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The map label for this gene is yohJ [C]

Identifier: 119944824

GI number: 119944824

Start: 1341036

End: 1341446

Strand: Direct

Name: yohJ [C]

Synonym: Ping_1066

Alternate gene names: 119944824

Gene position: 1341036-1341446 (Clockwise)

Preceding gene: 119944822

Following gene: 119944825

Centisome position: 29.41

GC content: 31.63

Gene sequence:

>411_bases
ATGATGAACTTTAACAATCTCTTTTTACAATTAAAAAACGTTAACATATTTGGGAAAATTGTTGATTTTTCAAGAGGTTT
TTTGATAATTTTATTATTTTTAAGTGTTGGTAAAATAATCAGTAGTTATCTGCCCTTTGCCTTTCCAGGCAGTATTATCG
GGTTGATTTTGCTGTTTTCGGCATTGAATTTGCGACTTATCAAAGTTGAATGGATAATGATGTCTGGCTCCCTGCTGCTA
AAGTATATGGCCCTCTTATTTGTCCCTATCGGTGTCGGGTTAATCAATCATTTAGCGCTTATTTTTGACAATTGGTTTGT
GATTACATTTTCATTTTTCTTTACAACCTTATTAATTCTTTTATCCGTGGGGCATTTGTACCAGTTTTTAAATAAAAAAG
AGGATCTTTAA

Upstream 100 bases:

>100_bases
AGGTGAATTTTTTGATTCAGATAAACAAAGTTATTATCCTTCAATTCAGTCTTTCGATATAATATACAAATCTTCTAAAA
ATTAATAGATTCAATATAAT

Downstream 100 bases:

>100_bases
TATGCTGTTCTATCTGGCCCTGCCCTGCACCTTAGTAATATTTTTTGCCAGTAAAGCGTTATACGCAATTAAACCCTGGG
CAATATTCCATCCCTTTGTA

Product: LrgA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MMNFNNLFLQLKNVNIFGKIVDFSRGFLIILLFLSVGKIISSYLPFAFPGSIIGLILLFSALNLRLIKVEWIMMSGSLLL
KYMALLFVPIGVGLINHLALIFDNWFVITFSFFFTTLLILLSVGHLYQFLNKKEDL

Sequences:

>Translated_136_residues
MMNFNNLFLQLKNVNIFGKIVDFSRGFLIILLFLSVGKIISSYLPFAFPGSIIGLILLFSALNLRLIKVEWIMMSGSLLL
KYMALLFVPIGVGLINHLALIFDNWFVITFSFFFTTLLILLSVGHLYQFLNKKEDL
>Mature_136_residues
MMNFNNLFLQLKNVNIFGKIVDFSRGFLIILLFLSVGKIISSYLPFAFPGSIIGLILLFSALNLRLIKVEWIMMSGSLLL
KYMALLFVPIGVGLINHLALIFDNWFVITFSFFFTTLLILLSVGHLYQFLNKKEDL

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=125, Percent_Identity=35.2, Blast_Score=73, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 15557; Mature: 15557

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNFNNLFLQLKNVNIFGKIVDFSRGFLIILLFLSVGKIISSYLPFAFPGSIIGLILLFS
CCCHHHHEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALNLRLIKVEWIMMSGSLLLKYMALLFVPIGVGLINHLALIFDNWFVITFSFFFTTLLIL
HHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVGHLYQFLNKKEDL
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMNFNNLFLQLKNVNIFGKIVDFSRGFLIILLFLSVGKIISSYLPFAFPGSIIGLILLFS
CCCHHHHEEEEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALNLRLIKVEWIMMSGSLLLKYMALLFVPIGVGLINHLALIFDNWFVITFSFFFTTLLIL
HHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSVGHLYQFLNKKEDL
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA