Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is hisB [H]
Identifier: 119945366
GI number: 119945366
Start: 2010821
End: 2011891
Strand: Reverse
Name: hisB [H]
Synonym: Ping_1654
Alternate gene names: 119945366
Gene position: 2011891-2010821 (Counterclockwise)
Preceding gene: 119945367
Following gene: 119945365
Centisome position: 44.12
GC content: 41.64
Gene sequence:
>1071_bases ATGAGCAAACAAAAATTTCTATTCATCGATCGTGATGGTACTTTAATTGATGAGCCCATCAGCGACAAACAGGTTGATAG TTTAGAAAAATTAATTTTTGAACCCTATGTCATCCCGAGCTTACTGACATTACAAGATGCAGGTTATATTCTGGTGATTG TATCAAACCAGGATGGTCTGGGAACCGACAGTTATCCGCAGTCTGATTTTGATATTCCGCAGAATAAAATGATGGAAATT TTTGCATCTCAAGGTGTAAAATTTGAAGCCACTCTGCTTTGTCCGCACTTCACTACGGATAACTGCAGCTGCCGTAAACC CCATTTAGGGATAGTCAGTGAATACCTGAAATCAGGACGCATCGATTTTGCACATTCCTATGTTATTGGCGATCGTATTA CCGATATCCAGCTTGCTGACAATATGGGCATCACCGGCATTATGTACAACAGAGAAACCGGTGGCTGGAATGCGATTGTT AAACAGTTAACCAGCCAAGGGCGTATTGCCTCCGTTACCCGTACAACCAAAGAAACTGATATTAATGTCACCTTAGATTT AGATCATACGGGTGAAAACCATATTGATACCGGCATGGGCTTCTTTGACCATATGTTAGATCAAATCGCCACCCATGGTG GTTTCCAAATGGATGTACAGGTTAAAGGTGATTTACACATAGACGATCATCATACGGTTGAAGATACCGCGCTTGCACTT GGTGAAGCCTTTAAAAAGGCACTCGGAGACAAACGTGGTATTGGCCGTTTTGGATTTGTTTTACCTATGGATGAAACAAA AGCCAGTTGTACATTGGATTTATCCGGCCGCCCATACCTTAAATTTAAAGCGGATTTTCCGCGTGAATTAGTCGGTACTA TGTCAACGGAAATGGTTCAACATTTTTTCCATTCCTTAACACAAGCGATGGGCGCAACCTTACACCTTGAAGTTGAAAAG GGTAATACTCACCATATGGTTGAAGGTTTATTCAAAACGTTTGGCCGTACCCTTCGCCAATGTATACAAGTTGTGGGAAC CGACTTACCTTCAAGCAAAGGTGTTTTATGA
Upstream 100 bases:
>100_bases AATAAGCCACGTTTAAAAAACTGTATTCGCATTACTATCGGCACAGAAGCTGAAATGCAGGCAACATTAACCACCTTAAA CTCGCTATAGGAAATAAATA
Downstream 100 bases:
>100_bases ACATAGTCATTATTGATACGGGTTGCGCTAACCTCTCTTCGGTTAGGTTTGCCATCGAACGTTTAGGCTATAGTGTCACC GTCAGTAAAGATCCGGCCAT
Product: imidazole glycerol-phosphate dehydratase/histidinol phosphatase
Products: NA
Alternate protein names: Histidinol-phosphatase; Imidazoleglycerol-phosphate dehydratase; IGPD [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSKQKFLFIDRDGTLIDEPISDKQVDSLEKLIFEPYVIPSLLTLQDAGYILVIVSNQDGLGTDSYPQSDFDIPQNKMMEI FASQGVKFEATLLCPHFTTDNCSCRKPHLGIVSEYLKSGRIDFAHSYVIGDRITDIQLADNMGITGIMYNRETGGWNAIV KQLTSQGRIASVTRTTKETDINVTLDLDHTGENHIDTGMGFFDHMLDQIATHGGFQMDVQVKGDLHIDDHHTVEDTALAL GEAFKKALGDKRGIGRFGFVLPMDETKASCTLDLSGRPYLKFKADFPRELVGTMSTEMVQHFFHSLTQAMGATLHLEVEK GNTHHMVEGLFKTFGRTLRQCIQVVGTDLPSSKGVL
Sequences:
>Translated_356_residues MSKQKFLFIDRDGTLIDEPISDKQVDSLEKLIFEPYVIPSLLTLQDAGYILVIVSNQDGLGTDSYPQSDFDIPQNKMMEI FASQGVKFEATLLCPHFTTDNCSCRKPHLGIVSEYLKSGRIDFAHSYVIGDRITDIQLADNMGITGIMYNRETGGWNAIV KQLTSQGRIASVTRTTKETDINVTLDLDHTGENHIDTGMGFFDHMLDQIATHGGFQMDVQVKGDLHIDDHHTVEDTALAL GEAFKKALGDKRGIGRFGFVLPMDETKASCTLDLSGRPYLKFKADFPRELVGTMSTEMVQHFFHSLTQAMGATLHLEVEK GNTHHMVEGLFKTFGRTLRQCIQVVGTDLPSSKGVL >Mature_355_residues SKQKFLFIDRDGTLIDEPISDKQVDSLEKLIFEPYVIPSLLTLQDAGYILVIVSNQDGLGTDSYPQSDFDIPQNKMMEIF ASQGVKFEATLLCPHFTTDNCSCRKPHLGIVSEYLKSGRIDFAHSYVIGDRITDIQLADNMGITGIMYNRETGGWNAIVK QLTSQGRIASVTRTTKETDINVTLDLDHTGENHIDTGMGFFDHMLDQIATHGGFQMDVQVKGDLHIDDHHTVEDTALALG EAFKKALGDKRGIGRFGFVLPMDETKASCTLDLSGRPYLKFKADFPRELVGTMSTEMVQHFFHSLTQAMGATLHLEVEKG NTHHMVEGLFKTFGRTLRQCIQVVGTDLPSSKGVL
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=353, Percent_Identity=65.4390934844193, Blast_Score=478, Evalue=1e-136, Organism=Escherichia coli, GI1786399, Length=146, Percent_Identity=30.8219178082192, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324776, Length=166, Percent_Identity=46.3855421686747, Blast_Score=151, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006549 - InterPro: IPR020566 - InterPro: IPR005954 - InterPro: IPR006543 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR013954 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD; PF08645 PNK3P [H]
EC number: =3.1.3.15; =4.2.1.19 [H]
Molecular weight: Translated: 39582; Mature: 39450
Theoretical pI: Translated: 5.51; Mature: 5.51
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKQKFLFIDRDGTLIDEPISDKQVDSLEKLIFEPYVIPSLLTLQDAGYILVIVSNQDGL CCCCEEEEEECCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHEECCCCEEEEEEECCCCC GTDSYPQSDFDIPQNKMMEIFASQGVKFEATLLCPHFTTDNCSCRKPHLGIVSEYLKSGR CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCC IDFAHSYVIGDRITDIQLADNMGITGIMYNRETGGWNAIVKQLTSQGRIASVTRTTKETD CEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCE INVTLDLDHTGENHIDTGMGFFDHMLDQIATHGGFQMDVQVKGDLHIDDHHTVEDTALAL EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEECCCCCHHHHHHHH GEAFKKALGDKRGIGRFGFVLPMDETKASCTLDLSGRPYLKFKADFPRELVGTMSTEMVQ HHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHH HFFHSLTQAMGATLHLEVEKGNTHHMVEGLFKTFGRTLRQCIQVVGTDLPSSKGVL HHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SKQKFLFIDRDGTLIDEPISDKQVDSLEKLIFEPYVIPSLLTLQDAGYILVIVSNQDGL CCCEEEEEECCCCEECCCCCCHHHHHHHHHHHCCHHHHHHHEECCCCEEEEEEECCCCC GTDSYPQSDFDIPQNKMMEIFASQGVKFEATLLCPHFTTDNCSCRKPHLGIVSEYLKSGR CCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCC IDFAHSYVIGDRITDIQLADNMGITGIMYNRETGGWNAIVKQLTSQGRIASVTRTTKETD CEEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEEECCCCCE INVTLDLDHTGENHIDTGMGFFDHMLDQIATHGGFQMDVQVKGDLHIDDHHTVEDTALAL EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCEEECCCCCHHHHHHHH GEAFKKALGDKRGIGRFGFVLPMDETKASCTLDLSGRPYLKFKADFPRELVGTMSTEMVQ HHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHH HFFHSLTQAMGATLHLEVEKGNTHHMVEGLFKTFGRTLRQCIQVVGTDLPSSKGVL HHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA