDGQTIYRAVINLFESLNDFSLLVGTLSKELNGELVILCDDQLNRSRQN
EEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHCHHHHH
KLAEVVQLIHKNSPNLHLVLDGEPISNIEKSLLKDKAHIGLFPDYQHIEGLHYQHLMSEA
HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHH
VYLCCAKKHPFFNKVDTLISPAELASVPAIHPGIDIDSLGIEQLKKLNLAAKSYQFDTRK
HHHHHCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHH
AMILSGCYIGFMPQSYIQHELNHGEIRIIQPSQLTYPFNLSLVAKKSPREANKVKLLTDI
HHHHHCCHHCCCCHHHHHHCCCCCEEEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHH
FNRVFDPQ
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]