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The map label for this gene is 119945488

Identifier: 119945488

GI number: 119945488

Start: 2175056

End: 2175586

Strand: Reverse

Name: 119945488

Synonym: Ping_1790

Alternate gene names: NA

Gene position: 2175586-2175056 (Counterclockwise)

Preceding gene: 119945489

Following gene: 119945487

Centisome position: 47.71

GC content: 33.15

Gene sequence:

>531_bases
ATGAATAAAAAATCTCAAATACTCACATTAGCAGAAAACAAAGTAAGGTCTGGCGGCTACGGTAATTTTAGCTTTAGAGA
GCTTGCCGATGAAATAGGCATTAAAAGCTCAAGTGTGCATTACTATTTTCGTACCAAAGCTGATTTAGCTGCAGAATTAG
CGCATCAGTATACCGATGTGTTTTTAGCATCACTAAATGATGAGAAAGCAAAGCAACAAGAGAGTAGTGCAATTAACCTC
TATATTAATATGTTCAAAGCCGCATTGGAAAAAGATAACCAAATGTGCTTATGTGGTTTATTAGGCGCACAGTTAGACGC
CTTACCAGAGCAAGTAAAAAGTGAAATTAAACGTTTTTTTGAATTGAATATAAACTGGTTACAACAAAGATATATTGAAG
AAAAAGACATGACAGCAGCAAGTGCCAAAGCTAAAGCTATTCATTTATTAGCCTCTTTAGAGGGCATAATGATTTTATCT
AAAGTATTAGATGATAAAACGGTTTTTGATAATATTCAATATTATACTTAA

Upstream 100 bases:

>100_bases
TAACATCAGCAGTAACATTGTCTGGTTATATAGCTAATACGGGTATTAAAGCTACTCAATAACTTCATTATTTACTTAAC
CTCTCACATAGCATTTATTT

Downstream 100 bases:

>100_bases
CAGCATATTCTTACAAAATATGCTATTCAGGCAATGTTATTAGACAATATTATTAGACAATATTTACTTAAGCTATGTGC
CATTCTTGTGGATCTGCCCC

Product: transcriptional regulator of TetR family protein

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; HTH-Type Protein SlmA; Transcriptional Regulator Protein TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator Of TetR Family Protein; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MNKKSQILTLAENKVRSGGYGNFSFRELADEIGIKSSSVHYYFRTKADLAAELAHQYTDVFLASLNDEKAKQQESSAINL
YINMFKAALEKDNQMCLCGLLGAQLDALPEQVKSEIKRFFELNINWLQQRYIEEKDMTAASAKAKAIHLLASLEGIMILS
KVLDDKTVFDNIQYYT

Sequences:

>Translated_176_residues
MNKKSQILTLAENKVRSGGYGNFSFRELADEIGIKSSSVHYYFRTKADLAAELAHQYTDVFLASLNDEKAKQQESSAINL
YINMFKAALEKDNQMCLCGLLGAQLDALPEQVKSEIKRFFELNINWLQQRYIEEKDMTAASAKAKAIHLLASLEGIMILS
KVLDDKTVFDNIQYYT
>Mature_176_residues
MNKKSQILTLAENKVRSGGYGNFSFRELADEIGIKSSSVHYYFRTKADLAAELAHQYTDVFLASLNDEKAKQQESSAINL
YINMFKAALEKDNQMCLCGLLGAQLDALPEQVKSEIKRFFELNINWLQQRYIEEKDMTAASAKAKAIHLLASLEGIMILS
KVLDDKTVFDNIQYYT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19959; Mature: 19959

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKSQILTLAENKVRSGGYGNFSFRELADEIGIKSSSVHYYFRTKADLAAELAHQYTDV
CCCCHHEEHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHH
FLASLNDEKAKQQESSAINLYINMFKAALEKDNQMCLCGLLGAQLDALPEQVKSEIKRFF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
ELNINWLQQRYIEEKDMTAASAKAKAIHLLASLEGIMILSKVLDDKTVFDNIQYYT
HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MNKKSQILTLAENKVRSGGYGNFSFRELADEIGIKSSSVHYYFRTKADLAAELAHQYTDV
CCCCHHEEHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHH
FLASLNDEKAKQQESSAINLYINMFKAALEKDNQMCLCGLLGAQLDALPEQVKSEIKRFF
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
ELNINWLQQRYIEEKDMTAASAKAKAIHLLASLEGIMILSKVLDDKTVFDNIQYYT
HCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA