Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is 119945403
Identifier: 119945403
GI number: 119945403
Start: 2069522
End: 2070232
Strand: Reverse
Name: 119945403
Synonym: Ping_1694
Alternate gene names: NA
Gene position: 2070232-2069522 (Counterclockwise)
Preceding gene: 119945409
Following gene: 119945399
Centisome position: 45.4
GC content: 38.96
Gene sequence:
>711_bases ATGAGCCGCAATAAACTACTGCGTTACCAACAAACCTCTGTCGCTAAGGTCTTTGAAAAAGAAACAGCGCTTATTGATCA AATCCAAACTGGTGAGCTCAAGCAGTGTTTAATGCTTTGGCAAGCTAAAGAAGCTACCTTGATATTACCTGCAGGTAAGA AATGGCCAGAATCAGACGCACTTAAAGCGGGTTTGCTAGCGGATGAATGGCTGTTACATTCACGTAAAACGGGTGGAGCT CCAGTGCCGCAATGTCCAGGTATTATAAATTTATCTCACCTTTATCTTTGGTCAAAAGATACACCGTATTCAATTCCCCA AGCCTACGAAAATCTATGTACAGTGTTACATGGTTTTTTTTATCAATTTAACTTGGTTAGCAAAGCACATGCGACAAAGT TCTCTTACTGTGATGGTGATTACAATATTAATATTAACGGTAAAAAAATAGTGGGTACAGCGCAGCGGGTGATATTAAAA AAAGGCGGTGGCAAGATAGTGTTAGCACAAGCTTTTATTCTTATTGACGTGTTATTAGATGAGATTATAAAACCGGTTAA CTTATGTTATCAACTATCTGATAAAACGGAGCGGGTACAAGCGCAGGTGCATACTGCACTTTTTGAACATATTACCGAGC GACCTACTATCGATCAGCTGTATCAGCAGTTAACTCAAGCTTTTGTTGATAGTGCTTTATATTCAGAATAA
Upstream 100 bases:
>100_bases TATACACTTACTAACTTCCTTGTTAAATTAACTTGGTGAATTATTATGATTTAGCGGTAAAATACTGACACTCAACATGA TACCCGTATAAGAAGTTAAT
Downstream 100 bases:
>100_bases AGTTGTAAATAAACTAATTGTTATTTATATGCTTCTTTTTAGCTGTGAGAGTCATGAGGGTCACCTTTCATTTTGCACAA TCAAAGACTCGAATGAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MSRNKLLRYQQTSVAKVFEKETALIDQIQTGELKQCLMLWQAKEATLILPAGKKWPESDALKAGLLADEWLLHSRKTGGA PVPQCPGIINLSHLYLWSKDTPYSIPQAYENLCTVLHGFFYQFNLVSKAHATKFSYCDGDYNININGKKIVGTAQRVILK KGGGKIVLAQAFILIDVLLDEIIKPVNLCYQLSDKTERVQAQVHTALFEHITERPTIDQLYQQLTQAFVDSALYSE
Sequences:
>Translated_236_residues MSRNKLLRYQQTSVAKVFEKETALIDQIQTGELKQCLMLWQAKEATLILPAGKKWPESDALKAGLLADEWLLHSRKTGGA PVPQCPGIINLSHLYLWSKDTPYSIPQAYENLCTVLHGFFYQFNLVSKAHATKFSYCDGDYNININGKKIVGTAQRVILK KGGGKIVLAQAFILIDVLLDEIIKPVNLCYQLSDKTERVQAQVHTALFEHITERPTIDQLYQQLTQAFVDSALYSE >Mature_235_residues SRNKLLRYQQTSVAKVFEKETALIDQIQTGELKQCLMLWQAKEATLILPAGKKWPESDALKAGLLADEWLLHSRKTGGAP VPQCPGIINLSHLYLWSKDTPYSIPQAYENLCTVLHGFFYQFNLVSKAHATKFSYCDGDYNININGKKIVGTAQRVILKK GGGKIVLAQAFILIDVLLDEIIKPVNLCYQLSDKTERVQAQVHTALFEHITERPTIDQLYQQLTQAFVDSALYSE
Specific function: Unknown
COG id: COG0095
COG function: function code H; Lipoate-protein ligase A
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26614; Mature: 26483
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRNKLLRYQQTSVAKVFEKETALIDQIQTGELKQCLMLWQAKEATLILPAGKKWPESDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHH LKAGLLADEWLLHSRKTGGAPVPQCPGIINLSHLYLWSKDTPYSIPQAYENLCTVLHGFF HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHEEEEECCCCCCCCHHHHHHHHHHHHHHH YQFNLVSKAHATKFSYCDGDYNININGKKIVGTAQRVILKKGGGKIVLAQAFILIDVLLD HHHHHHHHHHHCEEEEECCCEEEEECCCEEHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH EIIKPVNLCYQLSDKTERVQAQVHTALFEHITERPTIDQLYQQLTQAFVDSALYSE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRNKLLRYQQTSVAKVFEKETALIDQIQTGELKQCLMLWQAKEATLILPAGKKWPESDA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEECCCCCCCCHH LKAGLLADEWLLHSRKTGGAPVPQCPGIINLSHLYLWSKDTPYSIPQAYENLCTVLHGFF HHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHEEEEECCCCCCCCHHHHHHHHHHHHHHH YQFNLVSKAHATKFSYCDGDYNININGKKIVGTAQRVILKKGGGKIVLAQAFILIDVLLD HHHHHHHHHHHCEEEEECCCEEEEECCCEEHHHHHHHHHCCCCCEEEHHHHHHHHHHHHH EIIKPVNLCYQLSDKTERVQAQVHTALFEHITERPTIDQLYQQLTQAFVDSALYSE HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA