Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945489
Identifier: 119945489
GI number: 119945489
Start: 2175785
End: 2176900
Strand: Reverse
Name: 119945489
Synonym: Ping_1791
Alternate gene names: NA
Gene position: 2176900-2175785 (Counterclockwise)
Preceding gene: 119945495
Following gene: 119945488
Centisome position: 47.74
GC content: 38.71
Gene sequence:
>1116_bases ATGAATAAAAAACGCGTAATTATTGTTGGTGGTGGATTAGCTGGTTTGTACACCGCGTTTCAGTTAGAGCAGTTAAATAT TCCCTATGTGCTTTTTGAAGCGAAAGATGTTTTTGGTGGGCGCATTCATAGTGAAAAGCCTAAGGGAAATAATGACGAAT CGTTATTTCATGATCTTGGCCCAACATGGATATTTCCGCATCATTATCGTATGAAAGCATTAGCGGCTAATTTGGAGCAA AATTTATTTCATCAACATATTGCCGGTGCGGTTGTTTATCATGAACATAGGAATATAGCACCTAAAATCATTAAAAATGG TCAAGGGCCTTTATTGCATCGTTTAGAAGGAGGTTTATATAAACTCATTTTGGCTTTACAAGCTAAGTTATCAAAACGTA ACTATCAGCTTAGTTGTCAAGTGGATAGTTTAATAAAGGTCAATGATACTTGGCAAGTAACAGTGAAAAATACAAAAGAT GCTTCGGTCGTTATTCACGAAACCGACAATTTAATGTTGGCCTTACCACCCAGACTTATCCATGAATACTTAACGCCTGC TCATTGGGCGAGTGAAGCGTTAACAAAAGCGTTAGTGGCTGTACCCACTTGGATGGCAAACCAAACAAAGTTTATAGCGA CTTATAATAAACCTTTTTGGCGAGACAATGGCTTGGCAGGACAAGCATTTAGTCGCGTTGGACCTATGATAGAAATTCAT GATGCCTCAGCCACAGATCAGCAGGGTTTTGCATTATTTGGTTTTATCGGACTTTCATCCCAAGACATAAAAAGTTTCTC TATTGAACATTTAAAAGCCCAGTGCATTAATCAGCTTAAATCATTGTTTGGCGAAGCAGCCCAGCACTATGAACAGTGTT ATTTAAAAAGTTGGGGCAACGATGTCCATGTTGCCACAGATAAAGACAGAGCAGAGCCACCGGCGCATCCTGATTTTTAT ATAAAGCGATTTTCTCAGGAGTTATCGTCATTAAACTTATATTTGGCAGGTAGTGAGTTTTCTGAGGAAGACGCTGGTTA CCTTGAAGGCGCGATTAACGCTGCTGATACAGCGATTAGTTTATTGAAAAAAGAAGTCTTGTTTAAAAGTCACTAA
Upstream 100 bases:
>100_bases CTTGTAGCTAAATGTAGCTTCTAGCGTGTTGTAAAATAACTTGCTATTAAATTGAACGCCAGTTAATATTTATCTATCAG TAGGTAGGTTTGAGGTGTTA
Downstream 100 bases:
>100_bases AAACGAACAAGCATCTTAGTGGTATCAATTTAGCGAAATTATTAAGTATTTGAATAAAATGACTTAGTCATTGATAATGC CTGAGATTATTGAGTAACTA
Product: amine oxidase
Products: NA
Alternate protein names: Amine Oxidase Family Flavin-Containing; Flavin Monoamine Oxidase Family Protein; Amine Oxidase Flavin-Containing; Monoamine Oxidase; Oxidoreductase Protein; FAD Dependent Oxidoreductase; Amine Oxidase B; Oxidoreductase; Amine Oxidase Protein; Flavin-Containing Monoamine Oxidase; Amine Oxidase Family Flavin-Containing Protein; Flavin Containing Amine Oxidoreductase; Secreted Flavin-Containing Amine Oxidoreductase; Flavin-Containing Protein; Putrescine Oxidase
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MNKKRVIIVGGGLAGLYTAFQLEQLNIPYVLFEAKDVFGGRIHSEKPKGNNDESLFHDLGPTWIFPHHYRMKALAANLEQ NLFHQHIAGAVVYHEHRNIAPKIIKNGQGPLLHRLEGGLYKLILALQAKLSKRNYQLSCQVDSLIKVNDTWQVTVKNTKD ASVVIHETDNLMLALPPRLIHEYLTPAHWASEALTKALVAVPTWMANQTKFIATYNKPFWRDNGLAGQAFSRVGPMIEIH DASATDQQGFALFGFIGLSSQDIKSFSIEHLKAQCINQLKSLFGEAAQHYEQCYLKSWGNDVHVATDKDRAEPPAHPDFY IKRFSQELSSLNLYLAGSEFSEEDAGYLEGAINAADTAISLLKKEVLFKSH
Sequences:
>Translated_371_residues MNKKRVIIVGGGLAGLYTAFQLEQLNIPYVLFEAKDVFGGRIHSEKPKGNNDESLFHDLGPTWIFPHHYRMKALAANLEQ NLFHQHIAGAVVYHEHRNIAPKIIKNGQGPLLHRLEGGLYKLILALQAKLSKRNYQLSCQVDSLIKVNDTWQVTVKNTKD ASVVIHETDNLMLALPPRLIHEYLTPAHWASEALTKALVAVPTWMANQTKFIATYNKPFWRDNGLAGQAFSRVGPMIEIH DASATDQQGFALFGFIGLSSQDIKSFSIEHLKAQCINQLKSLFGEAAQHYEQCYLKSWGNDVHVATDKDRAEPPAHPDFY IKRFSQELSSLNLYLAGSEFSEEDAGYLEGAINAADTAISLLKKEVLFKSH >Mature_371_residues MNKKRVIIVGGGLAGLYTAFQLEQLNIPYVLFEAKDVFGGRIHSEKPKGNNDESLFHDLGPTWIFPHHYRMKALAANLEQ NLFHQHIAGAVVYHEHRNIAPKIIKNGQGPLLHRLEGGLYKLILALQAKLSKRNYQLSCQVDSLIKVNDTWQVTVKNTKD ASVVIHETDNLMLALPPRLIHEYLTPAHWASEALTKALVAVPTWMANQTKFIATYNKPFWRDNGLAGQAFSRVGPMIEIH DASATDQQGFALFGFIGLSSQDIKSFSIEHLKAQCINQLKSLFGEAAQHYEQCYLKSWGNDVHVATDKDRAEPPAHPDFY IKRFSQELSSLNLYLAGSEFSEEDAGYLEGAINAADTAISLLKKEVLFKSH
Specific function: Unknown
COG id: COG1231
COG function: function code E; Monoamine oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41588; Mature: 41588
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKRVIIVGGGLAGLYTAFQLEQLNIPYVLFEAKDVFGGRIHSEKPKGNNDESLFHDLG CCCCEEEEEECCHHHHHHHHHHEECCCCEEEEECCHHCCCCCCCCCCCCCCCHHHHHHCC PTWIFPHHYRMKALAANLEQNLFHQHIAGAVVYHEHRNIAPKIIKNGQGPLLHRLEGGLY CCEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCCCCCHHHHHHHHHH KLILALQAKLSKRNYQLSCQVDSLIKVNDTWQVTVKNTKDASVVIHETDNLMLALPPRLI HHHHHHHHHHHCCCEEEEEEECCEEEECCEEEEEEECCCCCEEEEEECCCEEEEECHHHH HEYLTPAHWASEALTKALVAVPTWMANQTKFIATYNKPFWRDNGLAGQAFSRVGPMIEIH HHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCEEEEE DASATDQQGFALFGFIGLSSQDIKSFSIEHLKAQCINQLKSLFGEAAQHYEQCYLKSWGN CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DVHVATDKDRAEPPAHPDFYIKRFSQELSSLNLYLAGSEFSEEDAGYLEGAINAADTAIS EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHCCHHHHHHHH LLKKEVLFKSH HHHHHHHHCCC >Mature Secondary Structure MNKKRVIIVGGGLAGLYTAFQLEQLNIPYVLFEAKDVFGGRIHSEKPKGNNDESLFHDLG CCCCEEEEEECCHHHHHHHHHHEECCCCEEEEECCHHCCCCCCCCCCCCCCCHHHHHHCC PTWIFPHHYRMKALAANLEQNLFHQHIAGAVVYHEHRNIAPKIIKNGQGPLLHRLEGGLY CCEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHCCCCCCHHHHHHHHHH KLILALQAKLSKRNYQLSCQVDSLIKVNDTWQVTVKNTKDASVVIHETDNLMLALPPRLI HHHHHHHHHHHCCCEEEEEEECCEEEECCEEEEEEECCCCCEEEEEECCCEEEEECHHHH HEYLTPAHWASEALTKALVAVPTWMANQTKFIATYNKPFWRDNGLAGQAFSRVGPMIEIH HHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCEEEEE DASATDQQGFALFGFIGLSSQDIKSFSIEHLKAQCINQLKSLFGEAAQHYEQCYLKSWGN CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DVHVATDKDRAEPPAHPDFYIKRFSQELSSLNLYLAGSEFSEEDAGYLEGAINAADTAIS EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEECCCCCCCCCCHHHHCCHHHHHHHH LLKKEVLFKSH HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA