Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is ykoQ [H]
Identifier: 119945512
GI number: 119945512
Start: 2202843
End: 2203784
Strand: Reverse
Name: ykoQ [H]
Synonym: Ping_1816
Alternate gene names: 119945512
Gene position: 2203784-2202843 (Counterclockwise)
Preceding gene: 119945516
Following gene: 119945509
Centisome position: 48.33
GC content: 45.44
Gene sequence:
>942_bases ATGAGTAACAATATATTGGCAGCGCTAGAAAAGCGACTTGGTGCCACAGTTAGCAAACAGCGAGTTGCAAGCGAAGAGGC ACACACCGCGCAAGTCTTTGGATGGGGTCGTAATTTTTTTCATATTGAGAATTTCTACTCCGCACATTCAATTATCAAAA ATACCCTGCGCCTATGCTTGATGCATCAAAAAGGGCAGCGCAATGCCATAAATATTCAGCTTCGCCATAACAGTATTAAA CTCGAGCATCTGCATCCAGAGCTTCAAGATTTCACTCTTCTTCATCTTAGCGACATGCATCTTGATATGGATGCTCAAGC AACAATGGCATTGATGGAGCGAGTGAGAGAGGTAAATTATGATATCTGTGTTATGACCGGGGATTACCGTGCACGCACAT ACGGGGAGATAGATAAGGCAATGGCTGCCATGGCGCGATTGAGAGCACAACTAAAAAAACCTGTCTACGCTGTATTGGGC AACCATGACAGTATAACAATGGTGCCTGCCTTAGAGGAGATGGGAATTCAAGTGCTGGTCAATGAAAATACACTGATTAA ACGCGGGCAAGGGACGCTGTTTCTTGCTGGTATTGATGATGCGCATTACTTTTGTGCTGACGATATTCCTAAAGCGGCAA ACGGCATGACTGAGAGCATACCCGGTATCCTTTTGTCTCATACCCCCGCCGTCTATAAGCAGGCAGCAGAAGTGGGCTTT GATTTGCTTTTGTCCGGGCACACTCATGGTGGGCAAATATGTTTACCGGGTGGCATTCCTCTTATACTAGACTCTGACTG TCCGCGTTTTGTGGGCAAAGGGGCATGGCACTATCATAAATTGCAAGGTTATACATCGGTAGGCTCGGGAACTTCTATCG TGAATGTACGCATAAACTGCCTGCCTGAAATTACGCTACATACACTTATCTGCAAAGATTAA
Upstream 100 bases:
>100_bases CGATTCGCTACAATATATTTAATAAAACACCTAATTTATACTTCAGTGGTGGCTATTTATTGATGATCGCTTAACTCGCA GAAAAAGGAACTTTATCCAT
Downstream 100 bases:
>100_bases GCAATGCACTGAGCATTTTAGCTTGTTTTTTATTCTTATAGTAAACGCTGGAATTCAGTAAAGGGCAGATTCAACTTTGA AGTGCATAACCACTAAGCGG
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MSNNILAALEKRLGATVSKQRVASEEAHTAQVFGWGRNFFHIENFYSAHSIIKNTLRLCLMHQKGQRNAINIQLRHNSIK LEHLHPELQDFTLLHLSDMHLDMDAQATMALMERVREVNYDICVMTGDYRARTYGEIDKAMAAMARLRAQLKKPVYAVLG NHDSITMVPALEEMGIQVLVNENTLIKRGQGTLFLAGIDDAHYFCADDIPKAANGMTESIPGILLSHTPAVYKQAAEVGF DLLLSGHTHGGQICLPGGIPLILDSDCPRFVGKGAWHYHKLQGYTSVGSGTSIVNVRINCLPEITLHTLICKD
Sequences:
>Translated_313_residues MSNNILAALEKRLGATVSKQRVASEEAHTAQVFGWGRNFFHIENFYSAHSIIKNTLRLCLMHQKGQRNAINIQLRHNSIK LEHLHPELQDFTLLHLSDMHLDMDAQATMALMERVREVNYDICVMTGDYRARTYGEIDKAMAAMARLRAQLKKPVYAVLG NHDSITMVPALEEMGIQVLVNENTLIKRGQGTLFLAGIDDAHYFCADDIPKAANGMTESIPGILLSHTPAVYKQAAEVGF DLLLSGHTHGGQICLPGGIPLILDSDCPRFVGKGAWHYHKLQGYTSVGSGTSIVNVRINCLPEITLHTLICKD >Mature_312_residues SNNILAALEKRLGATVSKQRVASEEAHTAQVFGWGRNFFHIENFYSAHSIIKNTLRLCLMHQKGQRNAINIQLRHNSIKL EHLHPELQDFTLLHLSDMHLDMDAQATMALMERVREVNYDICVMTGDYRARTYGEIDKAMAAMARLRAQLKKPVYAVLGN HDSITMVPALEEMGIQVLVNENTLIKRGQGTLFLAGIDDAHYFCADDIPKAANGMTESIPGILLSHTPAVYKQAAEVGFD LLLSGHTHGGQICLPGGIPLILDSDCPRFVGKGAWHYHKLQGYTSVGSGTSIVNVRINCLPEITLHTLICKD
Specific function: Unknown
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081695, Length=239, Percent_Identity=27.1966527196653, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34709; Mature: 34577
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNILAALEKRLGATVSKQRVASEEAHTAQVFGWGRNFFHIENFYSAHSIIKNTLRLCL CCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH MHQKGQRNAINIQLRHNSIKLEHLHPELQDFTLLHLSDMHLDMDAQATMALMERVREVNY HHCCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHCCC DICVMTGDYRARTYGEIDKAMAAMARLRAQLKKPVYAVLGNHDSITMVPALEEMGIQVLV CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCHHHCCEEEEE NENTLIKRGQGTLFLAGIDDAHYFCADDIPKAANGMTESIPGILLSHTPAVYKQAAEVGF CCCEEEECCCCEEEEEECCCCCEEECCCCCHHHCCCHHHCCCEEECCCHHHHHHHHHCCE DLLLSGHTHGGQICLPGGIPLILDSDCPRFVGKGAWHYHKLQGYTSVGSGTSIVNVRINC EEEEECCCCCCEEEECCCCEEEECCCCCHHHCCCCCEEEEECCEEECCCCCEEEEEEEEE LPEITLHTLICKD ECCCEEEEEEECC >Mature Secondary Structure SNNILAALEKRLGATVSKQRVASEEAHTAQVFGWGRNFFHIENFYSAHSIIKNTLRLCL CCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHH MHQKGQRNAINIQLRHNSIKLEHLHPELQDFTLLHLSDMHLDMDAQATMALMERVREVNY HHCCCCCCEEEEEEECCEEEEEECCCCCCCEEEEEEECCEECCCHHHHHHHHHHHHHCCC DICVMTGDYRARTYGEIDKAMAAMARLRAQLKKPVYAVLGNHDSITMVPALEEMGIQVLV CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCHHHCCEEEEE NENTLIKRGQGTLFLAGIDDAHYFCADDIPKAANGMTESIPGILLSHTPAVYKQAAEVGF CCCEEEECCCCEEEEEECCCCCEEECCCCCHHHCCCHHHCCCEEECCCHHHHHHHHHCCE DLLLSGHTHGGQICLPGGIPLILDSDCPRFVGKGAWHYHKLQGYTSVGSGTSIVNVRINC EEEEECCCCCCEEEECCCCEEEECCCCCHHHCCCCCEEEEECCEEECCCCCEEEEEEEEE LPEITLHTLICKD ECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]