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The map label for this gene is yxeH [H]

Identifier: 119945569

GI number: 119945569

Start: 2278829

End: 2279635

Strand: Reverse

Name: yxeH [H]

Synonym: Ping_1874

Alternate gene names: 119945569

Gene position: 2279635-2278829 (Counterclockwise)

Preceding gene: 119945577

Following gene: 119945568

Centisome position: 50.0

GC content: 40.15

Gene sequence:

>807_bases
ATGTATAAACTTGTTGTATTAGATATGGATGGCACCCTATTAAATAGCCAAAAAGAGATTACAGAGAGAGTAAGAAAAGC
CATTAATGCAGCAAAGGACATCGGAATTAAAGTTGTACTGGCTTCAGGCAGACCTATTGATGGAATGTCACCTGCATTAG
AAGCCCTTAGTTTAACCACTGTTGATGATTATGTACTGACCTGTAACGCATCATTAACACTGAATGCTGGATCTAGAGAA
GTTATTCGCAGTGAATTTTTAACAGGTCAGGATGCGCGCGACTTATATCATTTATCTGTTAAATTAGGTGTTAATACGCA
TGCTTACTCTGCTAAACAGGGATTAATCACTCCTAAAACCAGCAAATATACTGAGCATGAAGCCGACATCAATCAAATTA
AAATTAATATCTGCGATTTTACAACACTCGAACCTGATCATGAAATGCTGAAAATCATGATGATTGACGAAGCGGATCTG
CTCACGGCGGCCATTAACCGCTTACCGGATAGTCTTCAGGAAAAATACAGCATGGCACAAAGCGCCCCCTTTTTTTATGA
ATTTATGAGCAAAAAAAGCGGCAAAGCAAATGGTGTCATAGCCCTTGCGGCTTACCTTGGTTTTACCCAAGAAGAGGTTA
TTTGTGTGGGTGATGCGGGTAATGATTTGGAAATGATTCAATACGCCGGTTTGGGTATTGCCATGGCGAATGCAACCGAT
GATGTAAAAGCCGTGGCTGATTACATCACCTTGAGTAACGATCAAGACGGTGTTGCACATGTTTTTGAAAAGTTCATATT
AGCCTAG

Upstream 100 bases:

>100_bases
TGATATTCCTACTTTATAGCCGATTTATTGTATAATCCTTTTTATTGCAGAAGCGACTGCAACGTTAATTTTCTATTTTA
GATAGTTTGGAACCTTATTA

Downstream 100 bases:

>100_bases
TAGGCAATTGAAGCTGTTCCCGTTTTACAATAAATATAGATTCAAACAGGTTAATATTTTCTCAGAAAATCTTAACCTGT
TATGTTATGCACAACAGATT

Product: Cof-like hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MYKLVVLDMDGTLLNSQKEITERVRKAINAAKDIGIKVVLASGRPIDGMSPALEALSLTTVDDYVLTCNASLTLNAGSRE
VIRSEFLTGQDARDLYHLSVKLGVNTHAYSAKQGLITPKTSKYTEHEADINQIKINICDFTTLEPDHEMLKIMMIDEADL
LTAAINRLPDSLQEKYSMAQSAPFFYEFMSKKSGKANGVIALAAYLGFTQEEVICVGDAGNDLEMIQYAGLGIAMANATD
DVKAVADYITLSNDQDGVAHVFEKFILA

Sequences:

>Translated_268_residues
MYKLVVLDMDGTLLNSQKEITERVRKAINAAKDIGIKVVLASGRPIDGMSPALEALSLTTVDDYVLTCNASLTLNAGSRE
VIRSEFLTGQDARDLYHLSVKLGVNTHAYSAKQGLITPKTSKYTEHEADINQIKINICDFTTLEPDHEMLKIMMIDEADL
LTAAINRLPDSLQEKYSMAQSAPFFYEFMSKKSGKANGVIALAAYLGFTQEEVICVGDAGNDLEMIQYAGLGIAMANATD
DVKAVADYITLSNDQDGVAHVFEKFILA
>Mature_268_residues
MYKLVVLDMDGTLLNSQKEITERVRKAINAAKDIGIKVVLASGRPIDGMSPALEALSLTTVDDYVLTCNASLTLNAGSRE
VIRSEFLTGQDARDLYHLSVKLGVNTHAYSAKQGLITPKTSKYTEHEADINQIKINICDFTTLEPDHEMLKIMMIDEADL
LTAAINRLPDSLQEKYSMAQSAPFFYEFMSKKSGKANGVIALAAYLGFTQEEVICVGDAGNDLEMIQYAGLGIAMANATD
DVKAVADYITLSNDQDGVAHVFEKFILA

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=271, Percent_Identity=39.8523985239852, Blast_Score=198, Evalue=4e-52,
Organism=Escherichia coli, GI87081741, Length=244, Percent_Identity=25.4098360655738, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150
- InterPro:   IPR006380 [H]

Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]

EC number: NA

Molecular weight: Translated: 29269; Mature: 29269

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKLVVLDMDGTLLNSQKEITERVRKAINAAKDIGIKVVLASGRPIDGMSPALEALSLTT
CEEEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHEEEE
VDDYVLTCNASLTLNAGSREVIRSEFLTGQDARDLYHLSVKLGVNTHAYSAKQGLITPKT
ECCEEEEECCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
SKYTEHEADINQIKINICDFTTLEPDHEMLKIMMIDEADLLTAAINRLPDSLQEKYSMAQ
CCCCCCCCCCEEEEEEEEECEECCCCHHEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHH
SAPFFYEFMSKKSGKANGVIALAAYLGFTQEEVICVGDAGNDLEMIQYAGLGIAMANATD
CCCHHHHHHHCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCHHHEEECCCEEEEECCCH
DVKAVADYITLSNDQDGVAHVFEKFILA
HHHHHHHHHEECCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MYKLVVLDMDGTLLNSQKEITERVRKAINAAKDIGIKVVLASGRPIDGMSPALEALSLTT
CEEEEEEECCCCEECCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHEEEE
VDDYVLTCNASLTLNAGSREVIRSEFLTGQDARDLYHLSVKLGVNTHAYSAKQGLITPKT
ECCEEEEECCEEEECCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC
SKYTEHEADINQIKINICDFTTLEPDHEMLKIMMIDEADLLTAAINRLPDSLQEKYSMAQ
CCCCCCCCCCEEEEEEEEECEECCCCHHEEEEEEECCHHHHHHHHHHCCHHHHHHHHHHH
SAPFFYEFMSKKSGKANGVIALAAYLGFTQEEVICVGDAGNDLEMIQYAGLGIAMANATD
CCCHHHHHHHCCCCCCCCEEEEEHHHCCCCCCEEEEECCCCCHHHEEECCCEEEEECCCH
DVKAVADYITLSNDQDGVAHVFEKFILA
HHHHHHHHHEECCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]