Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945509
Identifier: 119945509
GI number: 119945509
Start: 2199596
End: 2200258
Strand: Reverse
Name: 119945509
Synonym: Ping_1813
Alternate gene names: NA
Gene position: 2200258-2199596 (Counterclockwise)
Preceding gene: 119945512
Following gene: 119945505
Centisome position: 48.26
GC content: 40.72
Gene sequence:
>663_bases ATGATTCAATTCTCCACTGAAATTTACAAACTGATTACCACCGCTTTAACTGAATTATCTGATTCTCATGATTCTGGTAG AACACCCCATAACCCGCTGAGTGAAGCACATTATTTAGGCGCTTGGATTACAACTGCCATGAAAAAGAAACGTTTTGACG CTATTGTTGCCCCTACTTTGCAGGTTTGGCAAAGACAAGCGCGCAGTCTTGGCAAAAACGCAGGACTAAAACGACAGTTT ACTTATTTAGAAAAGTGTTACAGCGAAGTGATGGATGAGCAAAAAGAGGTTCGCCCCGTCAATAAAAGCCAACTGGAAAA ACTTTTCGCCGGGCTTGAAGAAGATCAATGGTTGGTGACAACTGATTTACCGGTTGGGGAAAGACTTAACCGACACAGTG GCGGCAAAGAGTCATTAATCGTTTGTGCACAGCAACTGCTCGATTGTTTTGATGAGCAAGGAACGTTAATCAAGCCGATC TCTTTATATATCCGAGGTACTCTTCCCAAGATTATTGATCTTGCGTTCGCACAGGATCTGCTTTTACATAAAATAACCGA TTATAAATCTAAAGTGAAATATCACGGCGAGTTTATCGTTTATCCAAATAACGATGGCAGATCTTTACCTGAATTCCCTG AAAACAACAGCGAAAAATCTTAA
Upstream 100 bases:
>100_bases TATCCCTTTTCATTAAAAAATTGAATATTATATTTGTGATCCATTTGACTATATAATGCTTTAAAACTTCATTCGAATAG ATAAACCAATAAGGAATCAT
Downstream 100 bases:
>100_bases TTACTTCTTATTTGCAGCGGGTTAATTCGCGTTAACCTGCTGTTTTTCTGCCAGTAACTCAGCGGCAATTAATTGTAATA AAAAGGTTTCACGCTCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MIQFSTEIYKLITTALTELSDSHDSGRTPHNPLSEAHYLGAWITTAMKKKRFDAIVAPTLQVWQRQARSLGKNAGLKRQF TYLEKCYSEVMDEQKEVRPVNKSQLEKLFAGLEEDQWLVTTDLPVGERLNRHSGGKESLIVCAQQLLDCFDEQGTLIKPI SLYIRGTLPKIIDLAFAQDLLLHKITDYKSKVKYHGEFIVYPNNDGRSLPEFPENNSEKS
Sequences:
>Translated_220_residues MIQFSTEIYKLITTALTELSDSHDSGRTPHNPLSEAHYLGAWITTAMKKKRFDAIVAPTLQVWQRQARSLGKNAGLKRQF TYLEKCYSEVMDEQKEVRPVNKSQLEKLFAGLEEDQWLVTTDLPVGERLNRHSGGKESLIVCAQQLLDCFDEQGTLIKPI SLYIRGTLPKIIDLAFAQDLLLHKITDYKSKVKYHGEFIVYPNNDGRSLPEFPENNSEKS >Mature_220_residues MIQFSTEIYKLITTALTELSDSHDSGRTPHNPLSEAHYLGAWITTAMKKKRFDAIVAPTLQVWQRQARSLGKNAGLKRQF TYLEKCYSEVMDEQKEVRPVNKSQLEKLFAGLEEDQWLVTTDLPVGERLNRHSGGKESLIVCAQQLLDCFDEQGTLIKPI SLYIRGTLPKIIDLAFAQDLLLHKITDYKSKVKYHGEFIVYPNNDGRSLPEFPENNSEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25116; Mature: 25116
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQFSTEIYKLITTALTELSDSHDSGRTPHNPLSEAHYLGAWITTAMKKKRFDAIVAPTL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVWQRQARSLGKNAGLKRQFTYLEKCYSEVMDEQKEVRPVNKSQLEKLFAGLEEDQWLVT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEE TDLPVGERLNRHSGGKESLIVCAQQLLDCFDEQGTLIKPISLYIRGTLPKIIDLAFAQDL ECCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHHHHHHHHHHHH LLHKITDYKSKVKYHGEFIVYPNNDGRSLPEFPENNSEKS HHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIQFSTEIYKLITTALTELSDSHDSGRTPHNPLSEAHYLGAWITTAMKKKRFDAIVAPTL CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVWQRQARSLGKNAGLKRQFTYLEKCYSEVMDEQKEVRPVNKSQLEKLFAGLEEDQWLVT HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEE TDLPVGERLNRHSGGKESLIVCAQQLLDCFDEQGTLIKPISLYIRGTLPKIIDLAFAQDL ECCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCHHHHHHHHHHHHH LLHKITDYKSKVKYHGEFIVYPNNDGRSLPEFPENNSEKS HHHHHHHHHHHHEECCCEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA