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The map label for this gene is insF1 [H]

Identifier: 119944937

GI number: 119944937

Start: 1474653

End: 1475483

Strand: Direct

Name: insF1 [H]

Synonym: Ping_1183

Alternate gene names: 119944937

Gene position: 1474653-1475483 (Clockwise)

Preceding gene: 119944936

Following gene: 119944938

Centisome position: 32.34

GC content: 38.75

Gene sequence:

>831_bases
GTGCGCGTTATCTGCCCCTTAATTGGTGTCGAAATTCGCAATTATTACAGTTACTTAAAACGTCGTGAAACAAAAAAGTT
CGATCCAGATCATGGCGACATGATTGAAATGATACAAAAAATATCAGAGAGCAGCGATCACACCTATGGCAGCCGTCGAA
TGCAGAAAAGCTTAAATGCATTGAGCTTCCCAGTTGGACGCTGGAAAACAGCACAATTAATGAAAGAAGCAGGCGTTTGG
GTTCGTTATAAAAAGAAATATAAAGTGACGACAAACAGTGAGCATAAGAAACCTGTTTATAAAAATGTACTTAAGCAAAA
CTTCAAATACGATCAGCCAAATAAAGCTTATGTTGGCGATATAACCTATATTTGGACAACCGAGGGCTGGTTATATCTTG
CTGTTATCATTGACTTATATTCGAGAAAAGTGGTTGGCTGGAGCATGTCATCACGAATGAAGGCAAGTCTTGTATGTGAT
GCATTAACCAGGGCTATTTGGCAACGAAACCCACCTCCAGGGCTTATTGTTCATTCAGATCAAGGTGTTCAATATGCAAG
TGACCAATATCGTAAATTGCTTAAGAGTCATAATTTTATTGGGAGCATGAGCAAAAAAGGTTGTTGTTGGGATAATGCTG
TCGCTGAAAGCTTTTTTGGCAGTCTAAAGCAGGAAAGAGTGCATTGGAATAATTACGCTACTCGCTATGAAGCACAACAA
GATATATTGCATTACATAACCATGTGGTACAACAGCAATCGTCTTCATTCATACTTAGGTTATTGTTGCCCAAGCACTTT
TGAAATGATGAACGGGTATTTGAAAAAGTAG

Upstream 100 bases:

>100_bases
CTTAAAATGGAGCGTGAAATTTTAAAAAAGCGACGGTCTTCTTTGCAAAAGAAGCGAAATAAAGTATTCGTTTATTACTG
AGCATAAGAAGACCTGGCCA

Downstream 100 bases:

>100_bases
CTTAACTAGGGTGAGTGAATTTAGTTGACCACGTCACTACCAGCTTGACCGGAACTTACTCATAGGTGGCCCTCGCCCCT
CGTTTTACCTAACTTCTTAA

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MRVICPLIGVEIRNYYSYLKRRETKKFDPDHGDMIEMIQKISESSDHTYGSRRMQKSLNALSFPVGRWKTAQLMKEAGVW
VRYKKKYKVTTNSEHKKPVYKNVLKQNFKYDQPNKAYVGDITYIWTTEGWLYLAVIIDLYSRKVVGWSMSSRMKASLVCD
ALTRAIWQRNPPPGLIVHSDQGVQYASDQYRKLLKSHNFIGSMSKKGCCWDNAVAESFFGSLKQERVHWNNYATRYEAQQ
DILHYITMWYNSNRLHSYLGYCCPSTFEMMNGYLKK

Sequences:

>Translated_276_residues
MRVICPLIGVEIRNYYSYLKRRETKKFDPDHGDMIEMIQKISESSDHTYGSRRMQKSLNALSFPVGRWKTAQLMKEAGVW
VRYKKKYKVTTNSEHKKPVYKNVLKQNFKYDQPNKAYVGDITYIWTTEGWLYLAVIIDLYSRKVVGWSMSSRMKASLVCD
ALTRAIWQRNPPPGLIVHSDQGVQYASDQYRKLLKSHNFIGSMSKKGCCWDNAVAESFFGSLKQERVHWNNYATRYEAQQ
DILHYITMWYNSNRLHSYLGYCCPSTFEMMNGYLKK
>Mature_276_residues
MRVICPLIGVEIRNYYSYLKRRETKKFDPDHGDMIEMIQKISESSDHTYGSRRMQKSLNALSFPVGRWKTAQLMKEAGVW
VRYKKKYKVTTNSEHKKPVYKNVLKQNFKYDQPNKAYVGDITYIWTTEGWLYLAVIIDLYSRKVVGWSMSSRMKASLVCD
ALTRAIWQRNPPPGLIVHSDQGVQYASDQYRKLLKSHNFIGSMSKKGCCWDNAVAESFFGSLKQERVHWNNYATRYEAQQ
DILHYITMWYNSNRLHSYLGYCCPSTFEMMNGYLKK

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=237, Percent_Identity=34.1772151898734, Blast_Score=144, Evalue=1e-34,
Organism=Escherichia coli, GI1788405, Length=274, Percent_Identity=40.1459854014599, Blast_Score=210, Evalue=7e-56,
Organism=Escherichia coli, GI1787263, Length=274, Percent_Identity=40.1459854014599, Blast_Score=210, Evalue=7e-56,
Organism=Escherichia coli, GI1786753, Length=274, Percent_Identity=40.1459854014599, Blast_Score=210, Evalue=7e-56,
Organism=Escherichia coli, GI1786570, Length=274, Percent_Identity=40.1459854014599, Blast_Score=210, Evalue=7e-56,
Organism=Escherichia coli, GI1786490, Length=274, Percent_Identity=40.1459854014599, Blast_Score=210, Evalue=7e-56,
Organism=Escherichia coli, GI1789981, Length=241, Percent_Identity=32.3651452282158, Blast_Score=123, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 32481; Mature: 32481

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVICPLIGVEIRNYYSYLKRRETKKFDPDHGDMIEMIQKISESSDHTYGSRRMQKSLNA
CEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LSFPVGRWKTAQLMKEAGVWVRYKKKYKVTTNSEHKKPVYKNVLKQNFKYDQPNKAYVGD
HHCCCCCHHHHHHHHHCCCEEEEECEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEECC
ITYIWTTEGWLYLAVIIDLYSRKVVGWSMSSRMKASLVCDALTRAIWQRNPPPGLIVHSD
EEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
QGVQYASDQYRKLLKSHNFIGSMSKKGCCWDNAVAESFFGSLKQERVHWNNYATRYEAQQ
CCCCHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILHYITMWYNSNRLHSYLGYCCPSTFEMMNGYLKK
HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MRVICPLIGVEIRNYYSYLKRRETKKFDPDHGDMIEMIQKISESSDHTYGSRRMQKSLNA
CEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH
LSFPVGRWKTAQLMKEAGVWVRYKKKYKVTTNSEHKKPVYKNVLKQNFKYDQPNKAYVGD
HHCCCCCHHHHHHHHHCCCEEEEECEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEECC
ITYIWTTEGWLYLAVIIDLYSRKVVGWSMSSRMKASLVCDALTRAIWQRNPPPGLIVHSD
EEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECC
QGVQYASDQYRKLLKSHNFIGSMSKKGCCWDNAVAESFFGSLKQERVHWNNYATRYEAQQ
CCCCHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DILHYITMWYNSNRLHSYLGYCCPSTFEMMNGYLKK
HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]