| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is insN1 [C]
Identifier: 119944936
GI number: 119944936
Start: 1474322
End: 1474633
Strand: Direct
Name: insN1 [C]
Synonym: Ping_1182
Alternate gene names: 119944936
Gene position: 1474322-1474633 (Clockwise)
Preceding gene: 119944934
Following gene: 119944937
Centisome position: 32.33
GC content: 36.22
Gene sequence:
>312_bases ATGACAACACGTAAAAAATATTCAAAAGAATTTAAATTAGATGCAATATCGCTCGTCAATGAGCAAGGTTACAACAATGC TGAAGCCTCTAGAAACCTAGGTATTAGCCCAAGTTTACTGGGTAAATGGATTAGAGAAGCCGAAAAAGGCGACGGCCTCG CTTTCAGAGGCAATGGTAAATTAACGCCCGAACAATTAGAAATCCGTCAACTCAAAAAAGAAAATAGAAAACTTAAAATG GAGCGTGAAATTTTAAAAAAGCGACGGTCTTCTTTGCAAAAGAAGCGAAATAAAGTATTCGTTTATTACTGA
Upstream 100 bases:
>100_bases TCAAAACATCTCTGTCTAGTTCAATAATTGCAACAATGACGTGGTTTAATAGATTCACACACCCCAGTTAGGACATAATG AACTTAACTGTAGAAACAGA
Downstream 100 bases:
>100_bases GCATAAGAAGACCTGGCCAGTGCGCGTTATCTGCCCCTTAATTGGTGTCGAAATTCGCAATTATTACAGTTACTTAAAAC GTCGTGAAACAAAAAAGTTC
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: Transposase IS3/IS; Transposase IS; Transposon Related ORF HTH Transcriptional Regulator; Transposase Tra5 Related Protein
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTTRKKYSKEFKLDAISLVNEQGYNNAEASRNLGISPSLLGKWIREAEKGDGLAFRGNGKLTPEQLEIRQLKKENRKLKM EREILKKRRSSLQKKRNKVFVYY
Sequences:
>Translated_103_residues MTTRKKYSKEFKLDAISLVNEQGYNNAEASRNLGISPSLLGKWIREAEKGDGLAFRGNGKLTPEQLEIRQLKKENRKLKM EREILKKRRSSLQKKRNKVFVYY >Mature_102_residues TTRKKYSKEFKLDAISLVNEQGYNNAEASRNLGISPSLLGKWIREAEKGDGLAFRGNGKLTPEQLEIRQLKKENRKLKME REILKKRRSSLQKKRNKVFVYY
Specific function: Involved in the transposition of the insertion sequence is911 [C]
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12089; Mature: 11958
Theoretical pI: Translated: 10.94; Mature: 10.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRKKYSKEFKLDAISLVNEQGYNNAEASRNLGISPSLLGKWIREAEKGDGLAFRGNGK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCC LTPEQLEIRQLKKENRKLKMEREILKKRRSSLQKKRNKVFVYY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC >Mature Secondary Structure TTRKKYSKEFKLDAISLVNEQGYNNAEASRNLGISPSLLGKWIREAEKGDGLAFRGNGK CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCC LTPEQLEIRQLKKENRKLKMEREILKKRRSSLQKKRNKVFVYY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA