Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945577
Identifier: 119945577
GI number: 119945577
Start: 2287158
End: 2288039
Strand: Reverse
Name: 119945577
Synonym: Ping_1882
Alternate gene names: NA
Gene position: 2288039-2287158 (Counterclockwise)
Preceding gene: 119945581
Following gene: 119945569
Centisome position: 50.18
GC content: 36.51
Gene sequence:
>882_bases ATGACTAGTCAATCGATCAACAGAATAAAGTGCAAAGCAATCAACAGAATAAAGTGCAAAGCAATCATCAGCATTAAAGA CCAGTCGTTAAACGTTAACGCTCTTTTTATTGCTTTAGTGATTATTATAGGGGCTTTTTTAATGAGTCCGGTCAATGCAG ATCAGCTAAAAACAACCCAATCAACGGTTTCTTATGGGGTATTATCAGCGGCAATAAACAATCAAATGCGCTTAAATATA ATTAACACCAATTATAGCTCTGTCTTTTCAGACCAGCTAATAGGCAAAGCAACGGGAAAAAGCCGGGATGAGCAAATAAT ATTTCAAGATAGCTTATTATTATACCGATCTTATGCGCCAGAATTTACTATCTACAATGCCTCTACCAGACTGCATGATG ATCTTGATTCTGATGGTTACTATCAAACATTTAGTCTCGTTTTTGACGCAGATATCTACAGTTATGACGGTTATGATAGC AGCATGGTGTATGCCCGATTATATTTAAGTGAAAATGGTGGCCCTTGGGTCAATTACTACACTACGGATGATTTTATTAT TCACAGTGACAGTGATCAAGATGAATACGAGATCATTACTAGCTTTGCGTCCGGATATAACACGAACAGCTACGATCTAT TAATTGATTTATACCAAGTGGGTTATGATGGCATCGTTGCGACCTACAGCTCGAATGATAATCAAGCGCTTTACGATTTT CCATTAGAAAGCGGCGATTATGATCTAGTTTATGACGATAGTGTTTATGTTTACCAAGGCGGCAGTTTCTCCTCATTGTT GTTAATTATTTTATTTTTATTGTTTGCGGGCCGACTCTTAAGTCATCGTTTTAACATGCTAAATTCACCTTATAAAAAAT AA
Upstream 100 bases:
>100_bases TGGATGTGCTTAAAACCAGATGACTTTTTCACTGTTCAGTTTAGGTTCATATTCAATAGGGTTTAATAGTCATTAATAAC CCTATCAATACGAGTAAGCT
Downstream 100 bases:
>100_bases AGAAAGTGTGTAGATATAAAAATAAAATAGACCAAATTAATGTTATCAATCTGGGTTTTATCTTTAAAAGACAACTTTTA AAGAGGATAAGCATCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTSQSINRIKCKAINRIKCKAIISIKDQSLNVNALFIALVIIIGAFLMSPVNADQLKTTQSTVSYGVLSAAINNQMRLNI INTNYSSVFSDQLIGKATGKSRDEQIIFQDSLLLYRSYAPEFTIYNASTRLHDDLDSDGYYQTFSLVFDADIYSYDGYDS SMVYARLYLSENGGPWVNYYTTDDFIIHSDSDQDEYEIITSFASGYNTNSYDLLIDLYQVGYDGIVATYSSNDNQALYDF PLESGDYDLVYDDSVYVYQGGSFSSLLLIILFLLFAGRLLSHRFNMLNSPYKK
Sequences:
>Translated_293_residues MTSQSINRIKCKAINRIKCKAIISIKDQSLNVNALFIALVIIIGAFLMSPVNADQLKTTQSTVSYGVLSAAINNQMRLNI INTNYSSVFSDQLIGKATGKSRDEQIIFQDSLLLYRSYAPEFTIYNASTRLHDDLDSDGYYQTFSLVFDADIYSYDGYDS SMVYARLYLSENGGPWVNYYTTDDFIIHSDSDQDEYEIITSFASGYNTNSYDLLIDLYQVGYDGIVATYSSNDNQALYDF PLESGDYDLVYDDSVYVYQGGSFSSLLLIILFLLFAGRLLSHRFNMLNSPYKK >Mature_292_residues TSQSINRIKCKAINRIKCKAIISIKDQSLNVNALFIALVIIIGAFLMSPVNADQLKTTQSTVSYGVLSAAINNQMRLNII NTNYSSVFSDQLIGKATGKSRDEQIIFQDSLLLYRSYAPEFTIYNASTRLHDDLDSDGYYQTFSLVFDADIYSYDGYDSS MVYARLYLSENGGPWVNYYTTDDFIIHSDSDQDEYEIITSFASGYNTNSYDLLIDLYQVGYDGIVATYSSNDNQALYDFP LESGDYDLVYDDSVYVYQGGSFSSLLLIILFLLFAGRLLSHRFNMLNSPYKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33148; Mature: 33017
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQSINRIKCKAINRIKCKAIISIKDQSLNVNALFIALVIIIGAFLMSPVNADQLKTTQ CCCCCCCEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH STVSYGVLSAAINNQMRLNIINTNYSSVFSDQLIGKATGKSRDEQIIFQDSLLLYRSYAP HHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCC EFTIYNASTRLHDDLDSDGYYQTFSLVFDADIYSYDGYDSSMVYARLYLSENGGPWVNYY CEEEEECCCCCCCCCCCCCCEEEEEEEEECCEEEECCCCCCEEEEEEEEECCCCCEEEEE TTDDFIIHSDSDQDEYEIITSFASGYNTNSYDLLIDLYQVGYDGIVATYSSNDNQALYDF ECCCEEEECCCCCHHHHHHHHHHCCCCCCCHHEEEEEECCCCCCEEEEEECCCCCEEEEC PLESGDYDLVYDDSVYVYQGGSFSSLLLIILFLLFAGRLLSHRFNMLNSPYKK CCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TSQSINRIKCKAINRIKCKAIISIKDQSLNVNALFIALVIIIGAFLMSPVNADQLKTTQ CCCCCCEEEEECCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH STVSYGVLSAAINNQMRLNIINTNYSSVFSDQLIGKATGKSRDEQIIFQDSLLLYRSYAP HHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCEEEEECCEEEEECCCC EFTIYNASTRLHDDLDSDGYYQTFSLVFDADIYSYDGYDSSMVYARLYLSENGGPWVNYY CEEEEECCCCCCCCCCCCCCEEEEEEEEECCEEEECCCCCCEEEEEEEEECCCCCEEEEE TTDDFIIHSDSDQDEYEIITSFASGYNTNSYDLLIDLYQVGYDGIVATYSSNDNQALYDF ECCCEEEECCCCCHHHHHHHHHHCCCCCCCHHEEEEEECCCCCCEEEEEECCCCCEEEEC PLESGDYDLVYDDSVYVYQGGSFSSLLLIILFLLFAGRLLSHRFNMLNSPYKK CCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA