Definition | Psychromonas ingrahamii 37, complete genome. |
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Accession | NC_008709 |
Length | 4,559,598 |
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The map label for this gene is hisC [H]
Identifier: 119945367
GI number: 119945367
Start: 2011902
End: 2012972
Strand: Reverse
Name: hisC [H]
Synonym: Ping_1655
Alternate gene names: 119945367
Gene position: 2012972-2011902 (Counterclockwise)
Preceding gene: 119945368
Following gene: 119945366
Centisome position: 44.15
GC content: 44.26
Gene sequence:
>1071_bases ATGAGCAGCATCAAACACCTTGCCCGTGAAACGGTGCAAGCATTAACACCTTACCTTTCCGCACGTCGCATTGGTGGCAC GGGAGACGTTTGGTTAAACGCGAATGAATCTCCAGACTGCAGTGAATATCAACTCGACTCGAGTAAACTCAATCGCTACC CTGAATTTCAACCACATTCATTAATTACAGCCTATGCCGATTATGCTGCTGTTAAACACAGCCAAGTTTTAAGCACCCGC GGCGCTGATGAAAGTATTGAAATACTGATCCGCACTTTTTGTGAGCCCAGTGCAGACAGTATTTTAATCTGCCCACCAAC CTACGGCATGTATGCAATCAGTGCTGAAACCTGCGGTGTTGCAATTGAAGAGGTCGCCTTAGCAGATAACTTTGATGTTG ATTATCAAGCAGTTGAAAATTCGGTAACAAAAGTCGACAGTCAGGTTAAATTAGTCTTCCTATGTGCGCCTAACAATCCC ACTGGTAATATACTCGACCGGCAGAAACTGATCGCATTGCTGCAGGCAACAAAAGGCAAAGCGTTAATTGTCGCGGATGA AGCCTATATTGAATTTTGTCCCAAATTAAGCCAGGCAGATTTGATTGCACAATATGAAAATCTGGTTATCACCCGAACCC TGTCAAAGGCTTTTGCCCTGGCTGCTATCCGTTGTGGTTTTACTCTGGCACAGGAATCGGTTATTGAGATGTTATCAAAA GTCATTGCGCCTTATCCGGTTCCAGCCCCCGTTGCACAGATCGCCACGCAGGCACTATCAAAAGACGGCTTGGCGGTTAT GTTTGAGCGCGTAAAAATACTTAATAACAACCGCCAACTGTTACAAGATGCACTGCAGGACATTGATTGTGTCACAGAGA TTTTTCAGGCAACCGGTAACTTTTTATTAGTGCGCTTTAAAGACTCAGTAAAAGTATTCGCAGCCTTTGCCAAAAATGGC ATTATTATGCGCGACTTTGCCAATAAGCCACGTTTAAAAAACTGTATTCGCATTACTATCGGCACAGAAGCTGAAATGCA GGCAACATTAACCACCTTAAACTCGCTATAG
Upstream 100 bases:
>100_bases GTTAACTTTTAATAATTTTGGGCAAATGTTGAGTGTTATAAAACAGGCACGCTAACATTTGCCGCGGACATCAGAAATTA TTTGCTAGGGAATAAAATAC
Downstream 100 bases:
>100_bases GAAATAAATAATGAGCAAACAAAAATTTCTATTCATCGATCGTGATGGTACTTTAATTGATGAGCCCATCAGCGACAAAC AGGTTGATAGTTTAGAAAAA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase [H]
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSSIKHLARETVQALTPYLSARRIGGTGDVWLNANESPDCSEYQLDSSKLNRYPEFQPHSLITAYADYAAVKHSQVLSTR GADESIEILIRTFCEPSADSILICPPTYGMYAISAETCGVAIEEVALADNFDVDYQAVENSVTKVDSQVKLVFLCAPNNP TGNILDRQKLIALLQATKGKALIVADEAYIEFCPKLSQADLIAQYENLVITRTLSKAFALAAIRCGFTLAQESVIEMLSK VIAPYPVPAPVAQIATQALSKDGLAVMFERVKILNNNRQLLQDALQDIDCVTEIFQATGNFLLVRFKDSVKVFAAFAKNG IIMRDFANKPRLKNCIRITIGTEAEMQATLTTLNSL
Sequences:
>Translated_356_residues MSSIKHLARETVQALTPYLSARRIGGTGDVWLNANESPDCSEYQLDSSKLNRYPEFQPHSLITAYADYAAVKHSQVLSTR GADESIEILIRTFCEPSADSILICPPTYGMYAISAETCGVAIEEVALADNFDVDYQAVENSVTKVDSQVKLVFLCAPNNP TGNILDRQKLIALLQATKGKALIVADEAYIEFCPKLSQADLIAQYENLVITRTLSKAFALAAIRCGFTLAQESVIEMLSK VIAPYPVPAPVAQIATQALSKDGLAVMFERVKILNNNRQLLQDALQDIDCVTEIFQATGNFLLVRFKDSVKVFAAFAKNG IIMRDFANKPRLKNCIRITIGTEAEMQATLTTLNSL >Mature_355_residues SSIKHLARETVQALTPYLSARRIGGTGDVWLNANESPDCSEYQLDSSKLNRYPEFQPHSLITAYADYAAVKHSQVLSTRG ADESIEILIRTFCEPSADSILICPPTYGMYAISAETCGVAIEEVALADNFDVDYQAVENSVTKVDSQVKLVFLCAPNNPT GNILDRQKLIALLQATKGKALIVADEAYIEFCPKLSQADLIAQYENLVITRTLSKAFALAAIRCGFTLAQESVIEMLSKV IAPYPVPAPVAQIATQALSKDGLAVMFERVKILNNNRQLLQDALQDIDCVTEIFQATGNFLLVRFKDSVKVFAAFAKNGI IMRDFANKPRLKNCIRITIGTEAEMQATLTTLNSL
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=353, Percent_Identity=54.6742209631728, Blast_Score=395, Evalue=1e-111, Organism=Saccharomyces cerevisiae, GI6322075, Length=369, Percent_Identity=32.2493224932249, Blast_Score=168, Evalue=1e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 39068; Mature: 38937
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIKHLARETVQALTPYLSARRIGGTGDVWLNANESPDCSEYQLDSSKLNRYPEFQPHS CCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEECCHHHHCCCCCCCCCH LITAYADYAAVKHSQVLSTRGADESIEILIRTFCEPSADSILICPPTYGMYAISAETCGV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECHHHCH AIEEVALADNFDVDYQAVENSVTKVDSQVKLVFLCAPNNPTGNILDRQKLIALLQATKGK HHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC ALIVADEAYIEFCPKLSQADLIAQYENLVITRTLSKAFALAAIRCGFTLAQESVIEMLSK EEEEECHHHHHHCCCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHH VIAPYPVPAPVAQIATQALSKDGLAVMFERVKILNNNRQLLQDALQDIDCVTEIFQATGN HHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC FLLVRFKDSVKVFAAFAKNGIIMRDFANKPRLKNCIRITIGTEAEMQATLTTLNSL EEEEEECCHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure SSIKHLARETVQALTPYLSARRIGGTGDVWLNANESPDCSEYQLDSSKLNRYPEFQPHS CHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEECCHHHHCCCCCCCCCH LITAYADYAAVKHSQVLSTRGADESIEILIRTFCEPSADSILICPPTYGMYAISAETCGV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECHHHCH AIEEVALADNFDVDYQAVENSVTKVDSQVKLVFLCAPNNPTGNILDRQKLIALLQATKGK HHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCC ALIVADEAYIEFCPKLSQADLIAQYENLVITRTLSKAFALAAIRCGFTLAQESVIEMLSK EEEEECHHHHHHCCCCCHHHHHHHHHHEEEEHHHHHHHHHHHHHHCHHHHHHHHHHHHHH VIAPYPVPAPVAQIATQALSKDGLAVMFERVKILNNNRQLLQDALQDIDCVTEIFQATGN HHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC FLLVRFKDSVKVFAAFAKNGIIMRDFANKPRLKNCIRITIGTEAEMQATLTTLNSL EEEEEECCHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA