Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945516
Identifier: 119945516
GI number: 119945516
Start: 2208423
End: 2209184
Strand: Reverse
Name: 119945516
Synonym: Ping_1820
Alternate gene names: NA
Gene position: 2209184-2208423 (Counterclockwise)
Preceding gene: 119945517
Following gene: 119945512
Centisome position: 48.45
GC content: 35.83
Gene sequence:
>762_bases ATGACATCAAAACTGCAATATTCTTCTATTTATTTTCCTGTTTTTCTGGTGCTGTGGATTGGCTTATTTTTAGATAGTAA ACCCGTGGCAGAGGTGATCGAATACAGCCAATGGCTAACTAACGGTCTTGTTTTTTTGTGCTTTTTTTGGGTTTATAAAA AAGTAGCTAAGAAAATAAAGACCTTGATGATTTATGGCATAGGTCTGGCTTTTTTAGGTGAAATGTTTTTTGCAGTTCTG CTGGGTATGTACGAGTATCGATTAGAGAATATTCCTCTTTATGTCCCCTTAGGACATAGCTTGATCTACGCTGCCGTTTT TTACATTAATAAAGAGAAGGTTATTCAAGGAAAGAAAGAGCTTATTACATCCATTCTTTATTGTGCAATGATCATTTATT CAAGCCTTTGGCTGGCCTTAGCACAGGATATACTCGGCTTTTTATGCATGTTATTTGTAATCTTTTTTCTAAAGAAAAAA ATAGCTAACAAATTATTTTTCCTCATTATGTTTTTCATGATTGTATATTTAGAGCTTCTAGGTACCTATTACGCTTGCTG GGTATGGCCCGACACTTGGTTTTCTAAAATATCTTTTATCACCAGTGCTAATCCCCCCAGTGGCATCAGTGTGTTCTACT TTGGTTTTGATCTTGGCTGCCTTTGGATTTATAAAAAACTAAATGCCCAAAAGTGGCAAAGAATGAAATCCCTTCGGAAA ATACGAGCGACTAAAGGAGTGACTGCACAAGGAGTAAAATGA
Upstream 100 bases:
>100_bases AATAGAATAAAACATAAAAAAAAATTCACTGTCACGATTTAATTAAGCCTTAATATCATAATGTTAACGTTCCTTTTTCT CCTATATATGTATTTATAAT
Downstream 100 bases:
>100_bases AGTTGCCCAGTTGAATAGTCTCTGCACTTCGCATTCACTTGATCTTACCCGCAAAGCGTGAATTGATTCATTCTTTTATT CACCAGAATATCACCCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTSKLQYSSIYFPVFLVLWIGLFLDSKPVAEVIEYSQWLTNGLVFLCFFWVYKKVAKKIKTLMIYGIGLAFLGEMFFAVL LGMYEYRLENIPLYVPLGHSLIYAAVFYINKEKVIQGKKELITSILYCAMIIYSSLWLALAQDILGFLCMLFVIFFLKKK IANKLFFLIMFFMIVYLELLGTYYACWVWPDTWFSKISFITSANPPSGISVFYFGFDLGCLWIYKKLNAQKWQRMKSLRK IRATKGVTAQGVK
Sequences:
>Translated_253_residues MTSKLQYSSIYFPVFLVLWIGLFLDSKPVAEVIEYSQWLTNGLVFLCFFWVYKKVAKKIKTLMIYGIGLAFLGEMFFAVL LGMYEYRLENIPLYVPLGHSLIYAAVFYINKEKVIQGKKELITSILYCAMIIYSSLWLALAQDILGFLCMLFVIFFLKKK IANKLFFLIMFFMIVYLELLGTYYACWVWPDTWFSKISFITSANPPSGISVFYFGFDLGCLWIYKKLNAQKWQRMKSLRK IRATKGVTAQGVK >Mature_252_residues TSKLQYSSIYFPVFLVLWIGLFLDSKPVAEVIEYSQWLTNGLVFLCFFWVYKKVAKKIKTLMIYGIGLAFLGEMFFAVLL GMYEYRLENIPLYVPLGHSLIYAAVFYINKEKVIQGKKELITSILYCAMIIYSSLWLALAQDILGFLCMLFVIFFLKKKI ANKLFFLIMFFMIVYLELLGTYYACWVWPDTWFSKISFITSANPPSGISVFYFGFDLGCLWIYKKLNAQKWQRMKSLRKI RATKGVTAQGVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29514; Mature: 29383
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKLQYSSIYFPVFLVLWIGLFLDSKPVAEVIEYSQWLTNGLVFLCFFWVYKKVAKKIK CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLMIYGIGLAFLGEMFFAVLLGMYEYRLENIPLYVPLGHSLIYAAVFYINKEKVIQGKKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHCCHHH LITSILYCAMIIYSSLWLALAQDILGFLCMLFVIFFLKKKIANKLFFLIMFFMIVYLELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTYYACWVWPDTWFSKISFITSANPPSGISVFYFGFDLGCLWIYKKLNAQKWQRMKSLRK HHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH IRATKGVTAQGVK HHHHCCCCCCCCC >Mature Secondary Structure TSKLQYSSIYFPVFLVLWIGLFLDSKPVAEVIEYSQWLTNGLVFLCFFWVYKKVAKKIK CCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLMIYGIGLAFLGEMFFAVLLGMYEYRLENIPLYVPLGHSLIYAAVFYINKEKVIQGKKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHCCHHH LITSILYCAMIIYSSLWLALAQDILGFLCMLFVIFFLKKKIANKLFFLIMFFMIVYLELL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTYYACWVWPDTWFSKISFITSANPPSGISVFYFGFDLGCLWIYKKLNAQKWQRMKSLRK HHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH IRATKGVTAQGVK HHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA