| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is hisC1 [H]
Identifier: 119944873
GI number: 119944873
Start: 1399716
End: 1400828
Strand: Direct
Name: hisC1 [H]
Synonym: Ping_1116
Alternate gene names: 119944873
Gene position: 1399716-1400828 (Clockwise)
Preceding gene: 119944872
Following gene: 119944874
Centisome position: 30.7
GC content: 43.85
Gene sequence:
>1113_bases ATGAGCTGTGATTTTTTAACGCTTGCTAATGCGGGGGTGCAAAAACTGCATCCCTACCAAGCCGGTAAACCAACGTCTGA ATTAGAACGAGAACTTGGCATCAGTGATATTGTCAAACTTGCTTCCAATGAAAATCCGTTAGGTCTGAGTGAGAAAGTGA AATCTGCACTGCAAAGTGAATTTTCTGAATTAGCCCGTTATCCAGATGCCAACGGTTTTTACCTTAAGCAGGCACTTGCC GATAAATATAACGTCGGGTTAAATCAGGTGACCCTAGGAAACGGCTCAAATGATTTGCTTGAACTGGTTGCGCGGGCATT TGTAAGCGCTGAAAATGAAGTGATATTTGCGCAGTTTGCTTTTGTTGTTTATCCAATAGTGACACAAGCGATTGGCGCAA AAGCAGTGGTTGTTCCGGCAAAGCATTACGGTCATGATTTAGCGGCAATGGCCGCTGCCGTGACGGATAAAACAAAACTT ATCTTTATTGCCAATCCGAATAACCCAACGGGCACTTTTCTAGAAGCGGCTGACATTCTAGCCTTTCTGAGTAAGGTGCC GGCGCATGTCTTAGTCGTATTGGATGAGGCCTATTTTGAATATGCAGCGCCCGAACGACGTGGTAATGCTATCGCATGGA TTAAAGATTTTCCCAATTTAATTGTTTCCCGAACCTTCTCAAAAGCCTATGGTCTTGCGGGCTTGCGTGTCGGTTACAGC GTTTCAAATCCGCAAATTGCAGATATCCTTAATCGCGTACGCCAACCCTTTAACTGTAATGCTCTAGCGCTTAAAGCGGC AGAGACCGTTTTACAAGATGATGAGTATTTACAGGCGGGGATTAAGTTAAATAATGCGGGCATGGCAGACTTAAGTGCTT TTTTCAGTCAACATAACCTTGAATATATTCCTTCAATGGGAAACTTTATTACGGTCAATGTTGGCCAATCTGGGGACGTT GTCTATCAGGCGTTATTACATGAAGGTGTGATTGTACGCCCGATAACGGGCTACGGCTTAAGCGACCATCTGCGTATTAG CATCGGCCTGTTCGATGAAAACCAGCGTTTTAAACAAGCCTTAGTTAAAGTGCTTAAGTTAGATCAAAAATAG
Upstream 100 bases:
>100_bases GCACTTAAAAAGTTCCCTAAAACCATCCAGTTTAAACACCCTCAGTAGAGGGGGTGATAATCGGTTAATACAAATTGCTA TTAGAAACTAAGGATTAAAG
Downstream 100 bases:
>100_bases AGGATAGGATGGAACAATTATTATTACAGCCAATTGCTAAGGTGGACGGTGAAATTAACCTACCTGGCTCTAAGAGCCTT TCTAATCGTGCGCTTTTGCT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1 [H]
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MSCDFLTLANAGVQKLHPYQAGKPTSELERELGISDIVKLASNENPLGLSEKVKSALQSEFSELARYPDANGFYLKQALA DKYNVGLNQVTLGNGSNDLLELVARAFVSAENEVIFAQFAFVVYPIVTQAIGAKAVVVPAKHYGHDLAAMAAAVTDKTKL IFIANPNNPTGTFLEAADILAFLSKVPAHVLVVLDEAYFEYAAPERRGNAIAWIKDFPNLIVSRTFSKAYGLAGLRVGYS VSNPQIADILNRVRQPFNCNALALKAAETVLQDDEYLQAGIKLNNAGMADLSAFFSQHNLEYIPSMGNFITVNVGQSGDV VYQALLHEGVIVRPITGYGLSDHLRISIGLFDENQRFKQALVKVLKLDQK
Sequences:
>Translated_370_residues MSCDFLTLANAGVQKLHPYQAGKPTSELERELGISDIVKLASNENPLGLSEKVKSALQSEFSELARYPDANGFYLKQALA DKYNVGLNQVTLGNGSNDLLELVARAFVSAENEVIFAQFAFVVYPIVTQAIGAKAVVVPAKHYGHDLAAMAAAVTDKTKL IFIANPNNPTGTFLEAADILAFLSKVPAHVLVVLDEAYFEYAAPERRGNAIAWIKDFPNLIVSRTFSKAYGLAGLRVGYS VSNPQIADILNRVRQPFNCNALALKAAETVLQDDEYLQAGIKLNNAGMADLSAFFSQHNLEYIPSMGNFITVNVGQSGDV VYQALLHEGVIVRPITGYGLSDHLRISIGLFDENQRFKQALVKVLKLDQK >Mature_369_residues SCDFLTLANAGVQKLHPYQAGKPTSELERELGISDIVKLASNENPLGLSEKVKSALQSEFSELARYPDANGFYLKQALAD KYNVGLNQVTLGNGSNDLLELVARAFVSAENEVIFAQFAFVVYPIVTQAIGAKAVVVPAKHYGHDLAAMAAAVTDKTKLI FIANPNNPTGTFLEAADILAFLSKVPAHVLVVLDEAYFEYAAPERRGNAIAWIKDFPNLIVSRTFSKAYGLAGLRVGYSV SNPQIADILNRVRQPFNCNALALKAAETVLQDDEYLQAGIKLNNAGMADLSAFFSQHNLEYIPSMGNFITVNVGQSGDVV YQALLHEGVIVRPITGYGLSDHLRISIGLFDENQRFKQALVKVLKLDQK
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=374, Percent_Identity=26.4705882352941, Blast_Score=127, Evalue=9e-31, Organism=Escherichia coli, GI1786816, Length=231, Percent_Identity=23.8095238095238, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322075, Length=403, Percent_Identity=24.5657568238213, Blast_Score=104, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001176 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 40295; Mature: 40163
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCDFLTLANAGVQKLHPYQAGKPTSELERELGISDIVKLASNENPLGLSEKVKSALQSE CCCCEEECCCCCHHHCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHH FSELARYPDANGFYLKQALADKYNVGLNQVTLGNGSNDLLELVARAFVSAENEVIFAQFA HHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEHHHHH FVVYPIVTQAIGAKAVVVPAKHYGHDLAAMAAAVTDKTKLIFIANPNNPTGTFLEAADIL HHHHHHHHHHCCCCEEEECHHHHCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH AFLSKVPAHVLVVLDEAYFEYAAPERRGNAIAWIKDFPNLIVSRTFSKAYGLAGLRVGYS HHHHHCCHHEEEEEHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEECCC VSNPQIADILNRVRQPFNCNALALKAAETVLQDDEYLQAGIKLNNAGMADLSAFFSQHNL CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCEECCCCHHHHHHHHHHCCC EYIPSMGNFITVNVGQSGDVVYQALLHEGVIVRPITGYGLSDHLRISIGLFDENQRFKQA CCCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHH LVKVLKLDQK HHHHHHCCCC >Mature Secondary Structure SCDFLTLANAGVQKLHPYQAGKPTSELERELGISDIVKLASNENPLGLSEKVKSALQSE CCCEEECCCCCHHHCCCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHH FSELARYPDANGFYLKQALADKYNVGLNQVTLGNGSNDLLELVARAFVSAENEVIFAQFA HHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEHHHHH FVVYPIVTQAIGAKAVVVPAKHYGHDLAAMAAAVTDKTKLIFIANPNNPTGTFLEAADIL HHHHHHHHHHCCCCEEEECHHHHCCHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHH AFLSKVPAHVLVVLDEAYFEYAAPERRGNAIAWIKDFPNLIVSRTFSKAYGLAGLRVGYS HHHHHCCHHEEEEEHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCEEECCC VSNPQIADILNRVRQPFNCNALALKAAETVLQDDEYLQAGIKLNNAGMADLSAFFSQHNL CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCEECCCCHHHHHHHHHHCCC EYIPSMGNFITVNVGQSGDVVYQALLHEGVIVRPITGYGLSDHLRISIGLFDENQRFKQA CCCCCCCCEEEEEECCCCHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEEECCCHHHHHH LVKVLKLDQK HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA